RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 CLDN20P56880 219 aa24.68■■□□□ 1.54
CPNE1-203ENST00000397442 ERVK-25P63136 954 aa24.68■■□□□ 1.54
CPNE1-203ENST00000397442 MS4A18Q3C1V0 323 aa24.68■■□□□ 1.54
CPNE1-203ENST00000397442 KCTD21Q4G0X4 260 aa24.68■■□□□ 1.54
CPNE1-203ENST00000397442 BPIFB6Q8NFQ5 453 aa24.68■■□□□ 1.54
CPNE1-203ENST00000397442 EXTL1Q92935 676 aa24.68■■□□□ 1.54
CPNE1-203ENST00000397442 KLHL15Q96M94 604 aa24.68■■□□□ 1.54
CPNE1-203ENST00000397442 SLC6A15Q9H2J7 730 aa24.68■■□□□ 1.54
CPNE1-203ENST00000397442 ACKR4Q9NPB9 350 aa24.68■■□□□ 1.54
CPNE1-203ENST00000397442 CHST11Q9NPF2 352 aa24.68■■□□□ 1.54
CPNE1-203ENST00000397442 PCDHGB7Q9Y5F8 929 aa24.68■■□□□ 1.54
CPNE1-203ENST00000397442 H0YC42 278 aa24.67■■□□□ 1.54
CPNE1-203ENST00000397442 LINC01387J3KSC0 135 aa24.67■■□□□ 1.54
CPNE1-203ENST00000397442 SULT2B1O00204 365 aa24.67■■□□□ 1.54
CPNE1-203ENST00000397442 AKR7A3O95154 331 aa24.67■■□□□ 1.54
CPNE1-203ENST00000397442 CCDC159P0C7I6 412 aa24.67■■□□□ 1.54
CPNE1-203ENST00000397442 STARP49675 285 aa24.67■■□□□ 1.54
CPNE1-203ENST00000397442 P2RY4P51582 365 aa24.67■■□□□ 1.54
CPNE1-203ENST00000397442 CTXN1P60606 82 aa24.67■■□□□ 1.54
CPNE1-203ENST00000397442 OCLNQ16625 522 aa24.67■■□□□ 1.54
CPNE1-203ENST00000397442 Q6ZS92 163 aa24.67■■□□□ 1.54
CPNE1-203ENST00000397442 MFRPQ9BY79 579 aa24.67■■□□□ 1.54
CPNE1-203ENST00000397442 ZDHHC11Q9H8X9 412 aa24.67■■□□□ 1.54
CPNE1-203ENST00000397442 DNAJC27Q9NZQ0 273 aa24.67■■□□□ 1.54
CPNE1-203ENST00000397442 B3GALT5Q9Y2C3 310 aa24.67■■□□□ 1.54
CPNE1-203ENST00000397442 GJE1A6NN92 205 aa24.66■■□□□ 1.54
CPNE1-203ENST00000397442 ACOT7O00154 380 aa24.66■■□□□ 1.54
CPNE1-203ENST00000397442 ENTPD6O75354 484 aa24.66■■□□□ 1.54
CPNE1-203ENST00000397442 APEHP13798 732 aaKnown RBP24.66■■□□□ 1.54
CPNE1-203ENST00000397442 GTF2E2P29084 291 aaKnown RBP24.66■■□□□ 1.54
CPNE1-203ENST00000397442 OR2B6P58173 313 aa24.66■■□□□ 1.54
CPNE1-203ENST00000397442 ZP4Q12836 540 aa24.66■■□□□ 1.54
CPNE1-203ENST00000397442 ZNF169Q14929 603 aaPredicted RBP24.66■■□□□ 1.54
CPNE1-203ENST00000397442 ARHGAP11AQ6P4F7 1023 aa24.66■■□□□ 1.54
CPNE1-203ENST00000397442 TRILQ7L0X0 811 aa24.66■■□□□ 1.54
CPNE1-203ENST00000397442 RBMXL3Q8N7X1 1067 aaKnown RBP24.66■■□□□ 1.54
CPNE1-203ENST00000397442 ABHD17AQ96GS6 310 aa24.66■■□□□ 1.54
CPNE1-203ENST00000397442 LRR1Q96L50 414 aa24.66■■□□□ 1.54
CPNE1-203ENST00000397442 C11orf98E9PRG8 122 aa24.66■■□□□ 1.54
CPNE1-203ENST00000397442 NOS3P29474 1203 aa24.66■■□□□ 1.54
CPNE1-203ENST00000397442 SUCLG1P53597 346 aaKnown RBP24.66■■□□□ 1.54
CPNE1-203ENST00000397442 CLDN15P56746 228 aa24.66■■□□□ 1.54
CPNE1-203ENST00000397442 TOP3AQ13472 1001 aaPredicted RBP24.66■■□□□ 1.54
CPNE1-203ENST00000397442 SLC10A1Q14973 349 aa24.66■■□□□ 1.54
CPNE1-203ENST00000397442 TMEM99Q8N816 258 aa24.66■■□□□ 1.54
CPNE1-203ENST00000397442 FAM98AQ8NCA5 519 aaKnown RBP24.66■■□□□ 1.54
CPNE1-203ENST00000397442 ADPRHL1Q8NDY3 354 aa24.66■■□□□ 1.54
CPNE1-203ENST00000397442 SGCDQ92629 289 aa24.66■■□□□ 1.54
CPNE1-203ENST00000397442 PLEKHA8Q96JA3 519 aa24.66■■□□□ 1.54
CPNE1-203ENST00000397442 ADGRG7Q96K78 797 aa24.66■■□□□ 1.54
CPNE1-203ENST00000397442 RHNO1Q9BSD3 238 aa24.66■■□□□ 1.54
CPNE1-203ENST00000397442 FANCFQ9NPI8 374 aa24.66■■□□□ 1.54
CPNE1-203ENST00000397442 HINT3Q9NQE9 182 aaKnown RBP24.66■■□□□ 1.54
CPNE1-203ENST00000397442 PLCXD1Q9NUJ7 323 aa24.66■■□□□ 1.54
CPNE1-203ENST00000397442 PAK1IP1Q9NWT1 392 aaPredicted RBP24.66■■□□□ 1.54
CPNE1-203ENST00000397442 CLN6Q9NWW5 311 aa24.66■■□□□ 1.54
CPNE1-203ENST00000397442 ZNF814B7Z6K7 855 aa24.65■■□□□ 1.54
CPNE1-203ENST00000397442 TNFSF11O14788 317 aa24.65■■□□□ 1.54
CPNE1-203ENST00000397442 IDH3BO43837 385 aa24.65■■□□□ 1.54
CPNE1-203ENST00000397442 HIST1H1CP16403 213 aaKnown RBP24.65■■□□□ 1.54
CPNE1-203ENST00000397442 AHCYP23526 432 aa24.65■■□□□ 1.54
CPNE1-203ENST00000397442 NUDT6P53370 316 aa24.65■■□□□ 1.54
CPNE1-203ENST00000397442 CXADRP78310 365 aa24.65■■□□□ 1.54
CPNE1-203ENST00000397442 SLC35A1P78382 337 aa24.65■■□□□ 1.54
CPNE1-203ENST00000397442 H3F3AP84243 136 aa24.65■■□□□ 1.54
CPNE1-203ENST00000397442 PUDPQ08623 228 aa24.65■■□□□ 1.54
CPNE1-203ENST00000397442 ZNF239Q16600 458 aaKnown RBP24.65■■□□□ 1.54
CPNE1-203ENST00000397442 KDM8Q8N371 416 aa24.65■■□□□ 1.54
CPNE1-203ENST00000397442 Q96M85 177 aa24.65■■□□□ 1.54
CPNE1-203ENST00000397442 TSPAN32Q96QS1 320 aa24.65■■□□□ 1.54
CPNE1-203ENST00000397442 AMBNQ9NP70 447 aa24.65■■□□□ 1.54
CPNE1-203ENST00000397442 INIPQ9NRY2 104 aa24.65■■□□□ 1.54
CPNE1-203ENST00000397442 LIPGQ9Y5X9 500 aa24.65■■□□□ 1.54
CPNE1-203ENST00000397442 CHD8Q9HCK8 2581 aa24.65■■□□□ 1.54
CPNE1-203ENST00000397442 ZNF407Q9C0G0 2248 aa24.64■■□□□ 1.54
CPNE1-203ENST00000397442 SH3D21A4FU49 640 aa24.64■■□□□ 1.53
CPNE1-203ENST00000397442 RNF13O43567 381 aa24.64■■□□□ 1.53
CPNE1-203ENST00000397442 OR6A2O95222 327 aa24.64■■□□□ 1.53
CPNE1-203ENST00000397442 TXNDC12O95881 172 aa24.64■■□□□ 1.53
CPNE1-203ENST00000397442 ITGB2P05107 769 aa24.64■■□□□ 1.53
CPNE1-203ENST00000397442 SMIM18P0DKX4 95 aa24.64■■□□□ 1.53
CPNE1-203ENST00000397442 KLK2P20151 261 aa24.64■■□□□ 1.53
CPNE1-203ENST00000397442 POU3F2P20265 443 aaPredicted RBP24.64■■□□□ 1.53
CPNE1-203ENST00000397442 LHX2P50458 406 aa24.64■■□□□ 1.53
CPNE1-203ENST00000397442 CDH15P55291 814 aa24.64■■□□□ 1.53
CPNE1-203ENST00000397442 AADACL4Q5VUY2 407 aa24.64■■□□□ 1.53
CPNE1-203ENST00000397442 ZCCHC14Q8WYQ9 949 aaKnown RBP24.64■■□□□ 1.53
CPNE1-203ENST00000397442 RASD2Q96D21 266 aa24.64■■□□□ 1.53
CPNE1-203ENST00000397442 ZNF582Q96NG8 517 aaPredicted RBP24.64■■□□□ 1.53
CPNE1-203ENST00000397442 NDEL1Q9GZM8 345 aa24.64■■□□□ 1.53
CPNE1-203ENST00000397442 FN3KQ9H479 309 aa24.64■■□□□ 1.53
CPNE1-203ENST00000397442 B3GAT1Q9P2W7 334 aa24.64■■□□□ 1.53
CPNE1-203ENST00000397442 HLA-DOBP13765 273 aa24.63■■□□□ 1.53
CPNE1-203ENST00000397442 CSNK2BP67870 215 aa24.63■■□□□ 1.53
CPNE1-203ENST00000397442 ESPNLQ6ZVH7 1005 aa24.63■■□□□ 1.53
CPNE1-203ENST00000397442 OR4K13Q8NH42 304 aa24.63■■□□□ 1.53
CPNE1-203ENST00000397442 Q96MT0 163 aa24.63■■□□□ 1.53
CPNE1-203ENST00000397442 DEFB127Q9H1M4 99 aa24.63■■□□□ 1.53
CPNE1-203ENST00000397442 KIAA1549Q9HCM3 1950 aa24.63■■□□□ 1.53
CPNE1-203ENST00000397442 TEX13CA0A0J9YWL9 993 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms