RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 ST6GALNAC2Q9UJ37 374 aa13.58□□□□□ -0.24
CBX3-202ENST00000396386 SEC16AO15027 2179 aa13.58□□□□□ -0.24
CBX3-202ENST00000396386 TMED7-TICAM2A0A0A6YYA0 188 aa13.57□□□□□ -0.24
CBX3-202ENST00000396386 CPNE3O75131 537 aaKnown RBP13.57□□□□□ -0.24
CBX3-202ENST00000396386 DLGAP3O95886 979 aa13.57□□□□□ -0.24
CBX3-202ENST00000396386 FGF5P12034 268 aa13.57□□□□□ -0.24
CBX3-202ENST00000396386 MYL9P24844 172 aa13.57□□□□□ -0.24
CBX3-202ENST00000396386 HCCSP53701 268 aa13.57□□□□□ -0.24
CBX3-202ENST00000396386 TRIM61Q5EBN2 209 aa13.57□□□□□ -0.24
CBX3-202ENST00000396386 MZT2AQ6P582 158 aa13.57□□□□□ -0.24
CBX3-202ENST00000396386 FAM131AQ6UXB0 335 aa13.57□□□□□ -0.24
CBX3-202ENST00000396386 RPTNQ6XPR3 784 aa13.57□□□□□ -0.24
CBX3-202ENST00000396386 MAMDC2Q7Z304 686 aaPredicted RBP13.57□□□□□ -0.24
CBX3-202ENST00000396386 SNX33Q8WV41 574 aa13.57□□□□□ -0.24
CBX3-202ENST00000396386 ZNRF4Q8WWF5 429 aa13.57□□□□□ -0.24
CBX3-202ENST00000396386 TMCO6Q96DC7 493 aa13.57□□□□□ -0.24
CBX3-202ENST00000396386 DIRAS2Q96HU8 199 aa13.57□□□□□ -0.24
CBX3-202ENST00000396386 PGLYRP3Q96LB9 341 aa13.57□□□□□ -0.24
CBX3-202ENST00000396386 TSPAN32Q96QS1 320 aa13.57□□□□□ -0.24
CBX3-202ENST00000396386 ATF6BQ99941 703 aa13.57□□□□□ -0.24
CBX3-202ENST00000396386 WDR77Q9BQA1 342 aaPredicted RBP13.57□□□□□ -0.24
CBX3-202ENST00000396386 ALG12Q9BV10 488 aa13.57□□□□□ -0.24
CBX3-202ENST00000396386 RNF32Q9H0A6 362 aa13.57□□□□□ -0.24
CBX3-202ENST00000396386 MOKQ9UQ07 419 aa13.57□□□□□ -0.24
CBX3-202ENST00000396386 TMED7Q9Y3B3 224 aa13.57□□□□□ -0.24
CBX3-202ENST00000396386 GRIP1Q9Y3R0 1128 aa13.57□□□□□ -0.24
CBX3-202ENST00000396386 TMEM72A0PK05 275 aa13.57□□□□□ -0.24
CBX3-202ENST00000396386 DVL2O14641 736 aa13.57□□□□□ -0.24
CBX3-202ENST00000396386 ADAM10O14672 748 aa13.57□□□□□ -0.24
CBX3-202ENST00000396386 NCR1O76036 304 aa13.57□□□□□ -0.24
CBX3-202ENST00000396386 AZGP1P25311 298 aaKnown RBP13.57□□□□□ -0.24
CBX3-202ENST00000396386 SUMO3P55854 103 aaPredicted RBP13.57□□□□□ -0.24
CBX3-202ENST00000396386 FBXW4P57775 412 aa13.57□□□□□ -0.24
CBX3-202ENST00000396386 IL11RAQ14626 422 aa13.57□□□□□ -0.24
CBX3-202ENST00000396386 CDK5R1Q15078 307 aa13.57□□□□□ -0.24
CBX3-202ENST00000396386 COL28A1Q2UY09 1125 aa13.57□□□□□ -0.24
CBX3-202ENST00000396386 MESTQ5EB52 335 aa13.57□□□□□ -0.24
CBX3-202ENST00000396386 LINC01590Q5TEZ4 76 aa13.57□□□□□ -0.24
CBX3-202ENST00000396386 C16orf47Q6ZP98 133 aaPredicted RBP13.57□□□□□ -0.24
CBX3-202ENST00000396386 EXD3Q8N9H8 876 aa13.57□□□□□ -0.24
CBX3-202ENST00000396386 OR5L2Q8NGL0 311 aa13.57□□□□□ -0.24
CBX3-202ENST00000396386 OR8K3Q8NH51 312 aa13.57□□□□□ -0.24
CBX3-202ENST00000396386 SETD6Q8TBK2 473 aa13.57□□□□□ -0.24
CBX3-202ENST00000396386 DUSP19Q8WTR2 217 aa13.57□□□□□ -0.24
CBX3-202ENST00000396386 THAP3Q8WTV1 239 aaPredicted RBP13.57□□□□□ -0.24
CBX3-202ENST00000396386 HTRA1Q92743 480 aa13.57□□□□□ -0.24
CBX3-202ENST00000396386 KIAA1143Q96AT1 154 aaPredicted RBP13.57□□□□□ -0.24
CBX3-202ENST00000396386 PELI1Q96FA3 418 aa13.57□□□□□ -0.24
CBX3-202ENST00000396386 PTDSS2Q9BVG9 487 aa13.57□□□□□ -0.24
CBX3-202ENST00000396386 C14orf119Q9NWQ9 140 aa13.57□□□□□ -0.24
CBX3-202ENST00000396386 NCDNQ9UBB6 729 aa13.57□□□□□ -0.24
CBX3-202ENST00000396386 COPS3Q9UNS2 423 aa13.57□□□□□ -0.24
CBX3-202ENST00000396386 C4orf47A7E2U8 309 aa13.56□□□□□ -0.24
CBX3-202ENST00000396386 A8MVM7 634 aa13.56□□□□□ -0.24
CBX3-202ENST00000396386 OGG1O15527 345 aa13.56□□□□□ -0.24
CBX3-202ENST00000396386 RENP00797 406 aa13.56□□□□□ -0.24
CBX3-202ENST00000396386 ACVR1BP36896 505 aa13.56□□□□□ -0.24
CBX3-202ENST00000396386 HTR3AP46098 478 aa13.56□□□□□ -0.24
CBX3-202ENST00000396386 TRA2AQ13595 282 aaKnown RBP eCLIP13.56□□□□□ -0.242e-11■■■■■ 49.5
CBX3-202ENST00000396386 GLYR1Q49A26 553 aaPredicted RBP13.56□□□□□ -0.24
CBX3-202ENST00000396386 ZMAT1Q5H9K5 638 aa13.56□□□□□ -0.24
CBX3-202ENST00000396386 FAM69AQ5T7M9 428 aa13.56□□□□□ -0.24
CBX3-202ENST00000396386 XKRXQ6PP77 449 aa13.56□□□□□ -0.24
CBX3-202ENST00000396386 TMEM205Q6UW68 189 aa13.56□□□□□ -0.24
CBX3-202ENST00000396386 C5orf46Q6UWT4 87 aa13.56□□□□□ -0.24
CBX3-202ENST00000396386 MS4A15Q8N5U1 240 aa13.56□□□□□ -0.24
CBX3-202ENST00000396386 TMEM234Q8WY98 164 aa13.56□□□□□ -0.24
CBX3-202ENST00000396386 HGDQ93099 445 aa13.56□□□□□ -0.24
CBX3-202ENST00000396386 SMIM19Q96E16 107 aa13.56□□□□□ -0.24
CBX3-202ENST00000396386 CTRCQ99895 268 aa13.56□□□□□ -0.24
CBX3-202ENST00000396386 RXFP3Q9NSD7 469 aa13.56□□□□□ -0.24
CBX3-202ENST00000396386 COMMD3Q9UBI1 195 aa13.56□□□□□ -0.24
CBX3-202ENST00000396386 GNG8Q9UK08 70 aa13.56□□□□□ -0.24
CBX3-202ENST00000396386 ADAM30Q9UKF2 790 aa13.56□□□□□ -0.24
CBX3-202ENST00000396386 FABP12A6NFH5 140 aa13.55□□□□□ -0.24
CBX3-202ENST00000396386 ANKUB1A6NFN9 424 aa13.55□□□□□ -0.24
CBX3-202ENST00000396386 MEN1O00255 615 aa13.55□□□□□ -0.24
CBX3-202ENST00000396386 NTN3O00634 580 aaPredicted RBP13.55□□□□□ -0.24
CBX3-202ENST00000396386 NPIPB7O75200 414 aa13.55□□□□□ -0.24
CBX3-202ENST00000396386 AHSA1O95433 338 aa13.55□□□□□ -0.24
CBX3-202ENST00000396386 SERPINA3P01011 423 aa13.55□□□□□ -0.24
CBX3-202ENST00000396386 APOA1P02647 267 aa13.55□□□□□ -0.24
CBX3-202ENST00000396386 SYPP08247 313 aa13.55□□□□□ -0.24
CBX3-202ENST00000396386 NAGAP17050 411 aa13.55□□□□□ -0.24
CBX3-202ENST00000396386 GDI2P50395 445 aaKnown RBP13.55□□□□□ -0.24
CBX3-202ENST00000396386 SGCBQ16585 318 aa13.55□□□□□ -0.24
CBX3-202ENST00000396386 C1orf140Q5VVS0 124 aa13.55□□□□□ -0.24
CBX3-202ENST00000396386 LCN10Q6JVE6 187 aa13.55□□□□□ -0.24
CBX3-202ENST00000396386 SLC23A3Q6PIS1 610 aa13.55□□□□□ -0.24
CBX3-202ENST00000396386 SLC16A9Q7RTY1 509 aa13.55□□□□□ -0.24
CBX3-202ENST00000396386 CEACAM19Q7Z692 300 aa13.55□□□□□ -0.24
CBX3-202ENST00000396386 NLGN4YQ8NFZ3 816 aaPredicted RBP13.55□□□□□ -0.24
CBX3-202ENST00000396386 OR2T4Q8NH00 348 aa13.55□□□□□ -0.24
CBX3-202ENST00000396386 ABHD4Q8TB40 342 aa13.55□□□□□ -0.24
CBX3-202ENST00000396386 STK35Q8TDR2 534 aa13.55□□□□□ -0.24
CBX3-202ENST00000396386 THAP4Q8WY91 577 aa13.55□□□□□ -0.24
CBX3-202ENST00000396386 ACOT12Q8WYK0 555 aa13.55□□□□□ -0.24
CBX3-202ENST00000396386 NECAB3Q96P71 396 aaPredicted RBP13.55□□□□□ -0.24
CBX3-202ENST00000396386 GTPBP2Q9BX10 602 aaKnown RBP13.55□□□□□ -0.24
CBX3-202ENST00000396386 NXT1Q9UKK6 140 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms