RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM5-206	ENST00000409987	PRELP	P51888	382 aa		4.11	□□□□□ -1.75
LSM5-206	ENST00000409987	CDH17	Q12864	832 aa		4.11	□□□□□ -1.75
LSM5-206	ENST00000409987	GPR176	Q14439	515 aa		4.11	□□□□□ -1.75
LSM5-206	ENST00000409987	USF2	Q15853	346 aa	Predicted RBP	4.11	□□□□□ -1.75
LSM5-206	ENST00000409987	ZIC1	Q15915	447 aa		4.11	□□□□□ -1.75
LSM5-206	ENST00000409987	CCL14	Q16627	93 aa		4.11	□□□□□ -1.75
LSM5-206	ENST00000409987	LGSN	Q5TDP6	509 aa		4.11	□□□□□ -1.75
LSM5-206	ENST00000409987	GPR157	Q5UAW9	335 aa		4.11	□□□□□ -1.75
LSM5-206	ENST00000409987	FAM86B1	Q8N7N1	296 aa		4.11	□□□□□ -1.75
LSM5-206	ENST00000409987	C8orf31	Q8N9H6	132 aa		4.11	□□□□□ -1.75
LSM5-206	ENST00000409987	OR52I1	Q8NGK6	324 aa		4.11	□□□□□ -1.75
LSM5-206	ENST00000409987	PLPPR1	Q8TBJ4	325 aa		4.11	□□□□□ -1.75
LSM5-206	ENST00000409987	PDCD6IP	Q8WUM4	868 aa	Known RBP	4.11	□□□□□ -1.75
LSM5-206	ENST00000409987	MRPS31	Q92665	395 aa	Known RBP	4.11	□□□□□ -1.75
LSM5-206	ENST00000409987	KCNA7	Q96RP8	456 aa		4.11	□□□□□ -1.75
LSM5-206	ENST00000409987	VGLL1	Q99990	258 aa		4.11	□□□□□ -1.75
LSM5-206	ENST00000409987	CHCHD5	Q9BSY4	110 aa		4.11	□□□□□ -1.75
LSM5-206	ENST00000409987	TM6SF2	Q9BZW4	377 aa		4.11	□□□□□ -1.75
LSM5-206	ENST00000409987	TUBB1	Q9H4B7	451 aa		4.11	□□□□□ -1.75
LSM5-206	ENST00000409987	ELL3	Q9HB65	397 aa	Predicted RBP	4.11	□□□□□ -1.75
LSM5-206	ENST00000409987	ADGRL4	Q9HBW9	690 aa		4.11	□□□□□ -1.75
LSM5-206	ENST00000409987	UBAP1	Q9NZ09	502 aa		4.11	□□□□□ -1.75
LSM5-206	ENST00000409987	WRAP73	Q9P2S5	460 aa	Predicted RBP	4.11	□□□□□ -1.75
LSM5-206	ENST00000409987	RARRES3	Q9UL19	164 aa		4.11	□□□□□ -1.75
LSM5-206	ENST00000409987	STAP1	Q9ULZ2	295 aa		4.11	□□□□□ -1.75
LSM5-206	ENST00000409987	SPATA2	Q9UM82	520 aa		4.11	□□□□□ -1.75
LSM5-206	ENST00000409987	USP47	Q96K76	1375 aa		4.11	□□□□□ -1.75
LSM5-206	ENST00000409987	C3	P01024	1663 aa		4.1	□□□□□ -1.75
LSM5-206	ENST00000409987		A0A0J9YWU9	116 aa		4.1	□□□□□ -1.75
LSM5-206	ENST00000409987	IQANK1	A0A1B0GTG1	560 aa		4.1	□□□□□ -1.75
LSM5-206	ENST00000409987	BCLAF3	A2AJT9	711 aa	Known RBP	4.1	□□□□□ -1.75
LSM5-206	ENST00000409987	IQCF5	A8MTL0	148 aa		4.1	□□□□□ -1.75
LSM5-206	ENST00000409987	PDZK1P1	A8MUH7	402 aa		4.1	□□□□□ -1.75
LSM5-206	ENST00000409987	SH3BGRL	O75368	114 aa		4.1	□□□□□ -1.75
LSM5-206	ENST00000409987	HCK	P08631	526 aa		4.1	□□□□□ -1.75
LSM5-206	ENST00000409987	FCGR3A	P08637	254 aa		4.1	□□□□□ -1.75
LSM5-206	ENST00000409987	ANXA5	P08758	320 aa		4.1	□□□□□ -1.75
LSM5-206	ENST00000409987	RNH1	P13489	461 aa	Known RBP	4.1	□□□□□ -1.75
LSM5-206	ENST00000409987	CCL2	P13500	99 aa		4.1	□□□□□ -1.75
LSM5-206	ENST00000409987	HPGD	P15428	266 aa		4.1	□□□□□ -1.75
LSM5-206	ENST00000409987	GATA1	P15976	413 aa	Predicted RBP	4.1	□□□□□ -1.75
LSM5-206	ENST00000409987	CD82	P27701	267 aa		4.1	□□□□□ -1.75
LSM5-206	ENST00000409987	DCK	P27707	260 aa		4.1	□□□□□ -1.75
LSM5-206	ENST00000409987	LCN1	P31025	176 aa		4.1	□□□□□ -1.75
LSM5-206	ENST00000409987	XCR1	P46094	333 aa		4.1	□□□□□ -1.75
LSM5-206	ENST00000409987	MRPL19	P49406	292 aa	Known RBP	4.1	□□□□□ -1.75
LSM5-206	ENST00000409987	GSK3B	P49841	420 aa		4.1	□□□□□ -1.75
LSM5-206	ENST00000409987	RIDA	P52758	137 aa	Known RBP	4.1	□□□□□ -1.75
LSM5-206	ENST00000409987	RND3	P61587	244 aa		4.1	□□□□□ -1.75
LSM5-206	ENST00000409987	TPM4	P67936	248 aa		4.1	□□□□□ -1.75
LSM5-206	ENST00000409987	PAX8	Q06710	450 aa		4.1	□□□□□ -1.75
LSM5-206	ENST00000409987	ZNF33B	Q06732	778 aa		4.1	□□□□□ -1.75
LSM5-206	ENST00000409987	COTL1	Q14019	142 aa		4.1	□□□□□ -1.75
LSM5-206	ENST00000409987	GRB7	Q14451	532 aa		4.1	□□□□□ -1.75
LSM5-206	ENST00000409987	ANGPT1	Q15389	498 aa		4.1	□□□□□ -1.75
LSM5-206	ENST00000409987	AANAT	Q16613	207 aa		4.1	□□□□□ -1.75
LSM5-206	ENST00000409987	TRIM16L	Q309B1	348 aa		4.1	□□□□□ -1.75
LSM5-206	ENST00000409987	LY6G6F	Q5SQ64	297 aa		4.1	□□□□□ -1.75
LSM5-206	ENST00000409987	SEL1L2	Q5TEA6	688 aa		4.1	□□□□□ -1.75
LSM5-206	ENST00000409987	COPS6	Q7L5N1	327 aa		4.1	□□□□□ -1.75
LSM5-206	ENST00000409987	PRSS48	Q7RTY5	328 aa		4.1	□□□□□ -1.75
LSM5-206	ENST00000409987	MRPL21	Q7Z2W9	205 aa	Known RBP	4.1	□□□□□ -1.75
LSM5-206	ENST00000409987	ABHD12	Q8N2K0	398 aa		4.1	□□□□□ -1.75
LSM5-206	ENST00000409987		Q8N377	158 aa		4.1	□□□□□ -1.75
LSM5-206	ENST00000409987	SAMD12	Q8N8I0	201 aa		4.1	□□□□□ -1.75
LSM5-206	ENST00000409987	CATSPER1	Q8NEC5	780 aa		4.1	□□□□□ -1.75
LSM5-206	ENST00000409987	OR51L1	Q8NGJ5	315 aa		4.1	□□□□□ -1.75
LSM5-206	ENST00000409987	FNDC8	Q8TC99	324 aa		4.1	□□□□□ -1.75
LSM5-206	ENST00000409987	TAF15	Q92804	592 aa	Known RBP eCLIP	4.1	□□□□□ -1.75
LSM5-206	ENST00000409987	TOMM40L	Q969M1	308 aa		4.1	□□□□□ -1.75
LSM5-206	ENST00000409987	FAF2	Q96CS3	445 aa		4.1	□□□□□ -1.75
LSM5-206	ENST00000409987	WBP1	Q96G27	269 aa		4.1	□□□□□ -1.75
LSM5-206	ENST00000409987	CATSPER2	Q96P56	530 aa		4.1	□□□□□ -1.75
LSM5-206	ENST00000409987	OPALIN	Q96PE5	141 aa		4.1	□□□□□ -1.75
LSM5-206	ENST00000409987	TRNT1	Q96Q11	434 aa	Known RBP	4.1	□□□□□ -1.75
LSM5-206	ENST00000409987	RNF2	Q99496	336 aa		4.1	□□□□□ -1.75
LSM5-206	ENST00000409987	ATF6B	Q99941	703 aa		4.1	□□□□□ -1.75
LSM5-206	ENST00000409987	HSD17B14	Q9BPX1	270 aa		4.1	□□□□□ -1.75
LSM5-206	ENST00000409987	ACBD6	Q9BR61	282 aa		4.1	□□□□□ -1.75
LSM5-206	ENST00000409987	LLPH	Q9BRT6	129 aa	Known RBP	4.1	□□□□□ -1.75
LSM5-206	ENST00000409987	ZNF670	Q9BS34	389 aa		4.1	□□□□□ -1.75
LSM5-206	ENST00000409987	RNF41	Q9H4P4	317 aa	Predicted RBP	4.1	□□□□□ -1.75
LSM5-206	ENST00000409987	MEPE	Q9NQ76	525 aa	Predicted RBP	4.1	□□□□□ -1.75
LSM5-206	ENST00000409987	ZNF446	Q9NWS9	450 aa		4.1	□□□□□ -1.75
LSM5-206	ENST00000409987	MYEF2	Q9P2K5	600 aa	Known RBP	4.1	□□□□□ -1.75
LSM5-206	ENST00000409987	CTSF	Q9UBX1	484 aa		4.1	□□□□□ -1.75
LSM5-206	ENST00000409987	MGAT4A	Q9UM21	535 aa		4.1	□□□□□ -1.75
LSM5-206	ENST00000409987	AUP1	Q9Y679	476 aa		4.1	□□□□□ -1.75
LSM5-206	ENST00000409987	SH3TC1	Q8TE82	1336 aa		4.1	□□□□□ -1.75
LSM5-206	ENST00000409987	SCAPER	Q9BY12	1400 aa		4.1	□□□□□ -1.75
LSM5-206	ENST00000409987	AGL	P35573	1532 aa		4.1	□□□□□ -1.75
LSM5-206	ENST00000409987	LRRC7	Q96NW7	1537 aa		4.1	□□□□□ -1.75
LSM5-206	ENST00000409987	TRBV9	A0A0B4J1U6	114 aa		4.09	□□□□□ -1.75
LSM5-206	ENST00000409987	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	4.09	□□□□□ -1.75
LSM5-206	ENST00000409987	TEX48	A0A1B0GUV7	120 aa		4.09	□□□□□ -1.75
LSM5-206	ENST00000409987	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	4.09	□□□□□ -1.75
LSM5-206	ENST00000409987	PP2D1	A8MPX8	630 aa		4.09	□□□□□ -1.75
LSM5-206	ENST00000409987	TRDC	B7Z8K6	153 aa		4.09	□□□□□ -1.75
LSM5-206	ENST00000409987	SIRPB1	O00241	398 aa		4.09	□□□□□ -1.75
LSM5-206	ENST00000409987	AIM2	O14862	343 aa		4.09	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms