RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 SPRYD4Q8WW59 207 aaPredicted RBP2.52□□□□□ -2.01
HMGB1P11-201ENST00000413899 ZNF799Q96GE5 643 aa2.52□□□□□ -2.01
HMGB1P11-201ENST00000413899 C4orf36Q96KX1 117 aa2.52□□□□□ -2.01
HMGB1P11-201ENST00000413899 ARHGDIGQ99819 225 aa2.52□□□□□ -2.01
HMGB1P11-201ENST00000413899 BPIFA3Q9BQP9 254 aa2.52□□□□□ -2.01
HMGB1P11-201ENST00000413899 HES7Q9BYE0 225 aa2.52□□□□□ -2.01
HMGB1P11-201ENST00000413899 NAT10Q9H0A0 1025 aaKnown RBP2.52□□□□□ -2.01
HMGB1P11-201ENST00000413899 SMYD3Q9H7B4 428 aa2.52□□□□□ -2.01
HMGB1P11-201ENST00000413899 MEAF6Q9HAF1 191 aa2.52□□□□□ -2.01
HMGB1P11-201ENST00000413899 APMAPQ9HDC9 416 aa2.52□□□□□ -2.01
HMGB1P11-201ENST00000413899 NUDT15Q9NV35 164 aa2.52□□□□□ -2.01
HMGB1P11-201ENST00000413899 WARS2Q9UGM6 360 aaKnown RBP2.52□□□□□ -2.01
HMGB1P11-201ENST00000413899 CFAP45Q9UL16 551 aa2.52□□□□□ -2.01
HMGB1P11-201ENST00000413899 CROCCQ5TZA2 2017 aa2.52□□□□□ -2.01
HMGB1P11-201ENST00000413899 TSC2P49815 1807 aa2.52□□□□□ -2.01
HMGB1P11-201ENST00000413899 USP27XA6NNY8 438 aa2.51□□□□□ -2.01
HMGB1P11-201ENST00000413899 TRIM49D1C9J1S8 452 aa2.51□□□□□ -2.01
HMGB1P11-201ENST00000413899 NPIPA7E9PJI5 369 aa2.51□□□□□ -2.01
HMGB1P11-201ENST00000413899 PPIAL4DF5H284 164 aa2.51□□□□□ -2.01
HMGB1P11-201ENST00000413899 CPLX1O14810 134 aa2.51□□□□□ -2.01
HMGB1P11-201ENST00000413899 SLC37A4O43826 429 aa2.51□□□□□ -2.01
HMGB1P11-201ENST00000413899 KLRC4O43908 158 aa2.51□□□□□ -2.01
HMGB1P11-201ENST00000413899 HCN1O60741 890 aa2.51□□□□□ -2.01
HMGB1P11-201ENST00000413899 SLITRK3O94933 977 aa2.51□□□□□ -2.01
HMGB1P11-201ENST00000413899 GOLGA8HP0CJ92 632 aa2.51□□□□□ -2.01
HMGB1P11-201ENST00000413899 NPIPA8P0DM63 369 aa2.51□□□□□ -2.01
HMGB1P11-201ENST00000413899 CALM1P0DP23 149 aa2.51□□□□□ -2.01
HMGB1P11-201ENST00000413899 CALM2P0DP24 149 aa2.51□□□□□ -2.01
HMGB1P11-201ENST00000413899 CALM3P0DP25 149 aa2.51□□□□□ -2.01
HMGB1P11-201ENST00000413899 MDKP21741 143 aaPredicted RBP2.51□□□□□ -2.01
HMGB1P11-201ENST00000413899 CASP1P29466 404 aa2.51□□□□□ -2.01
HMGB1P11-201ENST00000413899 ACAA2P42765 397 aaKnown RBP2.51□□□□□ -2.01
HMGB1P11-201ENST00000413899 STK38Q15208 465 aa2.51□□□□□ -2.01
HMGB1P11-201ENST00000413899 ATF7IP2Q5U623 682 aa2.51□□□□□ -2.01
HMGB1P11-201ENST00000413899 NCR3LG1Q68D85 454 aa2.51□□□□□ -2.01
HMGB1P11-201ENST00000413899 CCDC73Q6ZRK6 1079 aa2.51□□□□□ -2.01
HMGB1P11-201ENST00000413899 Q6ZVH6 145 aa2.51□□□□□ -2.01
HMGB1P11-201ENST00000413899 ARCQ7LC44 396 aa2.51□□□□□ -2.01
HMGB1P11-201ENST00000413899 FAM220AQ7Z4H9 259 aa2.51□□□□□ -2.01
HMGB1P11-201ENST00000413899 GRAMD2AQ8IUY3 354 aa2.51□□□□□ -2.01
HMGB1P11-201ENST00000413899 BLIDQ8IZY5 108 aa2.51□□□□□ -2.01
HMGB1P11-201ENST00000413899 RNF175Q8N4F7 328 aa2.51□□□□□ -2.01
HMGB1P11-201ENST00000413899 DHRSXQ8N5I4 330 aa2.51□□□□□ -2.01
HMGB1P11-201ENST00000413899 KIR3DL3Q8N743 410 aa2.51□□□□□ -2.01
HMGB1P11-201ENST00000413899 DENND6BQ8NEG7 585 aa2.51□□□□□ -2.01
HMGB1P11-201ENST00000413899 PAQR8Q8TEZ7 354 aa2.51□□□□□ -2.01
HMGB1P11-201ENST00000413899 DNAJA4Q8WW22 397 aaPredicted RBP2.51□□□□□ -2.01
HMGB1P11-201ENST00000413899 FAM3CQ92520 227 aa2.51□□□□□ -2.01
HMGB1P11-201ENST00000413899 C12orf66Q96MD2 445 aa2.51□□□□□ -2.01
HMGB1P11-201ENST00000413899 MBOAT7Q96N66 472 aa2.51□□□□□ -2.01
HMGB1P11-201ENST00000413899 EBF4Q9BQW3 602 aa2.51□□□□□ -2.01
HMGB1P11-201ENST00000413899 DPH5Q9H2P9 285 aa2.51□□□□□ -2.01
HMGB1P11-201ENST00000413899 GNG12Q9UBI6 72 aa2.51□□□□□ -2.01
HMGB1P11-201ENST00000413899 NPIPA1Q9UND3 350 aa2.51□□□□□ -2.01
HMGB1P11-201ENST00000413899 RASD1Q9Y272 281 aa2.51□□□□□ -2.01
HMGB1P11-201ENST00000413899 ALG6Q9Y672 507 aa2.51□□□□□ -2.01
HMGB1P11-201ENST00000413899 CDH10Q9Y6N8 788 aa2.51□□□□□ -2.01
HMGB1P11-201ENST00000413899 ATRXP46100 2492 aa2.5□□□□□ -2.01
HMGB1P11-201ENST00000413899 ERICH2A1L162 156 aa2.5□□□□□ -2.01
HMGB1P11-201ENST00000413899 PSMB11A5LHX3 300 aa2.5□□□□□ -2.01
HMGB1P11-201ENST00000413899 K7EPI3 171 aa2.5□□□□□ -2.01
HMGB1P11-201ENST00000413899 ZNF264O43296 627 aa2.5□□□□□ -2.01
HMGB1P11-201ENST00000413899 OR1F1O43749 312 aa2.5□□□□□ -2.01
HMGB1P11-201ENST00000413899 PRKYO43930 277 aa2.5□□□□□ -2.01
HMGB1P11-201ENST00000413899 NEBLO76041 1014 aa2.5□□□□□ -2.01
HMGB1P11-201ENST00000413899 TDP2O95551 362 aa2.5□□□□□ -2.01
HMGB1P11-201ENST00000413899 GNA14O95837 355 aa2.5□□□□□ -2.01
HMGB1P11-201ENST00000413899 TOP1P11387 765 aaKnown RBP2.5□□□□□ -2.01
HMGB1P11-201ENST00000413899 CALB2P22676 271 aa2.5□□□□□ -2.01
HMGB1P11-201ENST00000413899 CCNE1P24864 410 aa2.5□□□□□ -2.01
HMGB1P11-201ENST00000413899 HPDP32754 393 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P11-201ENST00000413899 UGT1A5P35504 534 aa2.5□□□□□ -2.01
HMGB1P11-201ENST00000413899 SYKP43405 635 aa2.5□□□□□ -2.01
HMGB1P11-201ENST00000413899 CAV2P51636 162 aa2.5□□□□□ -2.01
HMGB1P11-201ENST00000413899 PRKXP51817 358 aa2.5□□□□□ -2.01
HMGB1P11-201ENST00000413899 ZNF133P52736 654 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P11-201ENST00000413899 NUP107P57740 925 aa2.5□□□□□ -2.01
HMGB1P11-201ENST00000413899 DAZ2Q13117 558 aaKnown RBP2.5□□□□□ -2.01
HMGB1P11-201ENST00000413899 UBE2SQ16763 222 aa2.5□□□□□ -2.01
HMGB1P11-201ENST00000413899 TATDN3Q17R31 274 aa2.5□□□□□ -2.01
HMGB1P11-201ENST00000413899 TPRA1Q86W33 373 aa2.5□□□□□ -2.01
HMGB1P11-201ENST00000413899 VRK2Q86Y07 508 aa2.5□□□□□ -2.01
HMGB1P11-201ENST00000413899 NRMQ8IXM6 262 aa2.5□□□□□ -2.01
HMGB1P11-201ENST00000413899 LRRC43Q8N309 656 aa2.5□□□□□ -2.01
HMGB1P11-201ENST00000413899 OR51G2Q8NGK0 314 aa2.5□□□□□ -2.01
HMGB1P11-201ENST00000413899 OR52I1Q8NGK6 324 aa2.5□□□□□ -2.01
HMGB1P11-201ENST00000413899 PIBF1Q8WXW3 757 aa2.5□□□□□ -2.01
HMGB1P11-201ENST00000413899 MRPS31Q92665 395 aaKnown RBP2.5□□□□□ -2.01
HMGB1P11-201ENST00000413899 OSTF1Q92882 214 aa2.5□□□□□ -2.01
HMGB1P11-201ENST00000413899 TMEM101Q96IK0 257 aa2.5□□□□□ -2.01
HMGB1P11-201ENST00000413899 MS4A14Q96JA4 679 aa2.5□□□□□ -2.01
HMGB1P11-201ENST00000413899 LINC00167Q96N53 147 aa2.5□□□□□ -2.01
HMGB1P11-201ENST00000413899 MTMR9Q96QG7 549 aa2.5□□□□□ -2.01
HMGB1P11-201ENST00000413899 OMDQ99983 421 aa2.5□□□□□ -2.01
HMGB1P11-201ENST00000413899 SLC35A5Q9BS91 424 aa2.5□□□□□ -2.01
HMGB1P11-201ENST00000413899 MAGT1Q9H0U3 335 aa2.5□□□□□ -2.01
HMGB1P11-201ENST00000413899 NANOGQ9H9S0 305 aa2.5□□□□□ -2.01
HMGB1P11-201ENST00000413899 DAZ3Q9NR90 486 aaKnown RBP2.5□□□□□ -2.01
HMGB1P11-201ENST00000413899 TBK1Q9UHD2 729 aa2.5□□□□□ -2.01
HMGB1P11-201ENST00000413899 ERVW-1Q9UQF0 538 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms