RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 SLC22A10Q63ZE4 541 aa12.73□□□□□ -0.37
HMGCL-203ENST00000374490 GHDCQ8N2G8 530 aa12.73□□□□□ -0.37
HMGCL-203ENST00000374490 LRRC17Q8N6Y2 441 aa12.73□□□□□ -0.37
HMGCL-203ENST00000374490 ZNF615Q8N8J6 731 aa12.73□□□□□ -0.37
HMGCL-203ENST00000374490 SCMH1Q96GD3 660 aa12.73□□□□□ -0.37
HMGCL-203ENST00000374490 OR2M2Q96R28 347 aa12.73□□□□□ -0.37
HMGCL-203ENST00000374490 ABHD1Q96SE0 405 aa12.73□□□□□ -0.37
HMGCL-203ENST00000374490 MNTQ99583 582 aa12.73□□□□□ -0.37
HMGCL-203ENST00000374490 MED28Q9H204 178 aa12.73□□□□□ -0.37
HMGCL-203ENST00000374490 EMC7Q9NPA0 242 aa12.73□□□□□ -0.37
HMGCL-203ENST00000374490 PARD6AQ9NPB6 346 aa12.73□□□□□ -0.37
HMGCL-203ENST00000374490 BRD7Q9NPI1 651 aa12.73□□□□□ -0.37
HMGCL-203ENST00000374490 UBQLN4Q9NRR5 601 aa12.73□□□□□ -0.37
HMGCL-203ENST00000374490 EMC3Q9P0I2 261 aa12.73□□□□□ -0.37
HMGCL-203ENST00000374490 DTX4Q9Y2E6 619 aa12.73□□□□□ -0.37
HMGCL-203ENST00000374490 HIF3AQ9Y2N7 669 aa12.73□□□□□ -0.37
HMGCL-203ENST00000374490 MMACHCQ9Y4U1 282 aa12.73□□□□□ -0.37
HMGCL-203ENST00000374490 DCDC2BA2VCK2 349 aa12.73□□□□□ -0.37
HMGCL-203ENST00000374490 IFNA16P05015 189 aa12.73□□□□□ -0.37
HMGCL-203ENST00000374490 TACSTD2P09758 323 aa12.73□□□□□ -0.37
HMGCL-203ENST00000374490 UBL4AP11441 157 aa12.73□□□□□ -0.37
HMGCL-203ENST00000374490 ATF1P18846 271 aa12.73□□□□□ -0.37
HMGCL-203ENST00000374490 STOMP27105 288 aa12.73□□□□□ -0.37
HMGCL-203ENST00000374490 PGDP52209 483 aa12.73□□□□□ -0.37
HMGCL-203ENST00000374490 RPS11P62280 158 aaKnown RBP eCLIP12.73□□□□□ -0.37
HMGCL-203ENST00000374490 RACK1P63244 317 aaKnown RBP12.73□□□□□ -0.37
HMGCL-203ENST00000374490 C1orf61Q13536 156 aa12.73□□□□□ -0.37
HMGCL-203ENST00000374490 ELOCQ15369 112 aa12.73□□□□□ -0.37
HMGCL-203ENST00000374490 FNDC7Q5VTL7 733 aa12.73□□□□□ -0.37
HMGCL-203ENST00000374490 CD276Q5ZPR3 534 aa12.73□□□□□ -0.37
HMGCL-203ENST00000374490 SLC16A9Q7RTY1 509 aa12.73□□□□□ -0.37
HMGCL-203ENST00000374490 FAM220AQ7Z4H9 259 aa12.73□□□□□ -0.37
HMGCL-203ENST00000374490 GKN2Q86XP6 184 aa12.73□□□□□ -0.37
HMGCL-203ENST00000374490 SFTPA2Q8IWL1 248 aa12.73□□□□□ -0.37
HMGCL-203ENST00000374490 EID2Q8N6I1 236 aa12.73□□□□□ -0.37
HMGCL-203ENST00000374490 ZNF671Q8TAW3 534 aa12.73□□□□□ -0.37
HMGCL-203ENST00000374490 YIPF5Q969M3 257 aa12.73□□□□□ -0.37
HMGCL-203ENST00000374490 CNTNAP3BQ96NU0 1288 aa12.73□□□□□ -0.37
HMGCL-203ENST00000374490 NMNAT3Q96T66 252 aa12.73□□□□□ -0.37
HMGCL-203ENST00000374490 LRRC61Q9BV99 259 aa12.73□□□□□ -0.37
HMGCL-203ENST00000374490 CNTNAP3Q9BZ76 1288 aa12.73□□□□□ -0.37
HMGCL-203ENST00000374490 ACTR6Q9GZN1 396 aa12.73□□□□□ -0.37
HMGCL-203ENST00000374490 GALNT9Q9HCQ5 603 aa12.73□□□□□ -0.37
HMGCL-203ENST00000374490 PLSCR3Q9NRY6 295 aa12.73□□□□□ -0.37
HMGCL-203ENST00000374490 ZNF281Q9Y2X9 895 aa12.73□□□□□ -0.37
HMGCL-203ENST00000374490 CLDN16Q9Y5I7 305 aa12.73□□□□□ -0.37
HMGCL-203ENST00000374490 ZNF292O60281 2723 aa12.72□□□□□ -0.37
HMGCL-203ENST00000374490 ARPC4-TTLL3A0A0A6YYG9 625 aa12.72□□□□□ -0.37
HMGCL-203ENST00000374490 HSPB2A8KAH6 182 aa12.72□□□□□ -0.37
HMGCL-203ENST00000374490 HRKO00198 91 aa12.72□□□□□ -0.37
HMGCL-203ENST00000374490 GNB5O14775 395 aa12.72□□□□□ -0.37
HMGCL-203ENST00000374490 LANCL1O43813 399 aa12.72□□□□□ -0.37
HMGCL-203ENST00000374490 IL33O95760 270 aa12.72□□□□□ -0.37
HMGCL-203ENST00000374490 TXNDC12O95881 172 aa12.72□□□□□ -0.37
HMGCL-203ENST00000374490 CD14P08571 375 aa12.72□□□□□ -0.37
HMGCL-203ENST00000374490 SNRPBP14678 240 aaKnown RBP12.72□□□□□ -0.37
HMGCL-203ENST00000374490 HPGDP15428 266 aa12.72□□□□□ -0.37
HMGCL-203ENST00000374490 MAPK3P27361 379 aaPredicted RBP12.72□□□□□ -0.37
HMGCL-203ENST00000374490 BTCP35070 178 aa12.72□□□□□ -0.37
HMGCL-203ENST00000374490 SLC6A8P48029 635 aa12.72□□□□□ -0.37
HMGCL-203ENST00000374490 GABRA4P48169 554 aa12.72□□□□□ -0.37
HMGCL-203ENST00000374490 FNTBP49356 437 aa12.72□□□□□ -0.37
HMGCL-203ENST00000374490 BTG2P78543 158 aa12.72□□□□□ -0.37
HMGCL-203ENST00000374490 RIPPLY1Q0D2K3 151 aa12.72□□□□□ -0.37
HMGCL-203ENST00000374490 HSPB2Q16082 182 aa12.72□□□□□ -0.37
HMGCL-203ENST00000374490 SLC36A2Q495M3 483 aa12.72□□□□□ -0.37
HMGCL-203ENST00000374490 CEP78Q5JTW2 689 aa12.72□□□□□ -0.37
HMGCL-203ENST00000374490 CREB3L2Q70SY1 520 aa12.72□□□□□ -0.37
HMGCL-203ENST00000374490 MED25Q71SY5 747 aa12.72□□□□□ -0.37
HMGCL-203ENST00000374490 ZNF767PQ75MW2 155 aa12.72□□□□□ -0.37
HMGCL-203ENST00000374490 KRT74Q7RTS7 529 aa12.72□□□□□ -0.37
HMGCL-203ENST00000374490 ATG4DQ86TL0 474 aaPredicted RBP12.72□□□□□ -0.37
HMGCL-203ENST00000374490 ARL14Q8N4G2 192 aa12.72□□□□□ -0.37
HMGCL-203ENST00000374490 RFLNBQ8N5W9 214 aa12.72□□□□□ -0.37
HMGCL-203ENST00000374490 OR13C5Q8NGS8 318 aa12.72□□□□□ -0.37
HMGCL-203ENST00000374490 OR5H6Q8NGV6 325 aa12.72□□□□□ -0.37
HMGCL-203ENST00000374490 OR6K6Q8NGW6 343 aa12.72□□□□□ -0.37
HMGCL-203ENST00000374490 OR4C3Q8NH37 302 aa12.72□□□□□ -0.37
HMGCL-203ENST00000374490 C15orf40Q8WUR7 153 aa12.72□□□□□ -0.37
HMGCL-203ENST00000374490 ARSGQ96EG1 525 aa12.72□□□□□ -0.37
HMGCL-203ENST00000374490 MMABQ96EY8 250 aaPredicted RBP12.72□□□□□ -0.37
HMGCL-203ENST00000374490 GFM1Q96RP9 751 aaKnown RBP12.72□□□□□ -0.37
HMGCL-203ENST00000374490 MAP3K3Q99759 626 aa12.72□□□□□ -0.37
HMGCL-203ENST00000374490 PLEKHA1Q9HB21 404 aa12.72□□□□□ -0.37
HMGCL-203ENST00000374490 RXFP3Q9NSD7 469 aa12.72□□□□□ -0.37
HMGCL-203ENST00000374490 ADAM18Q9Y3Q7 739 aa12.72□□□□□ -0.37
HMGCL-203ENST00000374490 SLCO1B1Q9Y6L6 691 aa12.72□□□□□ -0.37
HMGCL-203ENST00000374490 CEP192Q8TEP8 1941 aa12.72□□□□□ -0.37
HMGCL-203ENST00000374490 IGKV1D-42A0A075B6H8 117 aa12.71□□□□□ -0.37
HMGCL-203ENST00000374490 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.71□□□□□ -0.37
HMGCL-203ENST00000374490 FITM1A5D6W6 292 aa12.71□□□□□ -0.37
HMGCL-203ENST00000374490 ANKRD34BA5PLL1 514 aa12.71□□□□□ -0.37
HMGCL-203ENST00000374490 SCDO00767 359 aa12.71□□□□□ -0.37
HMGCL-203ENST00000374490 SELENOFO60613 162 aa12.71□□□□□ -0.37
HMGCL-203ENST00000374490 TPPPO94811 219 aa12.71□□□□□ -0.37
HMGCL-203ENST00000374490 ZNF432O94892 652 aa12.71□□□□□ -0.37
HMGCL-203ENST00000374490 TCRBP04435 133 aa12.71□□□□□ -0.37
HMGCL-203ENST00000374490 CTSBP07858 339 aa12.71□□□□□ -0.37
HMGCL-203ENST00000374490 TFPIP10646 304 aa12.71□□□□□ -0.37
HMGCL-203ENST00000374490 PPICP45877 212 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms