RNA–Protein interactions for RNA: ENST00000412328.5

HSPG2-204, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-204ENST00000412328 KDM8Q8N371 416 aa15.27■□□□□ 0.04
HSPG2-204ENST00000412328 WDR31Q8NA23 367 aa15.27■□□□□ 0.04
HSPG2-204ENST00000412328 VANGL1Q8TAA9 524 aaPredicted RBP15.27■□□□□ 0.04
HSPG2-204ENST00000412328 ADAMTS16Q8TE57 1224 aa15.27■□□□□ 0.04
HSPG2-204ENST00000412328 SLC25A36Q96CQ1 311 aa15.27■□□□□ 0.04
HSPG2-204ENST00000412328 ALKBH3Q96Q83 286 aaPredicted RBP15.27■□□□□ 0.04
HSPG2-204ENST00000412328 TMUB1Q9BVT8 246 aa15.27■□□□□ 0.04
HSPG2-204ENST00000412328 TMEM27Q9HBJ8 222 aa15.27■□□□□ 0.04
HSPG2-204ENST00000412328 DLL4Q9NR61 685 aa15.27■□□□□ 0.04
HSPG2-204ENST00000412328 PARPBPQ9NWS1 579 aa15.27■□□□□ 0.04
HSPG2-204ENST00000412328 RCE1Q9Y256 329 aa15.27■□□□□ 0.04
HSPG2-204ENST00000412328 CHD3Q12873 2000 aaKnown RBP15.27■□□□□ 0.03
HSPG2-204ENST00000412328 ARFGEF3Q5TH69 2177 aa15.26■□□□□ 0.03
HSPG2-204ENST00000412328 CR1P17927 2039 aa15.26■□□□□ 0.03
HSPG2-204ENST00000412328 LOC102725191A0A1B0GVB3 256 aa15.26■□□□□ 0.03
HSPG2-204ENST00000412328 HS3ST1O14792 307 aa15.26■□□□□ 0.03
HSPG2-204ENST00000412328 AIM2O14862 343 aa15.26■□□□□ 0.03
HSPG2-204ENST00000412328 SNX3O60493 162 aa15.26■□□□□ 0.03
HSPG2-204ENST00000412328 TNFRSF1BP20333 461 aa15.26■□□□□ 0.03
HSPG2-204ENST00000412328 HOXC12P31275 282 aa15.26■□□□□ 0.03
HSPG2-204ENST00000412328 ADAM8P78325 824 aa15.26■□□□□ 0.03
HSPG2-204ENST00000412328 STK11Q15831 433 aa15.26■□□□□ 0.03
HSPG2-204ENST00000412328 HACD2Q6Y1H2 254 aa15.26■□□□□ 0.03
HSPG2-204ENST00000412328 TGIF2LYQ8IUE0 185 aa15.26■□□□□ 0.03
HSPG2-204ENST00000412328 TMEM123Q8N131 208 aa15.26■□□□□ 0.03
HSPG2-204ENST00000412328 KBTBD8Q8NFY9 601 aa15.26■□□□□ 0.03
HSPG2-204ENST00000412328 RASSF5Q8WWW0 418 aa15.26■□□□□ 0.03
HSPG2-204ENST00000412328 NEUROG1Q92886 237 aa15.26■□□□□ 0.03
HSPG2-204ENST00000412328 ELAC2Q9BQ52 826 aaKnown RBP15.26■□□□□ 0.03
HSPG2-204ENST00000412328 ECSITQ9BQ95 431 aa15.26■□□□□ 0.03
HSPG2-204ENST00000412328 GID8Q9NWU2 228 aa15.26■□□□□ 0.03
HSPG2-204ENST00000412328 ABCD2Q9UBJ2 740 aa15.26■□□□□ 0.03
HSPG2-204ENST00000412328 SLC13A4Q9UKG4 626 aa15.26■□□□□ 0.03
HSPG2-204ENST00000412328 EDARQ9UNE0 448 aa15.26■□□□□ 0.03
HSPG2-204ENST00000412328 B3GALT5Q9Y2C3 310 aa15.26■□□□□ 0.03
HSPG2-204ENST00000412328 RNF115Q9Y4L5 304 aa15.26■□□□□ 0.03
HSPG2-204ENST00000412328 SHISA9B4DS77 424 aa15.25■□□□□ 0.03
HSPG2-204ENST00000412328 MS4A18H0YCH9 400 aa15.25■□□□□ 0.03
HSPG2-204ENST00000412328 CCDC22O60826 627 aa15.25■□□□□ 0.03
HSPG2-204ENST00000412328 UPK3AO75631 287 aa15.25■□□□□ 0.03
HSPG2-204ENST00000412328 HLA-DOBP13765 273 aa15.25■□□□□ 0.03
HSPG2-204ENST00000412328 MPGP29372 298 aa15.25■□□□□ 0.03
HSPG2-204ENST00000412328 GYS2P54840 703 aa15.25■□□□□ 0.03
HSPG2-204ENST00000412328 SPOCK1Q08629 439 aa15.25■□□□□ 0.03
HSPG2-204ENST00000412328 MS4A18Q3C1V0 323 aa15.25■□□□□ 0.03
HSPG2-204ENST00000412328 TMEM225Q6GV28 225 aa15.25■□□□□ 0.03
HSPG2-204ENST00000412328 MICU2Q8IYU8 434 aa15.25■□□□□ 0.03
HSPG2-204ENST00000412328 C17orf78Q8N4C9 275 aa15.25■□□□□ 0.03
HSPG2-204ENST00000412328 ZNF611Q8N823 705 aa15.25■□□□□ 0.03
HSPG2-204ENST00000412328 SCAIQ8N9R8 606 aa15.25■□□□□ 0.03
HSPG2-204ENST00000412328 POMGNT2Q8NAT1 580 aa15.25■□□□□ 0.03
HSPG2-204ENST00000412328 WFDC11Q8NEX6 87 aa15.25■□□□□ 0.03
HSPG2-204ENST00000412328 OR2T12Q8NG77 320 aa15.25■□□□□ 0.03
HSPG2-204ENST00000412328 LINC00470Q9BZP3 86 aa15.25■□□□□ 0.03
HSPG2-204ENST00000412328 SLC17A5Q9NRA2 495 aa15.25■□□□□ 0.03
HSPG2-204ENST00000412328 SLC7A7Q9UM01 511 aa15.25■□□□□ 0.03
HSPG2-204ENST00000412328 ZANQ9Y493 2812 aa15.24■□□□□ 0.03
HSPG2-204ENST00000412328 A0A1W2PR80 420 aa15.24■□□□□ 0.03
HSPG2-204ENST00000412328 TRAPPC13A5PLN9 417 aa15.24■□□□□ 0.03
HSPG2-204ENST00000412328 DANCRP0C864 163 aa15.24■□□□□ 0.03
HSPG2-204ENST00000412328 PAX1P15863 534 aa15.24■□□□□ 0.03
HSPG2-204ENST00000412328 CBLP22681 906 aa15.24■□□□□ 0.03
HSPG2-204ENST00000412328 FOXD4Q12950 439 aaPredicted RBP15.24■□□□□ 0.03
HSPG2-204ENST00000412328 C9orf135Q5VTT2 229 aa15.24■□□□□ 0.03
HSPG2-204ENST00000412328 OR7E24Q6IFN5 339 aa15.24■□□□□ 0.03
HSPG2-204ENST00000412328 NIPAL3Q6P499 406 aa15.24■□□□□ 0.03
HSPG2-204ENST00000412328 H1FNTQ75WM6 255 aaPredicted RBP15.24■□□□□ 0.03
HSPG2-204ENST00000412328 SSX8Q7RTT4 187 aa15.24■□□□□ 0.03
HSPG2-204ENST00000412328 SLC46A3Q7Z3Q1 461 aa15.24■□□□□ 0.03
HSPG2-204ENST00000412328 ARPINQ7Z6K5 226 aa15.24■□□□□ 0.03
HSPG2-204ENST00000412328 CARM1Q86X55 608 aa15.24■□□□□ 0.03
HSPG2-204ENST00000412328 LRRC75A-AS1Q8N1F1 130 aa15.24■□□□□ 0.03
HSPG2-204ENST00000412328 OR52N5Q8NH56 324 aa15.24■□□□□ 0.03
HSPG2-204ENST00000412328 AKAP1Q92667 903 aaKnown RBP eCLIP15.24■□□□□ 0.03
HSPG2-204ENST00000412328 OXGR1Q96P68 337 aa15.24■□□□□ 0.03
HSPG2-204ENST00000412328 CCL19Q99731 98 aa15.24■□□□□ 0.03
HSPG2-204ENST00000412328 ESRP2Q9H6T0 727 aaKnown RBP15.24■□□□□ 0.03
HSPG2-204ENST00000412328 MEPEQ9NQ76 525 aaPredicted RBP15.24■□□□□ 0.03
HSPG2-204ENST00000412328 MRPL39Q9NYK5 338 aaKnown RBP15.24■□□□□ 0.03
HSPG2-204ENST00000412328 CORINQ9Y5Q5 1042 aa15.24■□□□□ 0.03
HSPG2-204ENST00000412328 ELOVL7A1L3X0 281 aa15.23■□□□□ 0.03
HSPG2-204ENST00000412328 RPL36A-HNRNPH2H7BZ11 118 aa15.23■□□□□ 0.03
HSPG2-204ENST00000412328 FUT4P22083 530 aa15.23■□□□□ 0.03
HSPG2-204ENST00000412328 GTF2E2P29084 291 aaKnown RBP15.23■□□□□ 0.03
HSPG2-204ENST00000412328 KDELR2P33947 212 aa15.23■□□□□ 0.03
HSPG2-204ENST00000412328 SLC7A2P52569 658 aa15.23■□□□□ 0.03
HSPG2-204ENST00000412328 CLDN17P56750 224 aa15.23■□□□□ 0.03
HSPG2-204ENST00000412328 MFSD13AQ14CX5 517 aa15.23■□□□□ 0.03
HSPG2-204ENST00000412328 ZNF74Q16587 644 aa15.23■□□□□ 0.03
HSPG2-204ENST00000412328 ZNF672Q499Z4 452 aaPredicted RBP15.23■□□□□ 0.03
HSPG2-204ENST00000412328 LRRC23Q53EV4 343 aaPredicted RBP15.23■□□□□ 0.03
HSPG2-204ENST00000412328 CYBRD1Q53TN4 286 aa15.23■□□□□ 0.03
HSPG2-204ENST00000412328 PHYHD1Q5SRE7 291 aa15.23■□□□□ 0.03
HSPG2-204ENST00000412328 OR1K1Q8NGR3 316 aa15.23■□□□□ 0.03
HSPG2-204ENST00000412328 OR2M2Q96R28 347 aa15.23■□□□□ 0.03
HSPG2-204ENST00000412328 EPYCQ99645 322 aa15.23■□□□□ 0.03
HSPG2-204ENST00000412328 UPB1Q9UBR1 384 aa15.23■□□□□ 0.03
HSPG2-204ENST00000412328 ZFHX3Q15911 3703 aa15.22■□□□□ 0.03
HSPG2-204ENST00000412328 CIB4A0PJX0 185 aa15.22■□□□□ 0.03
HSPG2-204ENST00000412328 PLPP3O14495 311 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms