RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 EFR3AQ14156 821 aa12.19□□□□□ -0.46
MCF2L-213ENST00000421756 MRGPREQ86SM8 312 aa12.19□□□□□ -0.46
MCF2L-213ENST00000421756 C1orf216Q8TAB5 229 aa12.19□□□□□ -0.46
MCF2L-213ENST00000421756 STACQ99469 402 aa12.19□□□□□ -0.46
MCF2L-213ENST00000421756 MRPS18AQ9NVS2 196 aaKnown RBP12.19□□□□□ -0.46
MCF2L-213ENST00000421756 RCE1Q9Y256 329 aa12.19□□□□□ -0.46
MCF2L-213ENST00000421756 KHDRBS3O75525 346 aaKnown RBP12.18□□□□□ -0.46
MCF2L-213ENST00000421756 ANKRD34CP0C6C1 535 aa12.18□□□□□ -0.46
MCF2L-213ENST00000421756 IL12BP29460 328 aa12.18□□□□□ -0.46
MCF2L-213ENST00000421756 PLA2G7Q13093 441 aa12.18□□□□□ -0.46
MCF2L-213ENST00000421756 ZNF613Q6PF04 617 aa12.18□□□□□ -0.46
MCF2L-213ENST00000421756 SNAPC3Q92966 411 aa12.18□□□□□ -0.46
MCF2L-213ENST00000421756 NUDT22Q9BRQ3 303 aa12.18□□□□□ -0.46
MCF2L-213ENST00000421756 TBL1XR1Q9BZK7 514 aa12.18□□□□□ -0.46
MCF2L-213ENST00000421756 MED17Q9NVC6 651 aa12.18□□□□□ -0.46
MCF2L-213ENST00000421756 H3BML4 177 aa12.18□□□□□ -0.46
MCF2L-213ENST00000421756 YES1P07947 543 aa12.18□□□□□ -0.46
MCF2L-213ENST00000421756 PRKCAP17252 672 aa12.18□□□□□ -0.46
MCF2L-213ENST00000421756 FNTBP49356 437 aa12.18□□□□□ -0.46
MCF2L-213ENST00000421756 BLKP51451 505 aa12.18□□□□□ -0.46
MCF2L-213ENST00000421756 RPS15P62841 145 aaKnown RBP12.18□□□□□ -0.46
MCF2L-213ENST00000421756 BICRALQ6AI39 1079 aa12.18□□□□□ -0.46
MCF2L-213ENST00000421756 CD200R1LQ6Q8B3 271 aa12.18□□□□□ -0.46
MCF2L-213ENST00000421756 RNF113BQ8IZP6 322 aaKnown RBP12.18□□□□□ -0.46
MCF2L-213ENST00000421756 OR5M1Q8NGP8 315 aa12.18□□□□□ -0.46
MCF2L-213ENST00000421756 DEDD2Q8WXF8 326 aa12.18□□□□□ -0.46
MCF2L-213ENST00000421756 CTHRC1Q96CG8 243 aa12.18□□□□□ -0.46
MCF2L-213ENST00000421756 PGLYRP3Q96LB9 341 aa12.18□□□□□ -0.46
MCF2L-213ENST00000421756 ING3Q9NXR8 418 aa12.18□□□□□ -0.46
MCF2L-213ENST00000421756 CEP250Q9BV73 2442 aa12.18□□□□□ -0.46
MCF2L-213ENST00000421756 A0A087WV62 115 aa12.18□□□□□ -0.46
MCF2L-213ENST00000421756 FAM47E-STBD1D6RA91 191 aa12.18□□□□□ -0.46
MCF2L-213ENST00000421756 OR6A2O95222 327 aa12.18□□□□□ -0.46
MCF2L-213ENST00000421756 UTS2O95399 124 aa12.18□□□□□ -0.46
MCF2L-213ENST00000421756 SPARCP09486 303 aa12.18□□□□□ -0.46
MCF2L-213ENST00000421756 CD38P28907 300 aa12.18□□□□□ -0.46
MCF2L-213ENST00000421756 RAB30Q15771 203 aa12.18□□□□□ -0.46
MCF2L-213ENST00000421756 ARHGAP40Q5TG30 622 aa12.18□□□□□ -0.46
MCF2L-213ENST00000421756 LIPNQ5VXI9 398 aa12.18□□□□□ -0.46
MCF2L-213ENST00000421756 ZNF550Q7Z398 422 aa12.18□□□□□ -0.46
MCF2L-213ENST00000421756 DUSP19Q8WTR2 217 aa12.18□□□□□ -0.46
MCF2L-213ENST00000421756 NSMAFQ92636 917 aa12.18□□□□□ -0.46
MCF2L-213ENST00000421756 NDUFB5O43674 189 aa12.17□□□□□ -0.46
MCF2L-213ENST00000421756 MPZL1O95297 269 aa12.17□□□□□ -0.46
MCF2L-213ENST00000421756 UBL4AP11441 157 aa12.17□□□□□ -0.46
MCF2L-213ENST00000421756 CXCR1P25024 350 aa12.17□□□□□ -0.46
MCF2L-213ENST00000421756 SNTB2Q13425 540 aaKnown RBP12.17□□□□□ -0.46
MCF2L-213ENST00000421756 TSEN15Q8WW01 171 aaKnown RBP12.17□□□□□ -0.46
MCF2L-213ENST00000421756 NPAS1Q99742 590 aa12.17□□□□□ -0.46
MCF2L-213ENST00000421756 OR2B2Q9GZK3 357 aa12.17□□□□□ -0.46
MCF2L-213ENST00000421756 TCF7L1Q9HCS4 588 aa12.17□□□□□ -0.46
MCF2L-213ENST00000421756 RXFP3Q9NSD7 469 aa12.17□□□□□ -0.46
MCF2L-213ENST00000421756 LAMP5Q9UJQ1 280 aa12.17□□□□□ -0.46
MCF2L-213ENST00000421756 CACNG2Q9Y698 323 aa12.17□□□□□ -0.46
MCF2L-213ENST00000421756 SOX1O00570 391 aaPredicted RBP12.17□□□□□ -0.46
MCF2L-213ENST00000421756 GDF9O60383 454 aa12.17□□□□□ -0.46
MCF2L-213ENST00000421756 NOS1APO75052 506 aaPredicted RBP12.17□□□□□ -0.46
MCF2L-213ENST00000421756 SLC25A12O75746 678 aa12.17□□□□□ -0.46
MCF2L-213ENST00000421756 ARRB1P49407 418 aaPredicted RBP12.17□□□□□ -0.46
MCF2L-213ENST00000421756 TMEM44Q2T9K0 475 aa12.17□□□□□ -0.46
MCF2L-213ENST00000421756 SLC25A25Q6KCM7 469 aa12.17□□□□□ -0.46
MCF2L-213ENST00000421756 AMELYQ99218 206 aa12.17□□□□□ -0.46
MCF2L-213ENST00000421756 CUTCQ9NTM9 273 aa12.17□□□□□ -0.46
MCF2L-213ENST00000421756 CTSFQ9UBX1 484 aa12.17□□□□□ -0.46
MCF2L-213ENST00000421756 SLC22A13Q9Y226 551 aa12.17□□□□□ -0.46
MCF2L-213ENST00000421756 FMO6PO60774 539 aa12.17□□□□□ -0.46
MCF2L-213ENST00000421756 DCNP07585 359 aaKnown RBP12.17□□□□□ -0.46
MCF2L-213ENST00000421756 POU2F2P09086 479 aa12.17□□□□□ -0.46
MCF2L-213ENST00000421756 GPR3P46089 330 aa12.17□□□□□ -0.46
MCF2L-213ENST00000421756 LTBQ06643 244 aa12.17□□□□□ -0.46
MCF2L-213ENST00000421756 RPL18Q07020 188 aaKnown RBP12.17□□□□□ -0.46
MCF2L-213ENST00000421756 LGALS3BPQ08380 585 aa12.17□□□□□ -0.46
MCF2L-213ENST00000421756 CDK10Q15131 360 aa12.17□□□□□ -0.46
MCF2L-213ENST00000421756 GPALPP1Q8IXQ4 340 aa12.17□□□□□ -0.46
MCF2L-213ENST00000421756 CMTM4Q8IZR5 234 aa12.17□□□□□ -0.46
MCF2L-213ENST00000421756 SMRP1Q8NCR6 262 aa12.17□□□□□ -0.46
MCF2L-213ENST00000421756 NPEPL1Q8NDH3 523 aa12.17□□□□□ -0.46
MCF2L-213ENST00000421756 LPAR4Q99677 370 aa12.17□□□□□ -0.46
MCF2L-213ENST00000421756 IRF2BPLQ9H1B7 796 aa12.17□□□□□ -0.46
MCF2L-213ENST00000421756 LIN7BQ9HAP6 207 aa12.17□□□□□ -0.46
MCF2L-213ENST00000421756 SATB2Q9UPW6 733 aa12.17□□□□□ -0.46
MCF2L-213ENST00000421756 FKBP7Q9Y680 259 aa12.17□□□□□ -0.46
MCF2L-213ENST00000421756 GMDSO60547 372 aa12.16□□□□□ -0.46
MCF2L-213ENST00000421756 FOLR1P15328 257 aa12.16□□□□□ -0.46
MCF2L-213ENST00000421756 MTNR1BP49286 362 aa12.16□□□□□ -0.46
MCF2L-213ENST00000421756 FBXW4P57775 412 aa12.16□□□□□ -0.46
MCF2L-213ENST00000421756 ELOCQ15369 112 aa12.16□□□□□ -0.46
MCF2L-213ENST00000421756 SF3A2Q15428 464 aaKnown RBP12.16□□□□□ -0.46
MCF2L-213ENST00000421756 OR7E24Q6IFN5 339 aa12.16□□□□□ -0.46
MCF2L-213ENST00000421756 NR4A3Q92570 626 aa12.16□□□□□ -0.46
MCF2L-213ENST00000421756 MED18Q9BUE0 208 aa12.16□□□□□ -0.46
MCF2L-213ENST00000421756 G6PC3Q9BUM1 346 aa12.16□□□□□ -0.46
MCF2L-213ENST00000421756 MOV10Q9HCE1 1003 aaKnown RBP12.16□□□□□ -0.46
MCF2L-213ENST00000421756 CHRNA9Q9UGM1 479 aa12.16□□□□□ -0.46
MCF2L-213ENST00000421756 KCNG2Q9UJ96 466 aa12.16□□□□□ -0.46
MCF2L-213ENST00000421756 POLHQ9Y253 713 aa12.16□□□□□ -0.46
MCF2L-213ENST00000421756 MUC22E2RYF6 1773 aaPredicted RBP12.16□□□□□ -0.46
MCF2L-213ENST00000421756 FAM221BA6H8Z2 402 aa12.16□□□□□ -0.46
MCF2L-213ENST00000421756 FAM172BPA6NC97 362 aa12.16□□□□□ -0.46
MCF2L-213ENST00000421756 UCHL1P09936 223 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms