RNA–Protein interactions for RNA: ENST00000425703.5

MSH5-207, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-207ENST00000425703 POLR2J2Q9GZM3 115 aaKnown RBP16.24■□□□□ 0.19
MSH5-207ENST00000425703 POLR2J3Q9H1A7 115 aaKnown RBP16.24■□□□□ 0.19
MSH5-207ENST00000425703 SLC25A15Q9Y619 301 aa16.24■□□□□ 0.19
MSH5-207ENST00000425703 MAP1AP78559 2803 aaPredicted RBP16.24■□□□□ 0.19
MSH5-207ENST00000425703 PRR14LQ5THK1 2151 aa16.24■□□□□ 0.19
MSH5-207ENST00000425703 TRAPPC13A5PLN9 417 aa16.23■□□□□ 0.19
MSH5-207ENST00000425703 DPRXA6NFQ7 191 aa16.23■□□□□ 0.19
MSH5-207ENST00000425703 SMPD2O60906 423 aa16.23■□□□□ 0.19
MSH5-207ENST00000425703 PLAUP00749 431 aa16.23■□□□□ 0.19
MSH5-207ENST00000425703 MT-ATP6P00846 226 aa16.23■□□□□ 0.19
MSH5-207ENST00000425703 BGLAPP02818 100 aa16.23■□□□□ 0.19
MSH5-207ENST00000425703 HOXC12P31275 282 aa16.23■□□□□ 0.19
MSH5-207ENST00000425703 FOXG1P55316 489 aaPredicted RBP16.23■□□□□ 0.19
MSH5-207ENST00000425703 HACD2Q6Y1H2 254 aa16.23■□□□□ 0.19
MSH5-207ENST00000425703 RBM45Q8IUH3 476 aaKnown RBP16.23■□□□□ 0.19
MSH5-207ENST00000425703 P3H2Q8IVL5 708 aa16.23■□□□□ 0.19
MSH5-207ENST00000425703 POU5F2Q8N7G0 328 aa16.23■□□□□ 0.19
MSH5-207ENST00000425703 OR4D11Q8NGI4 311 aa16.23■□□□□ 0.19
MSH5-207ENST00000425703 RADILQ96JH8 1075 aa16.23■□□□□ 0.19
MSH5-207ENST00000425703 ELAC2Q9BQ52 826 aaKnown RBP16.23■□□□□ 0.19
MSH5-207ENST00000425703 TMUB1Q9BVT8 246 aa16.23■□□□□ 0.19
MSH5-207ENST00000425703 SLC19A3Q9BZV2 496 aa16.23■□□□□ 0.19
MSH5-207ENST00000425703 NSRP1Q9H0G5 558 aaKnown RBP16.23■□□□□ 0.19
MSH5-207ENST00000425703 EFCAB1Q9HAE3 211 aa16.23■□□□□ 0.19
MSH5-207ENST00000425703 MRPL39Q9NYK5 338 aaKnown RBP16.23■□□□□ 0.19
MSH5-207ENST00000425703 SEC14L4Q9UDX3 406 aa16.23■□□□□ 0.19
MSH5-207ENST00000425703 AMDHD2Q9Y303 409 aa16.23■□□□□ 0.19
MSH5-207ENST00000425703 CPSF4LA6NMK7 179 aaKnown RBP16.22■□□□□ 0.19
MSH5-207ENST00000425703 ZNF587BE7ETH6 402 aa16.22■□□□□ 0.19
MSH5-207ENST00000425703 NDUFAB1O14561 156 aa16.22■□□□□ 0.19
MSH5-207ENST00000425703 AKAP8O43823 692 aaKnown RBP16.22■□□□□ 0.19
MSH5-207ENST00000425703 KRT33AO76009 404 aa16.22■□□□□ 0.19
MSH5-207ENST00000425703 ZNF432O94892 652 aa16.22■□□□□ 0.19
MSH5-207ENST00000425703 LYPD3O95274 346 aa16.22■□□□□ 0.19
MSH5-207ENST00000425703 PAX1P15863 534 aa16.22■□□□□ 0.19
MSH5-207ENST00000425703 PAX7P23759 505 aa16.22■□□□□ 0.19
MSH5-207ENST00000425703 SELENOPP49908 381 aa16.22■□□□□ 0.19
MSH5-207ENST00000425703 SEC24CP53992 1094 aa16.22■□□□□ 0.19
MSH5-207ENST00000425703 ADAM8P78325 824 aa16.22■□□□□ 0.19
MSH5-207ENST00000425703 C1DQ13901 141 aaKnown RBP16.22■□□□□ 0.19
MSH5-207ENST00000425703 SHEQ5VZ18 495 aa16.22■□□□□ 0.19
MSH5-207ENST00000425703 NIPAL3Q6P499 406 aa16.22■□□□□ 0.19
MSH5-207ENST00000425703 KLHL17Q6TDP4 642 aa16.22■□□□□ 0.19
MSH5-207ENST00000425703 TMEM108Q6UXF1 575 aa16.22■□□□□ 0.19
MSH5-207ENST00000425703 SLC15A3Q8IY34 581 aa16.22■□□□□ 0.19
MSH5-207ENST00000425703 KDM8Q8N371 416 aa16.22■□□□□ 0.19
MSH5-207ENST00000425703 LILRB1Q8NHL6 650 aaPredicted RBP16.22■□□□□ 0.19
MSH5-207ENST00000425703 VANGL1Q8TAA9 524 aaPredicted RBP16.22■□□□□ 0.19
MSH5-207ENST00000425703 AKAP1Q92667 903 aaKnown RBP eCLIP16.22■□□□□ 0.19
MSH5-207ENST00000425703 CMTM5Q96DZ9 223 aa16.22■□□□□ 0.19
MSH5-207ENST00000425703 ZNF426Q9BUY5 554 aa16.22■□□□□ 0.19
MSH5-207ENST00000425703 ASPNQ9BXN1 380 aa16.22■□□□□ 0.19
MSH5-207ENST00000425703 MYLK2Q9H1R3 596 aa16.22■□□□□ 0.19
MSH5-207ENST00000425703 OBP2BQ9NPH6 170 aa16.22■□□□□ 0.19
MSH5-207ENST00000425703 SLC17A5Q9NRA2 495 aa16.22■□□□□ 0.19
MSH5-207ENST00000425703 CMTM6Q9NX76 183 aa16.22■□□□□ 0.19
MSH5-207ENST00000425703 NPAP1Q9NZP6 1156 aa16.22■□□□□ 0.19
MSH5-207ENST00000425703 MGAT4BQ9UQ53 548 aa16.22■□□□□ 0.19
MSH5-207ENST00000425703 MAGED1Q9Y5V3 778 aaPredicted RBP16.22■□□□□ 0.19
MSH5-207ENST00000425703 ELOVL7A1L3X0 281 aa16.21■□□□□ 0.19
MSH5-207ENST00000425703 RPL36A-HNRNPH2H7BZ11 118 aa16.21■□□□□ 0.19
MSH5-207ENST00000425703 CLOCKO15516 846 aa16.21■□□□□ 0.19
MSH5-207ENST00000425703 ARHGEF9O43307 516 aa16.21■□□□□ 0.19
MSH5-207ENST00000425703 SNX3O60493 162 aa16.21■□□□□ 0.19
MSH5-207ENST00000425703 THY1P04216 161 aa16.21■□□□□ 0.19
MSH5-207ENST00000425703 NQO1P15559 274 aaKnown RBP16.21■□□□□ 0.19
MSH5-207ENST00000425703 PTAFRP25105 342 aa16.21■□□□□ 0.19
MSH5-207ENST00000425703 LSP1P33241 339 aa16.21■□□□□ 0.19
MSH5-207ENST00000425703 KDELR2P33947 212 aa16.21■□□□□ 0.19
MSH5-207ENST00000425703 CLDN17P56750 224 aa16.21■□□□□ 0.19
MSH5-207ENST00000425703 LTBQ06643 244 aa16.21■□□□□ 0.19
MSH5-207ENST00000425703 ZNF672Q499Z4 452 aaPredicted RBP16.21■□□□□ 0.19
MSH5-207ENST00000425703 C8orf82Q6P1X6 216 aaPredicted RBP16.21■□□□□ 0.19
MSH5-207ENST00000425703 CARM1Q86X55 608 aa16.21■□□□□ 0.19
MSH5-207ENST00000425703 TREML1Q86YW5 311 aa16.21■□□□□ 0.19
MSH5-207ENST00000425703 MICU2Q8IYU8 434 aa16.21■□□□□ 0.19
MSH5-207ENST00000425703 WDR31Q8NA23 367 aa16.21■□□□□ 0.19
MSH5-207ENST00000425703 OR52N5Q8NH56 324 aa16.21■□□□□ 0.19
MSH5-207ENST00000425703 FBXW5Q969U6 566 aa16.21■□□□□ 0.19
MSH5-207ENST00000425703 USP22Q9UPT9 525 aa16.21■□□□□ 0.19
MSH5-207ENST00000425703 SH3GLB1Q9Y371 365 aa16.21■□□□□ 0.19
MSH5-207ENST00000425703 NOX1Q9Y5S8 564 aa16.21■□□□□ 0.19
MSH5-207ENST00000425703 MTORP42345 2549 aa16.21■□□□□ 0.19
MSH5-207ENST00000425703 RAI1Q7Z5J4 1906 aaPredicted RBP16.21■□□□□ 0.19
MSH5-207ENST00000425703 GMNCA6NCL1 334 aa16.2■□□□□ 0.18
MSH5-207ENST00000425703 MS4A18H0YCH9 400 aa16.2■□□□□ 0.18
MSH5-207ENST00000425703 TRAF3IP2O43734 574 aaPredicted RBP16.2■□□□□ 0.18
MSH5-207ENST00000425703 SLC43A1O75387 559 aa16.2■□□□□ 0.18
MSH5-207ENST00000425703 CD99P14209 185 aa16.2■□□□□ 0.18
MSH5-207ENST00000425703 PRDX6P30041 224 aa16.2■□□□□ 0.18
MSH5-207ENST00000425703 SH3BGRP55822 239 aaPredicted RBP16.2■□□□□ 0.18
MSH5-207ENST00000425703 NKX6-1P78426 367 aaPredicted RBP16.2■□□□□ 0.18
MSH5-207ENST00000425703 PUDPQ08623 228 aa16.2■□□□□ 0.18
MSH5-207ENST00000425703 PMS2P3Q13401 168 aa16.2■□□□□ 0.18
MSH5-207ENST00000425703 MS4A18Q3C1V0 323 aa16.2■□□□□ 0.18
MSH5-207ENST00000425703 CYBRD1Q53TN4 286 aa16.2■□□□□ 0.18
MSH5-207ENST00000425703 TTC33Q6PID6 262 aaPredicted RBP16.2■□□□□ 0.18
MSH5-207ENST00000425703 PRSS57Q6UWY2 283 aa16.2■□□□□ 0.18
MSH5-207ENST00000425703 WDR88Q6ZMY6 472 aa16.2■□□□□ 0.18
MSH5-207ENST00000425703 TSPYL5Q86VY4 417 aaPredicted RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms