RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 GUCD1Q96NT3 240 aa13.54□□□□□ -0.24
PRNP-201ENST00000379440 PPIL3Q9H2H8 161 aaKnown RBP13.54□□□□□ -0.24
PRNP-201ENST00000379440 NRIP3Q9NQ35 241 aa13.54□□□□□ -0.24
PRNP-201ENST00000379440 TRIM36Q9NQ86 728 aa13.54□□□□□ -0.24
PRNP-201ENST00000379440 HAO2Q9NYQ3 351 aa13.54□□□□□ -0.24
PRNP-201ENST00000379440 TRAPPC4Q9Y296 219 aa13.54□□□□□ -0.24
PRNP-201ENST00000379440 GRIP1Q9Y3R0 1128 aa13.54□□□□□ -0.24
PRNP-201ENST00000379440 VPS13AQ96RL7 3174 aa13.54□□□□□ -0.24
PRNP-201ENST00000379440 CACNA1EQ15878 2313 aa13.54□□□□□ -0.24
PRNP-201ENST00000379440 OR6C68A6NDL8 312 aa13.54□□□□□ -0.24
PRNP-201ENST00000379440 TOR1AO14656 332 aa13.54□□□□□ -0.24
PRNP-201ENST00000379440 KHNYNO15037 678 aaKnown RBP13.54□□□□□ -0.24
PRNP-201ENST00000379440 WISP1O95388 367 aa13.54□□□□□ -0.24
PRNP-201ENST00000379440 IL12BP29460 328 aa13.54□□□□□ -0.24
PRNP-201ENST00000379440 CD83Q01151 205 aa13.54□□□□□ -0.24
PRNP-201ENST00000379440 BDH1Q02338 343 aa13.54□□□□□ -0.24
PRNP-201ENST00000379440 LTBQ06643 244 aa13.54□□□□□ -0.24
PRNP-201ENST00000379440 SLC3A1Q07837 685 aa13.54□□□□□ -0.24
PRNP-201ENST00000379440 SCRN3Q0VDG4 424 aa13.54□□□□□ -0.24
PRNP-201ENST00000379440 TOMM34Q15785 309 aaPredicted RBP13.54□□□□□ -0.24
PRNP-201ENST00000379440 ZFP69Q49AA0 526 aa13.54□□□□□ -0.24
PRNP-201ENST00000379440 ATAD3CQ5T2N8 411 aa13.54□□□□□ -0.24
PRNP-201ENST00000379440 TMEM71Q6P5X7 295 aa13.54□□□□□ -0.24
PRNP-201ENST00000379440 POMZP3Q6PJE2 187 aa13.54□□□□□ -0.24
PRNP-201ENST00000379440 FAM131AQ6UXB0 335 aa13.54□□□□□ -0.24
PRNP-201ENST00000379440 COX15Q7KZN9 410 aa13.54□□□□□ -0.24
PRNP-201ENST00000379440 KMT5CQ86Y97 462 aa13.54□□□□□ -0.24
PRNP-201ENST00000379440 NPEPL1Q8NDH3 523 aa13.54□□□□□ -0.24
PRNP-201ENST00000379440 C17orf47Q8NEP4 570 aa13.54□□□□□ -0.24
PRNP-201ENST00000379440 OR5J2Q8NH18 312 aa13.54□□□□□ -0.24
PRNP-201ENST00000379440 CCDC32Q9BV29 185 aa13.54□□□□□ -0.24
PRNP-201ENST00000379440 WWTR1Q9GZV5 400 aa13.54□□□□□ -0.24
PRNP-201ENST00000379440 INPP5EQ9NRR6 644 aa13.54□□□□□ -0.24
PRNP-201ENST00000379440 MRTO4Q9UKD2 239 aaKnown RBP13.54□□□□□ -0.24
PRNP-201ENST00000379440 HCRTR2O43614 444 aa13.53□□□□□ -0.24
PRNP-201ENST00000379440 TIAF1O95411 115 aa13.53□□□□□ -0.24
PRNP-201ENST00000379440 PDGFBP01127 241 aaPredicted RBP13.53□□□□□ -0.24
PRNP-201ENST00000379440 PNMTP11086 282 aa13.53□□□□□ -0.24
PRNP-201ENST00000379440 TACR3P29371 465 aa13.53□□□□□ -0.24
PRNP-201ENST00000379440 TALDO1P37837 337 aa13.53□□□□□ -0.24
PRNP-201ENST00000379440 GRK6P43250 576 aa13.53□□□□□ -0.24
PRNP-201ENST00000379440 RPS4XP62701 263 aaKnown RBP13.53□□□□□ -0.24
PRNP-201ENST00000379440 ZNF74Q16587 644 aa13.53□□□□□ -0.24
PRNP-201ENST00000379440 FAM27D1Q5T7N8 215 aa13.53□□□□□ -0.24
PRNP-201ENST00000379440 LYPD4Q6UWN0 246 aa13.53□□□□□ -0.24
PRNP-201ENST00000379440 SLC43A2Q8N370 569 aa13.53□□□□□ -0.24
PRNP-201ENST00000379440 OR1N1Q8NGS0 311 aa13.53□□□□□ -0.24
PRNP-201ENST00000379440 OR14A16Q8NHC5 309 aa13.53□□□□□ -0.24
PRNP-201ENST00000379440 SVIPQ8NHG7 77 aa13.53□□□□□ -0.24
PRNP-201ENST00000379440 MARC2Q969Z3 335 aa13.53□□□□□ -0.24
PRNP-201ENST00000379440 KTI12Q96EK9 354 aaPredicted RBP13.53□□□□□ -0.24
PRNP-201ENST00000379440 SLC19A3Q9BZV2 496 aa13.53□□□□□ -0.24
PRNP-201ENST00000379440 SRRQ9GZT4 340 aa13.53□□□□□ -0.24
PRNP-201ENST00000379440 GHITMQ9H3K2 345 aa13.53□□□□□ -0.24
PRNP-201ENST00000379440 EXOSC3Q9NQT5 275 aaKnown RBP13.53□□□□□ -0.24
PRNP-201ENST00000379440 KLHL21Q9UJP4 597 aa13.53□□□□□ -0.24
PRNP-201ENST00000379440 ZNF175Q9Y473 711 aa13.53□□□□□ -0.24
PRNP-201ENST00000379440 FAM171A2A8MVW0 826 aa13.53□□□□□ -0.24
PRNP-201ENST00000379440 TSPAN4O14817 238 aa13.53□□□□□ -0.24
PRNP-201ENST00000379440 EPHA8P29322 1005 aaPredicted RBP13.53□□□□□ -0.24
PRNP-201ENST00000379440 ACVR1BP36896 505 aa13.53□□□□□ -0.24
PRNP-201ENST00000379440 PLCXD2Q0VAA5 305 aa13.53□□□□□ -0.24
PRNP-201ENST00000379440 GPR50Q13585 617 aa13.53□□□□□ -0.24
PRNP-201ENST00000379440 GLYR1Q49A26 553 aaPredicted RBP13.53□□□□□ -0.24
PRNP-201ENST00000379440 TP53I3Q53FA7 332 aa13.53□□□□□ -0.24
PRNP-201ENST00000379440 DDI2Q5TDH0 399 aa13.53□□□□□ -0.24
PRNP-201ENST00000379440 C16orf47Q6ZP98 133 aaPredicted RBP13.53□□□□□ -0.24
PRNP-201ENST00000379440 OR6F1Q8NGZ6 308 aa13.53□□□□□ -0.24
PRNP-201ENST00000379440 Q96M85 177 aa13.53□□□□□ -0.24
PRNP-201ENST00000379440 DDOQ99489 341 aa13.53□□□□□ -0.24
PRNP-201ENST00000379440 NANSQ9NR45 359 aa13.53□□□□□ -0.24
PRNP-201ENST00000379440 SLC39A1Q9NY26 324 aa13.53□□□□□ -0.24
PRNP-201ENST00000379440 NPAP1Q9NZP6 1156 aa13.53□□□□□ -0.24
PRNP-201ENST00000379440 COPS7AQ9UBW8 275 aa13.53□□□□□ -0.24
PRNP-201ENST00000379440 TBC1D24Q9ULP9 559 aa13.53□□□□□ -0.24
PRNP-201ENST00000379440 MUC3AQ02505 3323 aa13.52□□□□□ -0.24
PRNP-201ENST00000379440 LY6G6EA0A0G2JKS1 128 aa13.52□□□□□ -0.24
PRNP-201ENST00000379440 A0A1W2PQM1 296 aa13.52□□□□□ -0.24
PRNP-201ENST00000379440 FABP12A6NFH5 140 aa13.52□□□□□ -0.24
PRNP-201ENST00000379440 TSPAN2O60636 221 aa13.52□□□□□ -0.24
PRNP-201ENST00000379440 NOS1APO75052 506 aaPredicted RBP13.52□□□□□ -0.24
PRNP-201ENST00000379440 RGS9O75916 674 aaPredicted RBP13.52□□□□□ -0.24
PRNP-201ENST00000379440 PTTG1O95997 202 aa13.52□□□□□ -0.24
PRNP-201ENST00000379440 ITPKBP27987 946 aa13.52□□□□□ -0.24
PRNP-201ENST00000379440 PYCR1P32322 319 aa13.52□□□□□ -0.24
PRNP-201ENST00000379440 DCAF7P61962 342 aa13.52□□□□□ -0.24
PRNP-201ENST00000379440 NR2C2APQ86WQ0 139 aa13.52□□□□□ -0.24
PRNP-201ENST00000379440 ATF6BQ99941 703 aa13.52□□□□□ -0.24
PRNP-201ENST00000379440 RNF32Q9H0A6 362 aa13.52□□□□□ -0.24
PRNP-201ENST00000379440 SYNDIG1Q9H7V2 258 aa13.52□□□□□ -0.24
PRNP-201ENST00000379440 MMP25Q9NPA2 562 aa13.52□□□□□ -0.24
PRNP-201ENST00000379440 U3KQA8 63 aa13.52□□□□□ -0.24
PRNP-201ENST00000379440 NUP210LQ5VU65 1888 aa13.52□□□□□ -0.24
PRNP-201ENST00000379440 PI4KAP42356 2102 aa13.52□□□□□ -0.24
PRNP-201ENST00000379440 ADAMTS20P59510 1910 aa13.52□□□□□ -0.24
PRNP-201ENST00000379440 A0A0G2JMP0 313 aa13.52□□□□□ -0.25
PRNP-201ENST00000379440 TEX13CA0A0J9YWL9 993 aa13.52□□□□□ -0.25
PRNP-201ENST00000379440 A0A1W2PPC1 479 aa13.52□□□□□ -0.25
PRNP-201ENST00000379440 SCO1O75880 301 aa13.52□□□□□ -0.25
PRNP-201ENST00000379440 F13BP05160 661 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms