RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 PGDP52209 483 aa16.6■□□□□ 0.25
TDP2-202ENST00000378198 PER3P56645 1201 aa16.6■□□□□ 0.25
TDP2-202ENST00000378198 MAT1AQ00266 395 aaKnown RBP16.6■□□□□ 0.25
TDP2-202ENST00000378198 SLC16A9Q7RTY1 509 aa16.6■□□□□ 0.25
TDP2-202ENST00000378198 TIGD4Q8IY51 512 aa16.6■□□□□ 0.25
TDP2-202ENST00000378198 ZDHHC1Q8WTX9 485 aa16.6■□□□□ 0.25
TDP2-202ENST00000378198 DACT3Q96B18 629 aaPredicted RBP16.6■□□□□ 0.25
TDP2-202ENST00000378198 CLEC1BQ9P126 229 aa16.6■□□□□ 0.25
TDP2-202ENST00000378198 PRODH2Q9UF12 536 aa16.6■□□□□ 0.25
TDP2-202ENST00000378198 ELF5Q9UKW6 265 aaPredicted RBP16.6■□□□□ 0.25
TDP2-202ENST00000378198 HIF3AQ9Y2N7 669 aa16.6■□□□□ 0.25
TDP2-202ENST00000378198 TRANK1O15050 2925 aa16.6■□□□□ 0.25
TDP2-202ENST00000378198 MPDZO75970 2070 aa16.6■□□□□ 0.25
TDP2-202ENST00000378198 IDSB3KWA1 339 aa16.6■□□□□ 0.25
TDP2-202ENST00000378198 ZFPL1O95159 310 aa16.6■□□□□ 0.25
TDP2-202ENST00000378198 IGHV4-34P06331 123 aa16.6■□□□□ 0.25
TDP2-202ENST00000378198 TPOP07202 933 aa16.6■□□□□ 0.25
TDP2-202ENST00000378198 ADRB1P08588 477 aa16.6■□□□□ 0.25
TDP2-202ENST00000378198 ADH7P40394 386 aa16.6■□□□□ 0.25
TDP2-202ENST00000378198 CDKN2AP42771 156 aaKnown RBP16.6■□□□□ 0.25
TDP2-202ENST00000378198 CCR9P51686 369 aa16.6■□□□□ 0.25
TDP2-202ENST00000378198 P2RX3P56373 397 aa16.6■□□□□ 0.25
TDP2-202ENST00000378198 AP3S2P59780 193 aa16.6■□□□□ 0.25
TDP2-202ENST00000378198 NANOS3P60323 173 aaKnown RBP16.6■□□□□ 0.25
TDP2-202ENST00000378198 RPL6Q02878 288 aaKnown RBP16.6■□□□□ 0.25
TDP2-202ENST00000378198 CAMK2BQ13554 666 aa16.6■□□□□ 0.25
TDP2-202ENST00000378198 SHHQ15465 462 aa16.6■□□□□ 0.25
TDP2-202ENST00000378198 ZNF615Q8N8J6 731 aa16.6■□□□□ 0.25
TDP2-202ENST00000378198 FAM71CQ8NEG0 241 aa16.6■□□□□ 0.25
TDP2-202ENST00000378198 OIT3Q8WWZ8 545 aa16.6■□□□□ 0.25
TDP2-202ENST00000378198 Q96M85 177 aa16.6■□□□□ 0.25
TDP2-202ENST00000378198 SLC25A18Q9H1K4 315 aa16.6■□□□□ 0.25
TDP2-202ENST00000378198 C20orf85Q9H1P6 137 aa16.6■□□□□ 0.25
TDP2-202ENST00000378198 KLHL9Q9P2J3 617 aa16.6■□□□□ 0.25
TDP2-202ENST00000378198 TP53BP1Q12888 1972 aaPredicted RBP16.59■□□□□ 0.25
TDP2-202ENST00000378198 BLOC1S5-TXNDC5H3BN57 136 aa16.59■□□□□ 0.25
TDP2-202ENST00000378198 PRAF2O60831 178 aa16.59■□□□□ 0.25
TDP2-202ENST00000378198 PEX14O75381 377 aa16.59■□□□□ 0.25
TDP2-202ENST00000378198 CD14P08571 375 aa16.59■□□□□ 0.25
TDP2-202ENST00000378198 CALCBP10092 127 aa16.59■□□□□ 0.25
TDP2-202ENST00000378198 HSD17B7P56937 341 aa16.59■□□□□ 0.25
TDP2-202ENST00000378198 C1orf61Q13536 156 aa16.59■□□□□ 0.25
TDP2-202ENST00000378198 FZD2Q14332 565 aa16.59■□□□□ 0.25
TDP2-202ENST00000378198 ZNF74Q16587 644 aa16.59■□□□□ 0.25
TDP2-202ENST00000378198 COL13A1Q5TAT6 717 aaPredicted RBP16.59■□□□□ 0.25
TDP2-202ENST00000378198 MTFR2Q6P444 385 aa16.59■□□□□ 0.25
TDP2-202ENST00000378198 TEX261Q6UWH6 196 aa16.59■□□□□ 0.25
TDP2-202ENST00000378198 FCRLAQ7L513 359 aa16.59■□□□□ 0.25
TDP2-202ENST00000378198 FAM220AQ7Z4H9 259 aa16.59■□□□□ 0.25
TDP2-202ENST00000378198 ATG4DQ86TL0 474 aaPredicted RBP16.59■□□□□ 0.25
TDP2-202ENST00000378198 FAM109AQ8N4B1 249 aa16.59■□□□□ 0.25
TDP2-202ENST00000378198 ZNF433Q8N7K0 673 aaPredicted RBP16.59■□□□□ 0.25
TDP2-202ENST00000378198 LRRC75AQ8NAA5 344 aa16.59■□□□□ 0.25
TDP2-202ENST00000378198 OR11H4Q8NGC9 324 aa16.59■□□□□ 0.25
TDP2-202ENST00000378198 ORAI1Q96D31 301 aa16.59■□□□□ 0.25
TDP2-202ENST00000378198 SLC25A38Q96DW6 304 aa16.59■□□□□ 0.25
TDP2-202ENST00000378198 SLITRK2Q9H156 845 aa16.59■□□□□ 0.25
TDP2-202ENST00000378198 HRASLSQ9HDD0 168 aa16.59■□□□□ 0.25
TDP2-202ENST00000378198 U3KQ87 197 aa16.59■□□□□ 0.25
TDP2-202ENST00000378198 A0A1B0GVT2 93 aa16.58■□□□□ 0.25
TDP2-202ENST00000378198 SSNA1O43805 119 aa16.58■□□□□ 0.25
TDP2-202ENST00000378198 KRT33AO76009 404 aa16.58■□□□□ 0.25
TDP2-202ENST00000378198 RAB40ALP0C0E4 278 aa16.58■□□□□ 0.25
TDP2-202ENST00000378198 THEGLP0DJG4 465 aa16.58■□□□□ 0.25
TDP2-202ENST00000378198 MAPK3P27361 379 aaPredicted RBP16.58■□□□□ 0.25
TDP2-202ENST00000378198 GRPRP30550 384 aa16.58■□□□□ 0.25
TDP2-202ENST00000378198 GALNSP34059 522 aa16.58■□□□□ 0.25
TDP2-202ENST00000378198 AQP2P41181 271 aa16.58■□□□□ 0.25
TDP2-202ENST00000378198 CCR5P51681 352 aa16.58■□□□□ 0.25
TDP2-202ENST00000378198 COL28A1Q2UY09 1125 aa16.58■□□□□ 0.25
TDP2-202ENST00000378198 KIAA0895LQ68EN5 471 aa16.58■□□□□ 0.25
TDP2-202ENST00000378198 FAM122BQ7Z309 247 aa16.58■□□□□ 0.25
TDP2-202ENST00000378198 FRMD1Q8N878 549 aa16.58■□□□□ 0.25
TDP2-202ENST00000378198 EXD3Q8N9H8 876 aa16.58■□□□□ 0.25
TDP2-202ENST00000378198 FCAMRQ8WWV6 532 aa16.58■□□□□ 0.25
TDP2-202ENST00000378198 RAB40AQ8WXH6 277 aa16.58■□□□□ 0.25
TDP2-202ENST00000378198 RGP1Q92546 391 aaPredicted RBP16.58■□□□□ 0.25
TDP2-202ENST00000378198 RNF166Q96A37 237 aaPredicted RBP16.58■□□□□ 0.25
TDP2-202ENST00000378198 S100A16Q96FQ6 103 aaKnown RBP16.58■□□□□ 0.25
TDP2-202ENST00000378198 TCTN2Q96GX1 697 aa16.58■□□□□ 0.25
TDP2-202ENST00000378198 GAS2L1Q99501 681 aaPredicted RBP16.58■□□□□ 0.25
TDP2-202ENST00000378198 PELOQ9BRX2 385 aaKnown RBP16.58■□□□□ 0.25
TDP2-202ENST00000378198 LIN7BQ9HAP6 207 aa16.58■□□□□ 0.25
TDP2-202ENST00000378198 NANSQ9NR45 359 aa16.58■□□□□ 0.25
TDP2-202ENST00000378198 SCP2D1Q9UJQ7 156 aa16.58■□□□□ 0.25
TDP2-202ENST00000378198 RCE1Q9Y256 329 aa16.58■□□□□ 0.25
TDP2-202ENST00000378198 PRR32B1ATL7 298 aa16.58■□□□□ 0.24
TDP2-202ENST00000378198 PSMD9O00233 223 aa16.58■□□□□ 0.24
TDP2-202ENST00000378198 KHNYNO15037 678 aaKnown RBP16.58■□□□□ 0.24
TDP2-202ENST00000378198 SERPINI2O75830 405 aa16.58■□□□□ 0.24
TDP2-202ENST00000378198 RAF1P04049 648 aa16.58■□□□□ 0.24
TDP2-202ENST00000378198 IFNA16P05015 189 aa16.58■□□□□ 0.24
TDP2-202ENST00000378198 MAOAP21397 527 aa16.58■□□□□ 0.24
TDP2-202ENST00000378198 SDHAP31040 664 aa16.58■□□□□ 0.24
TDP2-202ENST00000378198 MRPS10P82664 201 aaKnown RBP16.58■□□□□ 0.24
TDP2-202ENST00000378198 CAMK2DQ13557 499 aa16.58■□□□□ 0.24
TDP2-202ENST00000378198 ALKBH1Q13686 389 aaKnown RBP16.58■□□□□ 0.24
TDP2-202ENST00000378198 ELFN2Q5R3F8 820 aa16.58■□□□□ 0.24
TDP2-202ENST00000378198 FNDC7Q5VTL7 733 aa16.58■□□□□ 0.24
TDP2-202ENST00000378198 C10orf53Q8N6V4 93 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms