RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 ZNF671Q8TAW3 534 aa11.17□□□□□ -0.62
UBR4-203ENST00000375225 DAZLQ92904 295 aaKnown RBP11.17□□□□□ -0.62
UBR4-203ENST00000375225 NMNAT2Q9BZQ4 307 aa11.17□□□□□ -0.62
UBR4-203ENST00000375225 LRRN3Q9H3W5 708 aa11.17□□□□□ -0.62
UBR4-203ENST00000375225 ZCCHC4Q9H5U6 513 aa11.17□□□□□ -0.62
UBR4-203ENST00000375225 FKRPQ9H9S5 495 aa11.17□□□□□ -0.62
UBR4-203ENST00000375225 B3GAT2Q9NPZ5 323 aa11.17□□□□□ -0.62
UBR4-203ENST00000375225 PNO1Q9NRX1 252 aaKnown RBP11.17□□□□□ -0.62
UBR4-203ENST00000375225 UCKL1Q9NWZ5 548 aa11.17□□□□□ -0.62
UBR4-203ENST00000375225 MRPL39Q9NYK5 338 aaKnown RBP11.17□□□□□ -0.62
UBR4-203ENST00000375225 NLKQ9UBE8 527 aa11.17□□□□□ -0.62
UBR4-203ENST00000375225 GRHPRQ9UBQ7 328 aa11.17□□□□□ -0.62
UBR4-203ENST00000375225 COPS7AQ9UBW8 275 aa11.17□□□□□ -0.62
UBR4-203ENST00000375225 NUFIP1Q9UHK0 495 aaKnown RBP11.17□□□□□ -0.62
UBR4-203ENST00000375225 SPATA2Q9UM82 520 aa11.17□□□□□ -0.62
UBR4-203ENST00000375225 CAMK2AQ9UQM7 478 aa11.17□□□□□ -0.62
UBR4-203ENST00000375225 DTX4Q9Y2E6 619 aa11.17□□□□□ -0.62
UBR4-203ENST00000375225 ZNF281Q9Y2X9 895 aa11.17□□□□□ -0.62
UBR4-203ENST00000375225 NUBP2Q9Y5Y2 271 aa11.17□□□□□ -0.62
UBR4-203ENST00000375225 ALG5Q9Y673 324 aa11.17□□□□□ -0.62
UBR4-203ENST00000375225 CACNG2Q9Y698 323 aa11.17□□□□□ -0.62
UBR4-203ENST00000375225 A0A1W2PQD3 144 aa11.16□□□□□ -0.62
UBR4-203ENST00000375225 OR6C76A6NM76 312 aa11.16□□□□□ -0.62
UBR4-203ENST00000375225 GNB5O14775 395 aa11.16□□□□□ -0.62
UBR4-203ENST00000375225 OR2B3O76000 313 aa11.16□□□□□ -0.62
UBR4-203ENST00000375225 TXNDC12O95881 172 aa11.16□□□□□ -0.62
UBR4-203ENST00000375225 ECDO95905 644 aaPredicted RBP11.16□□□□□ -0.62
UBR4-203ENST00000375225 EIF4EP06730 217 aaKnown RBP11.16□□□□□ -0.62
UBR4-203ENST00000375225 ALAS2P22557 587 aa11.16□□□□□ -0.62
UBR4-203ENST00000375225 THBS2P35442 1172 aa11.16□□□□□ -0.62
UBR4-203ENST00000375225 NAA10P41227 235 aaPredicted RBP11.16□□□□□ -0.62
UBR4-203ENST00000375225 BLVRAP53004 296 aa11.16□□□□□ -0.62
UBR4-203ENST00000375225 RRAS2P62070 204 aaPredicted RBP11.16□□□□□ -0.62
UBR4-203ENST00000375225 ERVK-25P63136 954 aa11.16□□□□□ -0.62
UBR4-203ENST00000375225 ERV3-1Q14264 604 aa11.16□□□□□ -0.62
UBR4-203ENST00000375225 NNATQ16517 81 aa11.16□□□□□ -0.62
UBR4-203ENST00000375225 SNAP47Q5SQN1 464 aa11.16□□□□□ -0.62
UBR4-203ENST00000375225 PEAR1Q5VY43 1037 aaPredicted RBP11.16□□□□□ -0.62
UBR4-203ENST00000375225 SLC22A10Q63ZE4 541 aa11.16□□□□□ -0.62
UBR4-203ENST00000375225 UNQ9370/PRO34162Q6UXP9 181 aa11.16□□□□□ -0.62
UBR4-203ENST00000375225 PLCZ1Q86YW0 608 aa11.16□□□□□ -0.62
UBR4-203ENST00000375225 GPR135Q8IZ08 494 aa11.16□□□□□ -0.62
UBR4-203ENST00000375225 TOMM5Q8N4H5 51 aa11.16□□□□□ -0.62
UBR4-203ENST00000375225 C17orf47Q8NEP4 570 aa11.16□□□□□ -0.62
UBR4-203ENST00000375225 DUSP23Q9BVJ7 150 aa11.16□□□□□ -0.62
UBR4-203ENST00000375225 ACTR6Q9GZN1 396 aa11.16□□□□□ -0.62
UBR4-203ENST00000375225 ABCG5Q9H222 651 aa11.16□□□□□ -0.62
UBR4-203ENST00000375225 BRD7Q9NPI1 651 aa11.16□□□□□ -0.62
UBR4-203ENST00000375225 ZNF275Q9NSD4 429 aaPredicted RBP11.16□□□□□ -0.62
UBR4-203ENST00000375225 A0A0G2JK05 382 aa11.15□□□□□ -0.62
UBR4-203ENST00000375225 BLOC1S5-TXNDC5H3BN57 136 aa11.15□□□□□ -0.62
UBR4-203ENST00000375225 HRKO00198 91 aa11.15□□□□□ -0.62
UBR4-203ENST00000375225 GSTZ1O43708 216 aaPredicted RBP11.15□□□□□ -0.62
UBR4-203ENST00000375225 DUX1O43812 170 aa11.15□□□□□ -0.62
UBR4-203ENST00000375225 CDC40O60508 579 aaKnown RBP eCLIP11.15□□□□□ -0.62
UBR4-203ENST00000375225 SLC25A12O75746 678 aa11.15□□□□□ -0.62
UBR4-203ENST00000375225 TPPPO94811 219 aa11.15□□□□□ -0.62
UBR4-203ENST00000375225 TFP02787 698 aa11.15□□□□□ -0.62
UBR4-203ENST00000375225 CFIP05156 583 aa11.15□□□□□ -0.62
UBR4-203ENST00000375225 EPXP11678 715 aa11.15□□□□□ -0.62
UBR4-203ENST00000375225 ARSBP15848 533 aa11.15□□□□□ -0.62
UBR4-203ENST00000375225 PGCP20142 388 aa11.15□□□□□ -0.62
UBR4-203ENST00000375225 EPHA8P29322 1005 aaPredicted RBP11.15□□□□□ -0.62
UBR4-203ENST00000375225 SLC6A1P30531 599 aa11.15□□□□□ -0.62
UBR4-203ENST00000375225 RAG2P55895 527 aa11.15□□□□□ -0.62
UBR4-203ENST00000375225 SLC37A1P57057 533 aa11.15□□□□□ -0.62
UBR4-203ENST00000375225 CTXN1P60606 82 aa11.15□□□□□ -0.62
UBR4-203ENST00000375225 HSD11B2P80365 405 aa11.15□□□□□ -0.62
UBR4-203ENST00000375225 MRPS10P82664 201 aaKnown RBP11.15□□□□□ -0.62
UBR4-203ENST00000375225 SKP2Q13309 424 aa11.15□□□□□ -0.62
UBR4-203ENST00000375225 COL9A2Q14055 689 aaPredicted RBP11.15□□□□□ -0.62
UBR4-203ENST00000375225 FNDC7Q5VTL7 733 aa11.15□□□□□ -0.62
UBR4-203ENST00000375225 C5orf46Q6UWT4 87 aa11.15□□□□□ -0.62
UBR4-203ENST00000375225 SLC29A4Q7RTT9 530 aa11.15□□□□□ -0.62
UBR4-203ENST00000375225 KMT5CQ86Y97 462 aa11.15□□□□□ -0.62
UBR4-203ENST00000375225 UBE2J2Q8N2K1 259 aa11.15□□□□□ -0.62
UBR4-203ENST00000375225 NMNAT3Q96T66 252 aa11.15□□□□□ -0.62
UBR4-203ENST00000375225 ALG12Q9BV10 488 aa11.15□□□□□ -0.62
UBR4-203ENST00000375225 GON7Q9BXV9 100 aa11.15□□□□□ -0.62
UBR4-203ENST00000375225 MARCH7Q9H992 704 aa11.15□□□□□ -0.62
UBR4-203ENST00000375225 RBMX2Q9Y388 322 aaKnown RBP11.15□□□□□ -0.62
UBR4-203ENST00000375225 COL6A3P12111 3177 aa11.15□□□□□ -0.63
UBR4-203ENST00000375225 TEX13CA0A0J9YWL9 993 aa11.14□□□□□ -0.63
UBR4-203ENST00000375225 NAP1L6A6NFF2 107 aa11.14□□□□□ -0.63
UBR4-203ENST00000375225 FAM47E-STBD1D6RA91 191 aa11.14□□□□□ -0.63
UBR4-203ENST00000375225 EEF1E1O43324 174 aaKnown RBP11.14□□□□□ -0.63
UBR4-203ENST00000375225 SULT1B1O43704 296 aa11.14□□□□□ -0.63
UBR4-203ENST00000375225 NUDT21O43809 227 aaKnown RBP11.14□□□□□ -0.63
UBR4-203ENST00000375225 ADAM11O75078 769 aa11.14□□□□□ -0.63
UBR4-203ENST00000375225 MT-ATP6P00846 226 aa11.14□□□□□ -0.63
UBR4-203ENST00000375225 C1QBP02746 253 aa11.14□□□□□ -0.63
UBR4-203ENST00000375225 CTSBP07858 339 aa11.14□□□□□ -0.63
UBR4-203ENST00000375225 FAM157BP0CG42 384 aa11.14□□□□□ -0.63
UBR4-203ENST00000375225 FBLP22087 321 aaKnown RBP11.14□□□□□ -0.63
UBR4-203ENST00000375225 CXCR1P25024 350 aa11.14□□□□□ -0.63
UBR4-203ENST00000375225 OR10A3P58181 314 aa11.14□□□□□ -0.63
UBR4-203ENST00000375225 CD83Q01151 205 aa11.14□□□□□ -0.63
UBR4-203ENST00000375225 EGR3Q06889 387 aa11.14□□□□□ -0.63
UBR4-203ENST00000375225 DYRK1AQ13627 763 aa11.14□□□□□ -0.63
UBR4-203ENST00000375225 EFR3AQ14156 821 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms