RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 EGFP01133 1207 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 STATHP02808 62 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 GUSBP08236 651 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 HBQ1P09105 142 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 HSMCR30P0CW71 290 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 C8orf89P0DMQ9 161 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 ALPPL2P10696 532 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 UGT2B7P16662 529 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 MYL12AP19105 171 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 TNNI3P19429 210 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 MAGP20916 626 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 RPS4Y1P22090 263 aaKnown RBP4.37□□□□□ -1.71
USP48-202ENST00000374730 CPN2P22792 545 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 PSMA1P25786 263 aaKnown RBP4.37□□□□□ -1.71
USP48-202ENST00000374730 AK4P27144 223 aaPredicted RBP4.37□□□□□ -1.71
USP48-202ENST00000374730 MAT2AP31153 395 aaKnown RBP4.37□□□□□ -1.71
USP48-202ENST00000374730 TLX1P31314 330 aaPredicted RBP4.37□□□□□ -1.71
USP48-202ENST00000374730 CCKARP32238 428 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 ACTR1BP42025 376 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 CRYBB2P43320 205 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 OMPP47874 163 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 PDX1P52945 283 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 CLDN2P57739 230 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 RGS8P57771 180 aaPredicted RBP4.37□□□□□ -1.71
USP48-202ENST00000374730 ACTR1AP61163 376 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 UBE2IP63279 158 aaKnown RBP4.37□□□□□ -1.71
USP48-202ENST00000374730 EEF1A1P68104 462 aaKnown RBP4.37□□□□□ -1.71
USP48-202ENST00000374730 BTN3A2P78410 334 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 BNC1Q01954 994 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 KRR1Q13601 381 aaKnown RBP4.37□□□□□ -1.71
USP48-202ENST00000374730 TPBGQ13641 420 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 ERV3-1Q14264 604 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 LTB4RQ15722 352 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 BAK1Q16611 211 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 ARHGAP11BQ3KRB8 267 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 EIPR1Q53HC9 387 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 SOWAHCQ53LP3 525 aaPredicted RBP4.37□□□□□ -1.71
USP48-202ENST00000374730 ZNF628Q5EBL2 1059 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 MANEAQ5SRI9 462 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 ATPAF1Q5TC12 328 aaPredicted RBP4.37□□□□□ -1.71
USP48-202ENST00000374730 FHL5Q5TD97 284 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 TYW3Q6IPR3 259 aaKnown RBP4.37□□□□□ -1.71
USP48-202ENST00000374730 ACSM5Q6NUN0 579 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 ZCCHC12Q6PEW1 402 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 ENPP7Q6UWV6 458 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 COLCA1Q6ZS62 124 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 PLEKHM3Q6ZWE6 761 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 MBOAT2Q6ZWT7 520 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 ABHD13Q7L211 337 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 OLIG3Q7RTU3 272 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 VRK2Q86Y07 508 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 SLC34A3Q8N130 599 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 IQCF1Q8N6M8 205 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 POGLUT1Q8NBL1 392 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 OR7G2Q8NG99 324 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 OR4E2Q8NGC2 313 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 OR4K14Q8NGD5 310 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 OR8D4Q8NGM9 314 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 OR52P1PQ8NH57 321 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 PIK3R3Q92569 461 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 AKAP1Q92667 903 aaKnown RBP eCLIP4.37□□□□□ -1.71
USP48-202ENST00000374730 OSTF1Q92882 214 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 LRRC46Q96FV0 321 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 OTUB1Q96FW1 271 aaPredicted RBP4.37□□□□□ -1.71
USP48-202ENST00000374730 LRR1Q96L50 414 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 BMFQ96LC9 184 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 NECTIN4Q96NY8 510 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 WDFY2Q96P53 400 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 SLC38A2Q96QD8 506 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 OR2A14Q96R47 310 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 STACQ99469 402 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 GPA33Q99795 319 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 CCDC32Q9BV29 185 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 TEX12Q9BXU0 123 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 PLA2G12AQ9BZM1 189 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 C6orf62Q9GZU0 229 aaPredicted RBP4.37□□□□□ -1.71
USP48-202ENST00000374730 ZNF350Q9GZX5 532 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 C8orf33Q9H7E9 229 aaPredicted RBP4.37□□□□□ -1.71
USP48-202ENST00000374730 EVA1AQ9H8M9 152 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 MTHFD2LQ9H903 347 aaPredicted RBP4.37□□□□□ -1.71
USP48-202ENST00000374730 CACYBPQ9HB71 228 aaKnown RBP4.37□□□□□ -1.71
USP48-202ENST00000374730 KRCC1Q9NPI7 259 aaPredicted RBP4.37□□□□□ -1.71
USP48-202ENST00000374730 G6PC2Q9NQR9 355 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 TVP23BQ9NYZ1 205 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 CLEC2DQ9UHP7 191 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 ZNF580Q9UK33 172 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 PILRAQ9UKJ1 303 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 DAPP1Q9UN19 280 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 C19orf53Q9UNZ5 99 aaPredicted RBP4.37□□□□□ -1.71
USP48-202ENST00000374730 TRAPPC4Q9Y296 219 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 ZNF443Q9Y2A4 671 aaPredicted RBP4.37□□□□□ -1.71
USP48-202ENST00000374730 EXOSC1Q9Y3B2 195 aaKnown RBP4.37□□□□□ -1.71
USP48-202ENST00000374730 SLC22A7Q9Y694 548 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 KCNE3Q9Y6H6 103 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 CDH10Q9Y6N8 788 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 SPACA6W5XKT8 324 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 COL5A1P20908 1838 aaPredicted RBP4.37□□□□□ -1.71
USP48-202ENST00000374730 BRWD1Q9NSI6 2320 aa4.37□□□□□ -1.71
USP48-202ENST00000374730 TP53BP1Q12888 1972 aaPredicted RBP4.36□□□□□ -1.71
USP48-202ENST00000374730 VCANP13611 3396 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms