RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 MRM1Q6IN84 353 aaKnown RBP6.17□□□□□ -1.42
UBR4-204ENST00000375254 PRRG4Q9BZD6 226 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 PLEK2Q9NYT0 353 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 GPR55Q9Y2T6 319 aaPredicted RBP6.17□□□□□ -1.42
UBR4-204ENST00000375254 PEG3Q9GZU2 1588 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 SLC25A4P12235 298 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 ITGB7P26010 798 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 CD96P40200 585 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 C9orf57Q5W0N0 161 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 OR2A2Q6IF42 318 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 MAMDC4Q6UXC1 1216 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 GPR137Q96N19 417 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 GABARAPL3Q9BY60 117 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 MAP1LC3B2A6NCE7 125 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 RPS12P25398 132 aaKnown RBP6.17□□□□□ -1.42
UBR4-204ENST00000375254 BCL6P41182 706 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 DAPP51397 102 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 KLF3P57682 345 aaPredicted RBP6.17□□□□□ -1.42
UBR4-204ENST00000375254 LGALSLQ3ZCW2 172 aaPredicted RBP6.17□□□□□ -1.42
UBR4-204ENST00000375254 TMEM37Q8WXS4 190 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 MAP1LC3BQ9GZQ8 125 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 PRO1933Q9H354 126 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 TIMM8BQ9Y5J9 83 aaPredicted RBP6.17□□□□□ -1.42
UBR4-204ENST00000375254 SUPT6HQ7KZ85 1726 aaKnown RBP6.17□□□□□ -1.42
UBR4-204ENST00000375254 NEMP2A6NFY4 417 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 AQP7P3A6NL99 342 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 GNG10P50151 68 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 SUB1P53999 127 aaKnown RBP eCLIP6.17□□□□□ -1.424e-7■■■□□ 16.5
UBR4-204ENST00000375254 INPP5JQ15735 1006 aaPredicted RBP6.17□□□□□ -1.42
UBR4-204ENST00000375254 GLDNQ6ZMI3 551 aaPredicted RBP6.17□□□□□ -1.42
UBR4-204ENST00000375254 SLC35E3Q7Z769 313 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 OR2L13Q8N349 312 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 RCBTB1Q8NDN9 531 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 NUDT10Q8NFP7 164 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 FAM3DQ96BQ1 224 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 SLC46A2Q9BY10 475 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 SYNPO2LQ9H987 977 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 TREX1Q9NSU2 369 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 ACAA1P09110 424 aaPredicted RBP6.17□□□□□ -1.42
UBR4-204ENST00000375254 SLC35E2BP0CK96 405 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 PTGFRP43088 359 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 STC1P52823 247 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 PMS2P11Q13670 270 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 IAH1Q2TAA2 248 aaPredicted RBP6.17□□□□□ -1.42
UBR4-204ENST00000375254 NXNL2Q5VZ03 156 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 LYSMD1Q96S90 227 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 RBM38Q9H0Z9 239 aaKnown RBP6.17□□□□□ -1.42
UBR4-204ENST00000375254 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.17□□□□□ -1.42
UBR4-204ENST00000375254 DLL4Q9NR61 685 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 KLK14Q9P0G3 267 aa6.17□□□□□ -1.42
UBR4-204ENST00000375254 HSPB2A8KAH6 182 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 GPR37L1O60883 481 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 TAS2R45P59539 299 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 SIX1Q15475 284 aaPredicted RBP6.16□□□□□ -1.42
UBR4-204ENST00000375254 HSPB2Q16082 182 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 NKPD1Q17RQ9 610 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 NADSYN1Q6IA69 706 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 CGB2Q6NT52 195 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 UBL7Q96S82 380 aaPredicted RBP6.16□□□□□ -1.42
UBR4-204ENST00000375254 EGLN3Q9H6Z9 239 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 ZNF430Q9H8G1 570 aaPredicted RBP6.16□□□□□ -1.42
UBR4-204ENST00000375254 LAMP3Q9UQV4 416 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 SNX11Q9Y5W9 270 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 NRXN1Q9ULB1 1477 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 EPHX1P07099 455 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 TCN2P20062 427 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 TSPAN31Q12999 210 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 EML3Q32P44 896 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 GLYATL3Q5SZD4 288 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 CLEC1AQ8NC01 280 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 ARRDC2Q8TBH0 407 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 GPR78Q96P69 363 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 C2orf42Q9NWW7 574 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 SLC35D3Q5M8T2 416 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 CATSPEREQ5SY80 951 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 PDLIM5Q96HC4 596 aaKnown RBP6.16□□□□□ -1.42
UBR4-204ENST00000375254 RPL10LQ96L21 214 aaKnown RBP6.16□□□□□ -1.42
UBR4-204ENST00000375254 PDCD2LQ9BRP1 358 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 HRASLSQ9HDD0 168 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 TMEM184BQ9Y519 407 aaPredicted RBP6.16□□□□□ -1.42
UBR4-204ENST00000375254 CLDN16Q9Y5I7 305 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 LOC102723971A0A1B0GUV8 181 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 SCAMP2O15127 329 aaKnown RBP6.16□□□□□ -1.42
UBR4-204ENST00000375254 PDE6DO43924 150 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 GASTP01350 101 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 SUCLG1P53597 346 aaKnown RBP6.16□□□□□ -1.42
UBR4-204ENST00000375254 ERVFC1-1P60608 527 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 Q499Y3 187 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 RNLSQ5VYX0 342 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 GPR135Q8IZ08 494 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 ASB11Q8WXH4 323 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 SPTSSAQ969W0 71 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 CRB1P82279 1406 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 CTDSPLO15194 276 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 COX5AP20674 150 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 SLC6A1P30531 599 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 OR2AK2Q8NG84 335 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 PPP1R1CQ8WVI7 109 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 BTG4Q9NY30 223 aa6.16□□□□□ -1.42
UBR4-204ENST00000375254 CBLCQ9ULV8 474 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms