RNA–Protein interactions for RNA: ENST00000376634.8

VPS13A-204, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 10,269 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-204ENST00000376634 NRAPQ86VF7 1730 aa11.64□□□□□ -0.55
VPS13A-204ENST00000376634 SUSD5O60279 629 aa11.64□□□□□ -0.55
VPS13A-204ENST00000376634 LSAMPQ13449 338 aa11.64□□□□□ -0.55
VPS13A-204ENST00000376634 OR7G3Q8NG95 312 aa11.64□□□□□ -0.55
VPS13A-204ENST00000376634 BOCQ9BWV1 1114 aa11.64□□□□□ -0.55
VPS13A-204ENST00000376634 OR5K3A6NET4 321 aa11.64□□□□□ -0.55
VPS13A-204ENST00000376634 ETV1P50549 477 aa11.64□□□□□ -0.55
VPS13A-204ENST00000376634 FAM182AQ5T1J6 154 aa11.64□□□□□ -0.55
VPS13A-204ENST00000376634 FAM111BQ6SJ93 734 aa11.64□□□□□ -0.55
VPS13A-204ENST00000376634 SSX9Q7RTT3 188 aa11.64□□□□□ -0.55
VPS13A-204ENST00000376634 ADGRG3Q86Y34 549 aa11.64□□□□□ -0.55
VPS13A-204ENST00000376634 MRPL38Q96DV4 380 aaKnown RBP11.64□□□□□ -0.55
VPS13A-204ENST00000376634 PATZ1Q9HBE1 687 aaKnown RBP11.64□□□□□ -0.55
VPS13A-204ENST00000376634 AADACP22760 399 aa11.64□□□□□ -0.55
VPS13A-204ENST00000376634 EXOSC7Q15024 291 aaKnown RBP11.64□□□□□ -0.55
VPS13A-204ENST00000376634 KHDC1LQ5JSQ8 128 aa11.64□□□□□ -0.55
VPS13A-204ENST00000376634 SOHLH1Q5JUK2 328 aa11.64□□□□□ -0.55
VPS13A-204ENST00000376634 DCAF12Q5T6F0 453 aa11.64□□□□□ -0.55
VPS13A-204ENST00000376634 MOB1BQ7L9L4 216 aa11.64□□□□□ -0.55
VPS13A-204ENST00000376634 DPPA2Q7Z7J5 298 aa11.64□□□□□ -0.55
VPS13A-204ENST00000376634 RAB3CQ96E17 227 aa11.64□□□□□ -0.55
VPS13A-204ENST00000376634 SLC39A9Q9NUM3 307 aa11.64□□□□□ -0.55
VPS13A-204ENST00000376634 MEPCEQ7L2J0 689 aaKnown RBP11.63□□□□□ -0.55
VPS13A-204ENST00000376634 UTP23Q9BRU9 249 aaKnown RBP11.63□□□□□ -0.55
VPS13A-204ENST00000376634 CRYM-AS1A6NIL9 109 aa11.63□□□□□ -0.55
VPS13A-204ENST00000376634 METTL15A6NJ78 407 aa11.63□□□□□ -0.55
VPS13A-204ENST00000376634 E7ESA3 106 aa11.63□□□□□ -0.55
VPS13A-204ENST00000376634 GYPBP06028 91 aa11.63□□□□□ -0.55
VPS13A-204ENST00000376634 CPMP14384 443 aa11.63□□□□□ -0.55
VPS13A-204ENST00000376634 OPRD1P41143 372 aa11.63□□□□□ -0.55
VPS13A-204ENST00000376634 LPAL2Q16609 132 aa11.63□□□□□ -0.55
VPS13A-204ENST00000376634 FAM3CQ92520 227 aa11.63□□□□□ -0.55
VPS13A-204ENST00000376634 ISYNA1Q9NPH2 558 aa11.63□□□□□ -0.55
VPS13A-204ENST00000376634 SLAMF7Q9NQ25 335 aa11.63□□□□□ -0.55
VPS13A-204ENST00000376634 PTAFRP25105 342 aa11.63□□□□□ -0.55
VPS13A-204ENST00000376634 LGALS4P56470 323 aa11.63□□□□□ -0.55
VPS13A-204ENST00000376634 SLC14A2Q15849 920 aa11.63□□□□□ -0.55
VPS13A-204ENST00000376634 KDF1Q8NAX2 398 aaPredicted RBP11.63□□□□□ -0.55
VPS13A-204ENST00000376634 TMEM163Q8TC26 289 aa11.63□□□□□ -0.55
VPS13A-204ENST00000376634 ZDHHC11BP0C7U3 371 aa11.63□□□□□ -0.55
VPS13A-204ENST00000376634 SSR4P51571 173 aa11.63□□□□□ -0.55
VPS13A-204ENST00000376634 ZNF133P52736 654 aaPredicted RBP11.63□□□□□ -0.55
VPS13A-204ENST00000376634 TRA2BP62995 288 aaKnown RBP11.63□□□□□ -0.55
VPS13A-204ENST00000376634 ZNF425Q6IV72 752 aa11.63□□□□□ -0.55
VPS13A-204ENST00000376634 TMEM200AQ86VY9 491 aa11.63□□□□□ -0.55
VPS13A-204ENST00000376634 CNTN4Q8IWV2 1026 aa11.63□□□□□ -0.55
VPS13A-204ENST00000376634 SLC35F3Q8IY50 421 aa11.63□□□□□ -0.55
VPS13A-204ENST00000376634 SPARTQ8N0X7 666 aa11.63□□□□□ -0.55
VPS13A-204ENST00000376634 NPWQ8N729 165 aa11.63□□□□□ -0.55
VPS13A-204ENST00000376634 HPSE2Q8WWQ2 592 aa11.63□□□□□ -0.55
VPS13A-204ENST00000376634 ULBP2Q9BZM5 246 aa11.63□□□□□ -0.55
VPS13A-204ENST00000376634 METTL9Q9H1A3 318 aa11.63□□□□□ -0.55
VPS13A-204ENST00000376634 UBQLN4Q9NRR5 601 aa11.63□□□□□ -0.55
VPS13A-204ENST00000376634 ZNF623O75123 536 aa11.63□□□□□ -0.55
VPS13A-204ENST00000376634 SNNO75324 88 aaPredicted RBP11.63□□□□□ -0.55
VPS13A-204ENST00000376634 DFFBO76075 338 aa11.63□□□□□ -0.55
VPS13A-204ENST00000376634 PPT1P50897 306 aa11.63□□□□□ -0.55
VPS13A-204ENST00000376634 SYT13Q7L8C5 426 aa11.63□□□□□ -0.55
VPS13A-204ENST00000376634 OR8J2Q8NGG1 315 aa11.63□□□□□ -0.55
VPS13A-204ENST00000376634 UCN3Q969E3 161 aa11.63□□□□□ -0.55
VPS13A-204ENST00000376634 TCTN2Q96GX1 697 aa11.63□□□□□ -0.55
VPS13A-204ENST00000376634 VRTNQ9H8Y1 702 aa11.63□□□□□ -0.55
VPS13A-204ENST00000376634 RBBP6Q7Z6E9 1792 aaKnown RBP11.63□□□□□ -0.55
VPS13A-204ENST00000376634 LRP6O75581 1613 aa11.63□□□□□ -0.55
VPS13A-204ENST00000376634 OR7C1O76099 320 aaPredicted RBP11.63□□□□□ -0.55
VPS13A-204ENST00000376634 NXPH2O95156 264 aa11.63□□□□□ -0.55
VPS13A-204ENST00000376634 FECHP22830 423 aa11.63□□□□□ -0.55
VPS13A-204ENST00000376634 ECI1P42126 302 aa11.63□□□□□ -0.55
VPS13A-204ENST00000376634 IER5LQ5T953 404 aa11.63□□□□□ -0.55
VPS13A-204ENST00000376634 NEIL2Q969S2 332 aa11.63□□□□□ -0.55
VPS13A-204ENST00000376634 FOXN4Q96NZ1 517 aa11.63□□□□□ -0.55
VPS13A-204ENST00000376634 B3GAT1Q9P2W7 334 aa11.63□□□□□ -0.55
VPS13A-204ENST00000376634 CD207Q9UJ71 328 aa11.63□□□□□ -0.55
VPS13A-204ENST00000376634 RFXAPO00287 272 aa11.63□□□□□ -0.55
VPS13A-204ENST00000376634 HOXD13P35453 343 aa11.63□□□□□ -0.55
VPS13A-204ENST00000376634 KIR2DL3P43628 341 aa11.63□□□□□ -0.55
VPS13A-204ENST00000376634 OR1Q1Q15612 314 aa11.63□□□□□ -0.55
VPS13A-204ENST00000376634 SLC16A14Q7RTX9 510 aa11.63□□□□□ -0.55
VPS13A-204ENST00000376634 ZNRF4Q8WWF5 429 aa11.63□□□□□ -0.55
VPS13A-204ENST00000376634 ELOVL3Q9HB03 270 aa11.63□□□□□ -0.55
VPS13A-204ENST00000376634 CXXC1Q9P0U4 656 aaPredicted RBP11.63□□□□□ -0.55
VPS13A-204ENST00000376634 PPP1R2P9O14990 202 aa11.63□□□□□ -0.55
VPS13A-204ENST00000376634 CYTIPO60759 359 aa11.63□□□□□ -0.55
VPS13A-204ENST00000376634 DMWDQ09019 674 aa11.63□□□□□ -0.55
VPS13A-204ENST00000376634 COL9A2Q14055 689 aaPredicted RBP11.63□□□□□ -0.55
VPS13A-204ENST00000376634 HYAL4Q2M3T9 481 aa11.63□□□□□ -0.55
VPS13A-204ENST00000376634 LPCAT3Q6P1A2 487 aa11.63□□□□□ -0.55
VPS13A-204ENST00000376634 OR52R1Q8NGF1 315 aa11.63□□□□□ -0.55
VPS13A-204ENST00000376634 SDR39U1Q9NRG7 319 aaPredicted RBP11.63□□□□□ -0.55
VPS13A-204ENST00000376634 PISDQ9UG56 409 aa11.63□□□□□ -0.55
VPS13A-204ENST00000376634 NME4O00746 187 aa11.62□□□□□ -0.55
VPS13A-204ENST00000376634 PSMB3P49720 205 aa11.62□□□□□ -0.55
VPS13A-204ENST00000376634 GPRIN1Q7Z2K8 1008 aa11.62□□□□□ -0.55
VPS13A-204ENST00000376634 HSD17B8Q92506 261 aa11.62□□□□□ -0.55
VPS13A-204ENST00000376634 NIPAL2Q9H841 368 aa11.62□□□□□ -0.55
VPS13A-204ENST00000376634 PRSS38A1L453 326 aa11.62□□□□□ -0.55
VPS13A-204ENST00000376634 SLC16A7O60669 478 aa11.62□□□□□ -0.55
VPS13A-204ENST00000376634 TBPP20226 339 aa11.62□□□□□ -0.55
VPS13A-204ENST00000376634 ENTPD8Q5MY95 495 aa11.62□□□□□ -0.55
VPS13A-204ENST00000376634 NPSR1Q6W5P4 371 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms