RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 C12orf71A8MTZ7 269 aa-0.3□□□□□ -2.46
RNU6-239P-201ENST00000390990 C12orf77C9JDV5 145 aa-0.3□□□□□ -2.46
RNU6-239P-201ENST00000390990 E9PMD0 336 aa-0.3□□□□□ -2.46
RNU6-239P-201ENST00000390990 H3BNH8 94 aa-0.3□□□□□ -2.46
RNU6-239P-201ENST00000390990 SGK494L7N484 410 aa-0.3□□□□□ -2.46
RNU6-239P-201ENST00000390990 GCM2O75603 506 aaPredicted RBP-0.3□□□□□ -2.46
RNU6-239P-201ENST00000390990 RP2O75695 350 aa-0.3□□□□□ -2.46
RNU6-239P-201ENST00000390990 UGT2B17O75795 530 aa-0.3□□□□□ -2.46
RNU6-239P-201ENST00000390990 NDUFA7O95182 113 aa-0.3□□□□□ -2.46
RNU6-239P-201ENST00000390990 STAMBPO95630 424 aa-0.3□□□□□ -2.46
RNU6-239P-201ENST00000390990 SMIM10L1P0DMW3 83 aa-0.3□□□□□ -2.46
RNU6-239P-201ENST00000390990 AREGP15514 252 aa-0.3□□□□□ -2.46
RNU6-239P-201ENST00000390990 PTPN6P29350 595 aa-0.3□□□□□ -2.46
RNU6-239P-201ENST00000390990 CALCRP30988 508 aa-0.3□□□□□ -2.46
RNU6-239P-201ENST00000390990 LEPP41159 167 aa-0.3□□□□□ -2.46
RNU6-239P-201ENST00000390990 SYKP43405 635 aa-0.3□□□□□ -2.46
RNU6-239P-201ENST00000390990 CDH4P55283 916 aa-0.3□□□□□ -2.46
RNU6-239P-201ENST00000390990 IFT88Q13099 833 aa-0.3□□□□□ -2.46
RNU6-239P-201ENST00000390990 CHI3L2Q15782 390 aa-0.3□□□□□ -2.46
RNU6-239P-201ENST00000390990 HFEQ30201 348 aa-0.3□□□□□ -2.46
RNU6-239P-201ENST00000390990 SMUG1Q53HV7 270 aa-0.3□□□□□ -2.46
RNU6-239P-201ENST00000390990 PYDC2Q56P42 97 aa-0.3□□□□□ -2.46
RNU6-239P-201ENST00000390990 C16orf47Q6ZP98 133 aaPredicted RBP-0.3□□□□□ -2.46
RNU6-239P-201ENST00000390990 KCTD9Q7L273 389 aa-0.3□□□□□ -2.46
RNU6-239P-201ENST00000390990 APTXQ7Z2E3 356 aaKnown RBP-0.3□□□□□ -2.46
RNU6-239P-201ENST00000390990 C15orf54Q8N8G6 183 aa-0.3□□□□□ -2.46
RNU6-239P-201ENST00000390990 IPMKQ8NFU5 416 aa-0.3□□□□□ -2.46
RNU6-239P-201ENST00000390990 DEPDC1BQ8WUY9 529 aa-0.3□□□□□ -2.46
RNU6-239P-201ENST00000390990 TM4SF18Q96CE8 201 aa-0.3□□□□□ -2.46
RNU6-239P-201ENST00000390990 SMIM10Q96HG1 83 aa-0.3□□□□□ -2.46
RNU6-239P-201ENST00000390990 CSPG4P5Q96PW8 444 aa-0.3□□□□□ -2.46
RNU6-239P-201ENST00000390990 MRPL9Q9BYD2 267 aaKnown RBP-0.3□□□□□ -2.46
RNU6-239P-201ENST00000390990 RNF167Q9H6Y7 350 aa-0.3□□□□□ -2.46
RNU6-239P-201ENST00000390990 ZNF442Q9H7R0 627 aa-0.3□□□□□ -2.46
RNU6-239P-201ENST00000390990 MRPL39Q9NYK5 338 aaKnown RBP-0.3□□□□□ -2.46
RNU6-239P-201ENST00000390990 ZNF490Q9ULM2 529 aaPredicted RBP-0.3□□□□□ -2.46
RNU6-239P-201ENST00000390990 SNX5Q9Y5X3 404 aa-0.3□□□□□ -2.46
RNU6-239P-201ENST00000390990 IGHV3-74A0A0B4J1X5 117 aa-0.31□□□□□ -2.46
RNU6-239P-201ENST00000390990 IGHV2-70DA0A0C4DH43 119 aa-0.31□□□□□ -2.46
RNU6-239P-201ENST00000390990 A0A0U1RQV1 116 aa-0.31□□□□□ -2.46
RNU6-239P-201ENST00000390990 CCDC22O60826 627 aa-0.31□□□□□ -2.46
RNU6-239P-201ENST00000390990 TRIM16O95361 564 aa-0.31□□□□□ -2.46
RNU6-239P-201ENST00000390990 F10P00742 488 aa-0.31□□□□□ -2.46
RNU6-239P-201ENST00000390990 ALDOBP05062 364 aa-0.31□□□□□ -2.46
RNU6-239P-201ENST00000390990 CSF3P09919 207 aa-0.31□□□□□ -2.46
RNU6-239P-201ENST00000390990 GKN3PP0CG01 181 aa-0.31□□□□□ -2.46
RNU6-239P-201ENST00000390990 KRT20P35900 424 aa-0.31□□□□□ -2.46
RNU6-239P-201ENST00000390990 CSNK1A1P48729 337 aa-0.31□□□□□ -2.46
RNU6-239P-201ENST00000390990 RIPK1Q13546 671 aa-0.31□□□□□ -2.46
RNU6-239P-201ENST00000390990 ZBED5Q49AG3 693 aa-0.31□□□□□ -2.46
RNU6-239P-201ENST00000390990 AARDQ4LEZ3 155 aa-0.31□□□□□ -2.46
RNU6-239P-201ENST00000390990 CEMP1Q6PRD7 247 aaPredicted RBP-0.31□□□□□ -2.46
RNU6-239P-201ENST00000390990 C16orf54Q6UWD8 224 aa-0.31□□□□□ -2.46
RNU6-239P-201ENST00000390990 Q6ZN92 141 aa-0.31□□□□□ -2.46
RNU6-239P-201ENST00000390990 STRADAQ7RTN6 431 aa-0.31□□□□□ -2.46
RNU6-239P-201ENST00000390990 KRTAP19-3Q7Z4W3 81 aa-0.31□□□□□ -2.46
RNU6-239P-201ENST00000390990 SLC26A11Q86WA9 606 aa-0.31□□□□□ -2.46
RNU6-239P-201ENST00000390990 SERPINA12Q8IW75 414 aa-0.31□□□□□ -2.46
RNU6-239P-201ENST00000390990 UNC45BQ8IWX7 931 aa-0.31□□□□□ -2.46
RNU6-239P-201ENST00000390990 LRRC43Q8N309 656 aa-0.31□□□□□ -2.46
RNU6-239P-201ENST00000390990 LY6G5BQ8NDX9 201 aa-0.31□□□□□ -2.46
RNU6-239P-201ENST00000390990 OR4K5Q8NGD3 323 aa-0.31□□□□□ -2.46
RNU6-239P-201ENST00000390990 OR51G2Q8NGK0 314 aa-0.31□□□□□ -2.46
RNU6-239P-201ENST00000390990 OR8U1Q8NH10 309 aa-0.31□□□□□ -2.46
RNU6-239P-201ENST00000390990 LILRB4Q8NHJ6 448 aa-0.31□□□□□ -2.46
RNU6-239P-201ENST00000390990 C15orf40Q8WUR7 153 aa-0.31□□□□□ -2.46
RNU6-239P-201ENST00000390990 N4BP2L2Q92802 583 aaPredicted RBP-0.31□□□□□ -2.46
RNU6-239P-201ENST00000390990 DUS3LQ96G46 650 aaKnown RBP-0.31□□□□□ -2.46
RNU6-239P-201ENST00000390990 PAGE5Q96GU1 130 aa-0.31□□□□□ -2.46
RNU6-239P-201ENST00000390990 ZBED3Q96IU2 234 aaPredicted RBP-0.31□□□□□ -2.46
RNU6-239P-201ENST00000390990 TSSK3Q96PN8 268 aa-0.31□□□□□ -2.46
RNU6-239P-201ENST00000390990 RIOK2Q9BVS4 552 aaKnown RBP-0.31□□□□□ -2.46
RNU6-239P-201ENST00000390990 SYNDIG1Q9H7V2 258 aa-0.31□□□□□ -2.46
RNU6-239P-201ENST00000390990 AKIRIN1Q9H9L7 192 aaPredicted RBP-0.31□□□□□ -2.46
RNU6-239P-201ENST00000390990 BCAP29Q9UHQ4 241 aa-0.31□□□□□ -2.46
RNU6-239P-201ENST00000390990 STAP1Q9ULZ2 295 aa-0.31□□□□□ -2.46
RNU6-239P-201ENST00000390990 R4GN34 69 aa-0.31□□□□□ -2.46
RNU6-239P-201ENST00000390990 CCDC7Q96M83 1385 aa-0.32□□□□□ -2.46
RNU6-239P-201ENST00000390990 THADAQ6YHU6 1953 aa-0.32□□□□□ -2.46
RNU6-239P-201ENST00000390990 NSG1A0A0A6YYJ2 146 aa-0.32□□□□□ -2.46
RNU6-239P-201ENST00000390990 CIB4A0PJX0 185 aa-0.32□□□□□ -2.46
RNU6-239P-201ENST00000390990 SMIM30A4D0T7 59 aa-0.32□□□□□ -2.46
RNU6-239P-201ENST00000390990 LRRC30A6NM36 301 aa-0.32□□□□□ -2.46
RNU6-239P-201ENST00000390990 BTNL10A8MVZ5 291 aa-0.32□□□□□ -2.46
RNU6-239P-201ENST00000390990 WASH3PC4AMC7 463 aa-0.32□□□□□ -2.46
RNU6-239P-201ENST00000390990 BPY2O14599 106 aa-0.32□□□□□ -2.46
RNU6-239P-201ENST00000390990 YIF1AO95070 293 aa-0.32□□□□□ -2.46
RNU6-239P-201ENST00000390990 GABARAPO95166 117 aa-0.32□□□□□ -2.46
RNU6-239P-201ENST00000390990 LCA5LO95447 670 aa-0.32□□□□□ -2.46
RNU6-239P-201ENST00000390990 INAFM2P0DMQ5 153 aa-0.32□□□□□ -2.46
RNU6-239P-201ENST00000390990 CBR1P16152 277 aa-0.32□□□□□ -2.46
RNU6-239P-201ENST00000390990 ZNF18P17022 549 aa-0.32□□□□□ -2.46
RNU6-239P-201ENST00000390990 CTNNB1P35222 781 aa-0.32□□□□□ -2.46
RNU6-239P-201ENST00000390990 SSTP61278 116 aa-0.32□□□□□ -2.46
RNU6-239P-201ENST00000390990 RPS14P62263 151 aaKnown RBP-0.32□□□□□ -2.46
RNU6-239P-201ENST00000390990 GINS1Q14691 196 aa-0.32□□□□□ -2.46
RNU6-239P-201ENST00000390990 PARP15Q460N3 678 aa-0.32□□□□□ -2.46
RNU6-239P-201ENST00000390990 AP1ARQ63HQ0 302 aa-0.32□□□□□ -2.46
RNU6-239P-201ENST00000390990 ACSM5Q6NUN0 579 aa-0.32□□□□□ -2.46
RNU6-239P-201ENST00000390990 PLBD1Q6P4A8 553 aa-0.32□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms