RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 GON7Q9BXV9 100 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 NPAP1Q9NZP6 1156 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 DLEC1Q9Y238 1755 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 C4orf47A7E2U8 309 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 RRP8O43159 456 aaKnown RBP5.07□□□□□ -1.6
VPS13C-204ENST00000395898 F11P03951 625 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 ENPP1P22413 925 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 PSMB10P40306 273 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 CHRNEQ04844 493 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 MOB3CQ70IA8 216 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 OR4N2Q8NGD1 307 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 MS4A8Q9BY19 250 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 PISDQ9UG56 409 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 PRELID3BQ9Y3B1 194 aa5.07□□□□□ -1.6
VPS13C-204ENST00000395898 TRAV36DV7A0A075B6V5 113 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 NPIPA5A0A0B4J1W7 369 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 TMEM82A0PJX8 343 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 NPIPA7E9PJI5 369 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 B4GAT1O43505 415 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 SLC35E2P0CK97 266 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 NPIPA8P0DM63 369 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 CD79BP40259 229 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 SLC1A3P43003 542 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 ERVFC1P60507 584 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 SIRPAP78324 504 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 BPIFB2Q8N4F0 458 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 SLC22A24Q8N4F4 322 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 OR11L1Q8NGX0 322 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 KCNG3Q8TAE7 436 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 RPS10P5Q9NQ39 176 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 ZNF223Q9UK11 482 aaPredicted RBP5.06□□□□□ -1.6
VPS13C-204ENST00000395898 MYO16Q9Y6X6 1858 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 TUBGCP6Q96RT7 1819 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 TRBV4-1A0A0J9YWV2 114 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 LRRC30A6NM36 301 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 OR6C76A6NM76 312 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 KLRC4-KLRK1H3BQV0 150 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 J3KTA2 159 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 OR7C1O76099 320 aaPredicted RBP5.06□□□□□ -1.6
VPS13C-204ENST00000395898 HBE1P02100 147 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 CLDN6P56747 220 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 RPS18P62269 152 aaKnown RBP5.06□□□□□ -1.6
VPS13C-204ENST00000395898 EEF1A2Q05639 463 aaKnown RBP5.06□□□□□ -1.6
VPS13C-204ENST00000395898 MGAT3Q09327 533 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 HMGN3Q15651 99 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 SYPL1Q16563 259 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 MED25Q71SY5 747 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 UBTD2Q8WUN7 234 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 SLC38A1Q9H2H9 487 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 PLEKHM1Q9Y4G2 1056 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 SSC5DA1L4H1 1573 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 ANKRD31Q8N7Z5 1873 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 A0A1B0GTW7 788 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 RAB19A4D1S5 217 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 HIDE1A8MVS5 230 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 CBX7O95931 251 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 WNT11O96014 354 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 PSMB5P28074 263 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 TACR3P29371 465 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 GJA5P36382 358 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 OR1D4P47884 311 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 GRB2P62993 217 aaKnown RBP5.06□□□□□ -1.6
VPS13C-204ENST00000395898 SVBPQ8N300 66 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 SLC25A21Q9BQT8 299 aaPredicted RBP5.06□□□□□ -1.6
VPS13C-204ENST00000395898 OR51B6Q9H340 312 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 NRIP3Q9NQ35 241 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 ANKRD34BA5PLL1 514 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 ZNF587BE7ETH6 402 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 SURF4O15260 269 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 CTNSO60931 367 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 STK17BO94768 372 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 MAOBP27338 520 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 HLA-DMAP28067 261 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 GABRA2P47869 451 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 SNRPD2P62316 118 aaKnown RBP5.06□□□□□ -1.6
VPS13C-204ENST00000395898 GJC3Q8NFK1 279 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 FBXO27Q8NI29 283 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 HAS2Q92819 552 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 EGLN2Q96KS0 407 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 ZNF334Q9HCZ1 680 aaPredicted RBP5.06□□□□□ -1.6
VPS13C-204ENST00000395898 CEBPZOSA8MTT3 80 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 GABARAPH6UMI1 98 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 GABARAPO95166 117 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 GABRB3P28472 473 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 SLC6A11P48066 632 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 DBPQ10586 325 aaPredicted RBP5.06□□□□□ -1.6
VPS13C-204ENST00000395898 MBTPS1Q14703 1052 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 EMC4Q5J8M3 183 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 SLC22A25Q6T423 547 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 WDR88Q6ZMY6 472 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 SLCO4C1Q6ZQN7 724 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 PAQR9Q6ZVX9 377 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 COX15Q7KZN9 410 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 DMBX1Q8NFW5 382 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 ELSPBP1Q96BH3 223 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 ZNF486Q96H40 463 aaPredicted RBP5.06□□□□□ -1.6
VPS13C-204ENST00000395898 IP6K3Q96PC2 410 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 MACROD1Q9BQ69 325 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 ALG12Q9BV10 488 aa5.06□□□□□ -1.6
VPS13C-204ENST00000395898 ACKR4Q9NPB9 350 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms