RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 NMNAT1Q9HAN9 279 aaPredicted RBP20.48■□□□□ 0.87
SMARCB1-205ENST00000417137 ZNF229Q9UJW7 825 aa20.48■□□□□ 0.87
SMARCB1-205ENST00000417137 CACNA1CQ13936 2221 aa20.47■□□□□ 0.87
SMARCB1-205ENST00000417137 FFAR1O14842 300 aa20.47■□□□□ 0.87
SMARCB1-205ENST00000417137 OR6A2O95222 327 aa20.47■□□□□ 0.87
SMARCB1-205ENST00000417137 SMIM11AP58511 58 aa20.47■□□□□ 0.87
SMARCB1-205ENST00000417137 MS4A2Q01362 244 aa20.47■□□□□ 0.87
SMARCB1-205ENST00000417137 ZNF787Q6DD87 383 aa20.47■□□□□ 0.87
SMARCB1-205ENST00000417137 CASP12Q6UXS9 341 aa20.47■□□□□ 0.87
SMARCB1-205ENST00000417137 CREB3L2Q70SY1 520 aa20.47■□□□□ 0.87
SMARCB1-205ENST00000417137 RRM2BQ7LG56 351 aa20.47■□□□□ 0.87
SMARCB1-205ENST00000417137 AAED1Q7RTV5 226 aa20.47■□□□□ 0.87
SMARCB1-205ENST00000417137 RNF113BQ8IZP6 322 aaKnown RBP20.47■□□□□ 0.87
SMARCB1-205ENST00000417137 MARVELD3Q96A59 401 aa20.47■□□□□ 0.87
SMARCB1-205ENST00000417137 CCDC124Q96CT7 223 aaKnown RBP20.47■□□□□ 0.87
SMARCB1-205ENST00000417137 SGTBQ96EQ0 304 aa20.47■□□□□ 0.87
SMARCB1-205ENST00000417137 MEPEQ9NQ76 525 aaPredicted RBP20.47■□□□□ 0.87
SMARCB1-205ENST00000417137 KCNN3Q9UGI6 736 aa20.47■□□□□ 0.87
SMARCB1-205ENST00000417137 MYO9AB2RTY4 2548 aa20.46■□□□□ 0.87
SMARCB1-205ENST00000417137 hCG_2039718K7EN88 272 aa20.46■□□□□ 0.87
SMARCB1-205ENST00000417137 FABP3P05413 133 aa20.46■□□□□ 0.87
SMARCB1-205ENST00000417137 H1F0P07305 194 aaKnown RBP20.46■□□□□ 0.87
SMARCB1-205ENST00000417137 UMPSP11172 480 aa20.46■□□□□ 0.87
SMARCB1-205ENST00000417137 ATP6V1B2P21281 511 aa20.46■□□□□ 0.87
SMARCB1-205ENST00000417137 UGT2B10P36537 528 aa20.46■□□□□ 0.87
SMARCB1-205ENST00000417137 UGT2B15P54855 530 aa20.46■□□□□ 0.87
SMARCB1-205ENST00000417137 VLDLRP98155 873 aa20.46■□□□□ 0.87
SMARCB1-205ENST00000417137 P2RY6Q15077 328 aa20.46■□□□□ 0.87
SMARCB1-205ENST00000417137 Q6ZT83 130 aa20.46■□□□□ 0.87
SMARCB1-205ENST00000417137 CDK20Q8IZL9 346 aa20.46■□□□□ 0.87
SMARCB1-205ENST00000417137 UBE2J2Q8N2K1 259 aa20.46■□□□□ 0.87
SMARCB1-205ENST00000417137 KDM8Q8N371 416 aa20.46■□□□□ 0.87
SMARCB1-205ENST00000417137 PIK3C3Q8NEB9 887 aa20.46■□□□□ 0.87
SMARCB1-205ENST00000417137 FAM222BQ8WU58 562 aa20.46■□□□□ 0.87
SMARCB1-205ENST00000417137 ACOT11Q8WXI4 607 aaPredicted RBP20.46■□□□□ 0.87
SMARCB1-205ENST00000417137 PIP5K1AQ99755 562 aa20.46■□□□□ 0.87
SMARCB1-205ENST00000417137 IL1RAPQ9NPH3 570 aa20.46■□□□□ 0.87
SMARCB1-205ENST00000417137 SEC14L4Q9UDX3 406 aa20.46■□□□□ 0.87
SMARCB1-205ENST00000417137 GPR52Q9Y2T5 361 aa20.46■□□□□ 0.87
SMARCB1-205ENST00000417137 A0A1W2PRQ8 180 aa20.45■□□□□ 0.86
SMARCB1-205ENST00000417137 ENO4A6NNW6 628 aa20.45■□□□□ 0.86
SMARCB1-205ENST00000417137 LRRN3E7EW58 273 aa20.45■□□□□ 0.86
SMARCB1-205ENST00000417137 MS4A18H0YCH9 400 aa20.45■□□□□ 0.86
SMARCB1-205ENST00000417137 PLPP3O14495 311 aa20.45■□□□□ 0.86
SMARCB1-205ENST00000417137 GSC2O15499 205 aa20.45■□□□□ 0.86
SMARCB1-205ENST00000417137 PRSS23O95084 383 aa20.45■□□□□ 0.86
SMARCB1-205ENST00000417137 SEMG1P04279 462 aa20.45■□□□□ 0.86
SMARCB1-205ENST00000417137 PUDPQ08623 228 aa20.45■□□□□ 0.86
SMARCB1-205ENST00000417137 DGCR6Q14129 220 aa20.45■□□□□ 0.86
SMARCB1-205ENST00000417137 MS4A18Q3C1V0 323 aa20.45■□□□□ 0.86
SMARCB1-205ENST00000417137 FBXW9Q5XUX1 488 aa20.45■□□□□ 0.86
SMARCB1-205ENST00000417137 PGM2L1Q6PCE3 622 aa20.45■□□□□ 0.86
SMARCB1-205ENST00000417137 ZNF730Q6ZMV8 503 aa20.45■□□□□ 0.86
SMARCB1-205ENST00000417137 TSEN54Q7Z6J9 526 aaKnown RBP20.45■□□□□ 0.86
SMARCB1-205ENST00000417137 UEVLDQ8IX04 471 aa20.45■□□□□ 0.86
SMARCB1-205ENST00000417137 ZIC4Q8N9L1 334 aa20.45■□□□□ 0.86
SMARCB1-205ENST00000417137 PFN4Q8NHR9 129 aa20.45■□□□□ 0.86
SMARCB1-205ENST00000417137 ZNF385AQ96PM9 386 aaKnown RBP20.45■□□□□ 0.86
SMARCB1-205ENST00000417137 ZNF347Q96SE7 839 aa20.45■□□□□ 0.86
SMARCB1-205ENST00000417137 MAN2C1Q9NTJ4 1040 aa20.45■□□□□ 0.86
SMARCB1-205ENST00000417137 NOX1Q9Y5S8 564 aa20.45■□□□□ 0.86
SMARCB1-205ENST00000417137 NBPF19A0A087WUL8 3843 aa20.45■□□□□ 0.86
SMARCB1-205ENST00000417137 HCFC1P51610 2035 aa20.44■□□□□ 0.86
SMARCB1-205ENST00000417137 OR6C65A6NJZ3 312 aa20.44■□□□□ 0.86
SMARCB1-205ENST00000417137 AKAP8O43823 692 aaKnown RBP20.44■□□□□ 0.86
SMARCB1-205ENST00000417137 OR7A10O76100 309 aa20.44■□□□□ 0.86
SMARCB1-205ENST00000417137 ADAP00813 363 aa20.44■□□□□ 0.86
SMARCB1-205ENST00000417137 ADORA3P0DMS8 318 aa20.44■□□□□ 0.86
SMARCB1-205ENST00000417137 PPP3CBP16298 524 aa20.44■□□□□ 0.86
SMARCB1-205ENST00000417137 FUT1P19526 365 aa20.44■□□□□ 0.86
SMARCB1-205ENST00000417137 AHCYP23526 432 aa20.44■□□□□ 0.86
SMARCB1-205ENST00000417137 NTF4P34130 210 aa20.44■□□□□ 0.86
SMARCB1-205ENST00000417137 CBX1P83916 185 aa20.44■□□□□ 0.86
SMARCB1-205ENST00000417137 SNTB1Q13884 538 aaKnown RBP20.44■□□□□ 0.86
SMARCB1-205ENST00000417137 FAM98BQ52LJ0 330 aaKnown RBP20.44■□□□□ 0.86
SMARCB1-205ENST00000417137 STAC2Q6ZMT1 411 aa20.44■□□□□ 0.86
SMARCB1-205ENST00000417137 PXKQ7Z7A4 578 aa20.44■□□□□ 0.86
SMARCB1-205ENST00000417137 EPHX4Q8IUS5 362 aa20.44■□□□□ 0.86
SMARCB1-205ENST00000417137 ZDHHC21Q8IVQ6 265 aa20.44■□□□□ 0.86
SMARCB1-205ENST00000417137 GABRG1Q8N1C3 465 aa20.44■□□□□ 0.86
SMARCB1-205ENST00000417137 DACH2Q96NX9 599 aa20.44■□□□□ 0.86
SMARCB1-205ENST00000417137 SEPHS2Q99611 448 aa20.44■□□□□ 0.86
SMARCB1-205ENST00000417137 USB1Q9BQ65 265 aaKnown RBP20.44■□□□□ 0.86
SMARCB1-205ENST00000417137 OR10A4Q9H209 315 aa20.44■□□□□ 0.86
SMARCB1-205ENST00000417137 MMADHCQ9H3L0 296 aaPredicted RBP20.44■□□□□ 0.86
SMARCB1-205ENST00000417137 MAGIXQ9H6Y5 334 aa20.44■□□□□ 0.86
SMARCB1-205ENST00000417137 UPB1Q9UBR1 384 aa20.44■□□□□ 0.86
SMARCB1-205ENST00000417137 PRSS50Q9UI38 385 aa20.44■□□□□ 0.86
SMARCB1-205ENST00000417137 ACOT8O14734 319 aa20.43■□□□□ 0.86
SMARCB1-205ENST00000417137 ASAH2BP0C7U1 165 aa20.43■□□□□ 0.86
SMARCB1-205ENST00000417137 IFI30P13284 250 aa20.43■□□□□ 0.86
SMARCB1-205ENST00000417137 PSMB1P20618 241 aaKnown RBP20.43■□□□□ 0.86
SMARCB1-205ENST00000417137 CLDN17P56750 224 aa20.43■□□□□ 0.86
SMARCB1-205ENST00000417137 CHRNB3Q05901 458 aa20.43■□□□□ 0.86
SMARCB1-205ENST00000417137 ZP4Q12836 540 aa20.43■□□□□ 0.86
SMARCB1-205ENST00000417137 ITGADQ13349 1161 aa20.43■□□□□ 0.86
SMARCB1-205ENST00000417137 CCDC121Q6ZUS5 278 aa20.43■□□□□ 0.86
SMARCB1-205ENST00000417137 MBOAT2Q6ZWT7 520 aa20.43■□□□□ 0.86
SMARCB1-205ENST00000417137 PIWIL3Q7Z3Z3 882 aaKnown RBP20.43■□□□□ 0.86
SMARCB1-205ENST00000417137 NANOGNBQ7Z5D8 188 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms