RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 M0R1B8 84 aa13.71□□□□□ -0.21
ITGB1-204ENST00000417122 FXYD1O00168 92 aa13.71□□□□□ -0.21
ITGB1-204ENST00000417122 FMO6PO60774 539 aa13.71□□□□□ -0.21
ITGB1-204ENST00000417122 KRT34O76011 436 aa13.71□□□□□ -0.21
ITGB1-204ENST00000417122 DANCRP0C864 163 aa13.71□□□□□ -0.21
ITGB1-204ENST00000417122 PAX1P15863 534 aa13.71□□□□□ -0.21
ITGB1-204ENST00000417122 CDH2P19022 906 aaPredicted RBP13.71□□□□□ -0.21
ITGB1-204ENST00000417122 PTAFRP25105 342 aa13.71□□□□□ -0.21
ITGB1-204ENST00000417122 MDH1P40925 334 aaKnown RBP13.71□□□□□ -0.21
ITGB1-204ENST00000417122 CLDN17P56750 224 aa13.71□□□□□ -0.21
ITGB1-204ENST00000417122 RPS4XP62701 263 aaKnown RBP13.71□□□□□ -0.21
ITGB1-204ENST00000417122 MFSD13AQ14CX5 517 aa13.71□□□□□ -0.21
ITGB1-204ENST00000417122 SWT1Q5T5J6 900 aaKnown RBP13.71□□□□□ -0.21
ITGB1-204ENST00000417122 ZNF613Q6PF04 617 aa13.71□□□□□ -0.21
ITGB1-204ENST00000417122 H1FNTQ75WM6 255 aaPredicted RBP13.71□□□□□ -0.21
ITGB1-204ENST00000417122 SNX32Q86XE0 403 aa13.71□□□□□ -0.21
ITGB1-204ENST00000417122 PCYOX1LQ8NBM8 494 aa13.71□□□□□ -0.21
ITGB1-204ENST00000417122 OR6T1Q8NGN1 323 aa13.71□□□□□ -0.21
ITGB1-204ENST00000417122 OR6S1Q8NH40 331 aa13.71□□□□□ -0.21
ITGB1-204ENST00000417122 VANGL1Q8TAA9 524 aaPredicted RBP13.71□□□□□ -0.21
ITGB1-204ENST00000417122 RASSF5Q8WWW0 418 aa13.71□□□□□ -0.21
ITGB1-204ENST00000417122 TAMM41Q96BW9 452 aa13.71□□□□□ -0.21
ITGB1-204ENST00000417122 RADILQ96JH8 1075 aa13.71□□□□□ -0.21
ITGB1-204ENST00000417122 Q96MF0 132 aa13.71□□□□□ -0.21
ITGB1-204ENST00000417122 C1QTNF6Q9BXI9 259 aa13.71□□□□□ -0.21
ITGB1-204ENST00000417122 ZNF701Q9NV72 531 aaPredicted RBP13.71□□□□□ -0.21
ITGB1-204ENST00000417122 CISD1Q9NZ45 108 aaKnown RBP13.71□□□□□ -0.21
ITGB1-204ENST00000417122 B3GAT1Q9P2W7 334 aa13.71□□□□□ -0.21
ITGB1-204ENST00000417122 MGAT4BQ9UQ53 548 aa13.71□□□□□ -0.21
ITGB1-204ENST00000417122 ZNF587BE7ETH6 402 aa13.7□□□□□ -0.22
ITGB1-204ENST00000417122 BGLAPP02818 100 aa13.7□□□□□ -0.22
ITGB1-204ENST00000417122 SOD3P08294 240 aa13.7□□□□□ -0.22
ITGB1-204ENST00000417122 CD247P20963 164 aa13.7□□□□□ -0.22
ITGB1-204ENST00000417122 PTNP21246 168 aa13.7□□□□□ -0.22
ITGB1-204ENST00000417122 CD40P25942 277 aa13.7□□□□□ -0.22
ITGB1-204ENST00000417122 CDH11P55287 796 aa13.7□□□□□ -0.22
ITGB1-204ENST00000417122 SLC25A3Q00325 362 aa13.7□□□□□ -0.22
ITGB1-204ENST00000417122 IL1RL1Q01638 556 aa13.7□□□□□ -0.22
ITGB1-204ENST00000417122 LGALS3BPQ08380 585 aa13.7□□□□□ -0.22
ITGB1-204ENST00000417122 C1DQ13901 141 aaKnown RBP13.7□□□□□ -0.22
ITGB1-204ENST00000417122 NPTX1Q15818 432 aa13.7□□□□□ -0.22
ITGB1-204ENST00000417122 ENTPD8Q5MY95 495 aa13.7□□□□□ -0.22
ITGB1-204ENST00000417122 C1QTNF12Q5T7M4 302 aa13.7□□□□□ -0.22
ITGB1-204ENST00000417122 CCDC80Q76M96 950 aa13.7□□□□□ -0.22
ITGB1-204ENST00000417122 CALHM3Q86XJ0 350 aa13.7□□□□□ -0.22
ITGB1-204ENST00000417122 RBM45Q8IUH3 476 aaKnown RBP13.7□□□□□ -0.22
ITGB1-204ENST00000417122 ADPRHL1Q8NDY3 354 aa13.7□□□□□ -0.22
ITGB1-204ENST00000417122 OR4D11Q8NGI4 311 aa13.7□□□□□ -0.22
ITGB1-204ENST00000417122 C10orf82Q8WW14 230 aa13.7□□□□□ -0.22
ITGB1-204ENST00000417122 BOD1Q96IK1 185 aa13.7□□□□□ -0.22
ITGB1-204ENST00000417122 C18orf12Q96KH6 178 aa13.7□□□□□ -0.22
ITGB1-204ENST00000417122 ALKBH3Q96Q83 286 aaPredicted RBP13.7□□□□□ -0.22
ITGB1-204ENST00000417122 TMEM43Q9BTV4 400 aa13.7□□□□□ -0.22
ITGB1-204ENST00000417122 LINC00470Q9BZP3 86 aa13.7□□□□□ -0.22
ITGB1-204ENST00000417122 GSX1Q9H4S2 264 aaPredicted RBP13.7□□□□□ -0.22
ITGB1-204ENST00000417122 GID8Q9NWU2 228 aa13.7□□□□□ -0.22
ITGB1-204ENST00000417122 CORINQ9Y5Q5 1042 aa13.7□□□□□ -0.22
ITGB1-204ENST00000417122 MAGED1Q9Y5V3 778 aaPredicted RBP13.7□□□□□ -0.22
ITGB1-204ENST00000417122 CAPN7Q9Y6W3 813 aa13.7□□□□□ -0.22
ITGB1-204ENST00000417122 LOC102725191A0A1B0GVB3 256 aa13.69□□□□□ -0.22
ITGB1-204ENST00000417122 CPSF4LA6NMK7 179 aaKnown RBP13.69□□□□□ -0.22
ITGB1-204ENST00000417122 MS4A18H0YCH9 400 aa13.69□□□□□ -0.22
ITGB1-204ENST00000417122 CHP2O43745 196 aa13.69□□□□□ -0.22
ITGB1-204ENST00000417122 UPK3AO75631 287 aa13.69□□□□□ -0.22
ITGB1-204ENST00000417122 ZNF432O94892 652 aa13.69□□□□□ -0.22
ITGB1-204ENST00000417122 WNT11O96014 354 aa13.69□□□□□ -0.22
ITGB1-204ENST00000417122 NQO1P15559 274 aaKnown RBP13.69□□□□□ -0.22
ITGB1-204ENST00000417122 ATP5J2P56134 94 aa13.69□□□□□ -0.22
ITGB1-204ENST00000417122 PRPS1P60891 318 aa13.69□□□□□ -0.22
ITGB1-204ENST00000417122 LTBQ06643 244 aa13.69□□□□□ -0.22
ITGB1-204ENST00000417122 SPOCK1Q08629 439 aa13.69□□□□□ -0.22
ITGB1-204ENST00000417122 PGGHGQ32M88 737 aa13.69□□□□□ -0.22
ITGB1-204ENST00000417122 MS4A18Q3C1V0 323 aa13.69□□□□□ -0.22
ITGB1-204ENST00000417122 SLC22A25Q6T423 547 aa13.69□□□□□ -0.22
ITGB1-204ENST00000417122 KLHL24Q6TFL4 600 aa13.69□□□□□ -0.22
ITGB1-204ENST00000417122 LINC00114Q6XXX2 140 aa13.69□□□□□ -0.22
ITGB1-204ENST00000417122 LINGO2Q7L985 606 aa13.69□□□□□ -0.22
ITGB1-204ENST00000417122 SCAIQ8N9R8 606 aa13.69□□□□□ -0.22
ITGB1-204ENST00000417122 ADAMTS16Q8TE57 1224 aa13.69□□□□□ -0.22
ITGB1-204ENST00000417122 SLC41A3Q96GZ6 507 aa13.69□□□□□ -0.22
ITGB1-204ENST00000417122 ZNF317Q96PQ6 595 aaPredicted RBP13.69□□□□□ -0.22
ITGB1-204ENST00000417122 ASPNQ9BXN1 380 aa13.69□□□□□ -0.22
ITGB1-204ENST00000417122 ARMCX1Q9P291 453 aa13.69□□□□□ -0.22
ITGB1-204ENST00000417122 RCE1Q9Y256 329 aa13.69□□□□□ -0.22
ITGB1-204ENST00000417122 ROS1P08922 2347 aa13.68□□□□□ -0.22
ITGB1-204ENST00000417122 ARID1AO14497 2285 aa13.68□□□□□ -0.22
ITGB1-204ENST00000417122 OVOL3O00110 214 aa13.68□□□□□ -0.22
ITGB1-204ENST00000417122 SLC22A2O15244 555 aa13.68□□□□□ -0.22
ITGB1-204ENST00000417122 ATP8B1O43520 1251 aa13.68□□□□□ -0.22
ITGB1-204ENST00000417122 AKAP8O43823 692 aaKnown RBP13.68□□□□□ -0.22
ITGB1-204ENST00000417122 SLC43A1O75387 559 aa13.68□□□□□ -0.22
ITGB1-204ENST00000417122 INHBBP09529 407 aa13.68□□□□□ -0.22
ITGB1-204ENST00000417122 CRYBA2P53672 197 aa13.68□□□□□ -0.22
ITGB1-204ENST00000417122 PMS2P3Q13401 168 aa13.68□□□□□ -0.22
ITGB1-204ENST00000417122 VEZF1Q14119 521 aa13.68□□□□□ -0.22
ITGB1-204ENST00000417122 HIKESHIQ53FT3 197 aa13.68□□□□□ -0.22
ITGB1-204ENST00000417122 HMBOX1Q6NT76 420 aa13.68□□□□□ -0.22
ITGB1-204ENST00000417122 ERICH5Q6P6B1 374 aa13.68□□□□□ -0.22
ITGB1-204ENST00000417122 BIVMQ86UB2 503 aa13.68□□□□□ -0.22
ITGB1-204ENST00000417122 UEVLDQ8IX04 471 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms