RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 TMEM185BQ9H7F4 350 aa13.7□□□□□ -0.22
UBAP1-202ENST00000359544 CLEC4EQ9ULY5 219 aa13.7□□□□□ -0.22
UBAP1-202ENST00000359544 KCNE3Q9Y6H6 103 aa13.7□□□□□ -0.22
UBAP1-202ENST00000359544 TRAV14DV4A0A0A6YYC5 116 aa13.69□□□□□ -0.22
UBAP1-202ENST00000359544 OR6C68A6NDL8 312 aa13.69□□□□□ -0.22
UBAP1-202ENST00000359544 PAPLNO95428 1278 aa13.69□□□□□ -0.22
UBAP1-202ENST00000359544 ACAA1P09110 424 aaPredicted RBP13.69□□□□□ -0.22
UBAP1-202ENST00000359544 EDNRAP25101 427 aa13.69□□□□□ -0.22
UBAP1-202ENST00000359544 KCNJ3P48549 501 aa13.69□□□□□ -0.22
UBAP1-202ENST00000359544 LUMP51884 338 aaPredicted RBP13.69□□□□□ -0.22
UBAP1-202ENST00000359544 SNTB1Q13884 538 aaKnown RBP13.69□□□□□ -0.22
UBAP1-202ENST00000359544 GAS6Q14393 721 aa13.69□□□□□ -0.22
UBAP1-202ENST00000359544 GUCA2BQ16661 112 aa13.69□□□□□ -0.22
UBAP1-202ENST00000359544 PCGF3Q3KNV8 242 aa13.69□□□□□ -0.22
UBAP1-202ENST00000359544 FAM78AQ5JUQ0 283 aa13.69□□□□□ -0.22
UBAP1-202ENST00000359544 TANGO2Q6ICL3 276 aa13.69□□□□□ -0.22
UBAP1-202ENST00000359544 DNM1P46Q6ZS02 220 aa13.69□□□□□ -0.22
UBAP1-202ENST00000359544 FAM122BQ7Z309 247 aa13.69□□□□□ -0.22
UBAP1-202ENST00000359544 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.69□□□□□ -0.22
UBAP1-202ENST00000359544 ZNF433Q8N7K0 673 aaPredicted RBP13.69□□□□□ -0.22
UBAP1-202ENST00000359544 PEX11GQ96HA9 241 aa13.69□□□□□ -0.22
UBAP1-202ENST00000359544 MS4A4EQ96PG1 132 aa13.69□□□□□ -0.22
UBAP1-202ENST00000359544 ZNF629Q9UEG4 869 aaPredicted RBP13.69□□□□□ -0.22
UBAP1-202ENST00000359544 SLC25A13Q9UJS0 675 aa13.69□□□□□ -0.22
UBAP1-202ENST00000359544 PCDHB10Q9UN67 800 aa13.69□□□□□ -0.22
UBAP1-202ENST00000359544 CARHSP1Q9Y2V2 147 aaKnown RBP13.69□□□□□ -0.22
UBAP1-202ENST00000359544 UBE2MP61081 183 aaKnown RBP13.69□□□□□ -0.22
UBAP1-202ENST00000359544 C4orf46Q504U0 113 aa13.69□□□□□ -0.22
UBAP1-202ENST00000359544 JMJD6Q6NYC1 403 aaPredicted RBP13.69□□□□□ -0.22
UBAP1-202ENST00000359544 LRRTM4Q86VH4 590 aa13.69□□□□□ -0.22
UBAP1-202ENST00000359544 OR4C16Q8NGL9 310 aa13.69□□□□□ -0.22
UBAP1-202ENST00000359544 OR4C6Q8NH72 309 aa13.69□□□□□ -0.22
UBAP1-202ENST00000359544 ELP5Q8TE02 316 aa13.69□□□□□ -0.22
UBAP1-202ENST00000359544 CCDC107Q8WV48 283 aa13.69□□□□□ -0.22
UBAP1-202ENST00000359544 ZG16BQ96DA0 208 aa13.69□□□□□ -0.22
UBAP1-202ENST00000359544 RSPRY1Q96DX4 576 aa13.69□□□□□ -0.22
UBAP1-202ENST00000359544 MRPL48Q96GC5 212 aaKnown RBP13.69□□□□□ -0.22
UBAP1-202ENST00000359544 C16orf58Q96GQ5 468 aa13.69□□□□□ -0.22
UBAP1-202ENST00000359544 SLC22A12Q96S37 553 aa13.69□□□□□ -0.22
UBAP1-202ENST00000359544 GFI1Q99684 422 aa13.69□□□□□ -0.22
UBAP1-202ENST00000359544 PTDSS2Q9BVG9 487 aa13.69□□□□□ -0.22
UBAP1-202ENST00000359544 PITHD1Q9GZP4 211 aaPredicted RBP13.69□□□□□ -0.22
UBAP1-202ENST00000359544 APMAPQ9HDC9 416 aa13.69□□□□□ -0.22
UBAP1-202ENST00000359544 ANKRD10Q9NXR5 420 aa13.69□□□□□ -0.22
UBAP1-202ENST00000359544 TMEM272A0A1B0GTI8 110 aa13.68□□□□□ -0.22
UBAP1-202ENST00000359544 H7BY64 318 aa13.68□□□□□ -0.22
UBAP1-202ENST00000359544 CTNSO60931 367 aa13.68□□□□□ -0.22
UBAP1-202ENST00000359544 S100A6P06703 90 aa13.68□□□□□ -0.22
UBAP1-202ENST00000359544 HEXAP06865 529 aa13.68□□□□□ -0.22
UBAP1-202ENST00000359544 ZNF806P0C7X5 589 aa13.68□□□□□ -0.22
UBAP1-202ENST00000359544 C10orf91Q5T1B1 145 aa13.68□□□□□ -0.22
UBAP1-202ENST00000359544 CDK20Q8IZL9 346 aa13.68□□□□□ -0.22
UBAP1-202ENST00000359544 CHST14Q8NCH0 376 aa13.68□□□□□ -0.22
UBAP1-202ENST00000359544 EDAQ92838 391 aa13.68□□□□□ -0.22
UBAP1-202ENST00000359544 FAM117AQ9C073 453 aa13.68□□□□□ -0.22
UBAP1-202ENST00000359544 GSN-AS1Q9NRJ2 163 aa13.68□□□□□ -0.22
UBAP1-202ENST00000359544 POT1Q9NUX5 634 aa13.68□□□□□ -0.22
UBAP1-202ENST00000359544 OR5V1Q9UGF6 321 aa13.68□□□□□ -0.22
UBAP1-202ENST00000359544 TINAGQ9UJW2 476 aa13.68□□□□□ -0.22
UBAP1-202ENST00000359544 ZNF223Q9UK11 482 aaPredicted RBP13.68□□□□□ -0.22
UBAP1-202ENST00000359544 TMEM82A0PJX8 343 aa13.68□□□□□ -0.22
UBAP1-202ENST00000359544 NUDT19A8MXV4 375 aa13.68□□□□□ -0.22
UBAP1-202ENST00000359544 H7C417 338 aa13.68□□□□□ -0.22
UBAP1-202ENST00000359544 IMPA2O14732 288 aa13.68□□□□□ -0.22
UBAP1-202ENST00000359544 EMC8O43402 210 aa13.68□□□□□ -0.22
UBAP1-202ENST00000359544 CRYBA1P05813 215 aa13.68□□□□□ -0.22
UBAP1-202ENST00000359544 OR2T7P0C7T2 308 aa13.68□□□□□ -0.22
UBAP1-202ENST00000359544 ACADLP28330 430 aa13.68□□□□□ -0.22
UBAP1-202ENST00000359544 BLOC1S1P78537 153 aa13.68□□□□□ -0.22
UBAP1-202ENST00000359544 GLT8D1Q68CQ7 371 aa13.68□□□□□ -0.22
UBAP1-202ENST00000359544 OR4C11Q6IEV9 310 aa13.68□□□□□ -0.22
UBAP1-202ENST00000359544 C3orf33Q6P1S2 294 aa13.68□□□□□ -0.22
UBAP1-202ENST00000359544 RANBP3LQ86VV4 465 aaPredicted RBP13.68□□□□□ -0.22
UBAP1-202ENST00000359544 BEST3Q8N1M1 668 aa13.68□□□□□ -0.22
UBAP1-202ENST00000359544 OR1S2Q8NGQ3 325 aa13.68□□□□□ -0.22
UBAP1-202ENST00000359544 OR2T27Q8NH04 317 aa13.68□□□□□ -0.22
UBAP1-202ENST00000359544 C2CD4CQ8TF44 421 aa13.68□□□□□ -0.22
UBAP1-202ENST00000359544 CRB3Q9BUF7 120 aa13.68□□□□□ -0.22
UBAP1-202ENST00000359544 ZNF471Q9BX82 626 aaPredicted RBP13.68□□□□□ -0.22
UBAP1-202ENST00000359544 SLC46A2Q9BY10 475 aa13.68□□□□□ -0.22
UBAP1-202ENST00000359544 ALX4Q9H161 411 aaPredicted RBP13.68□□□□□ -0.22
UBAP1-202ENST00000359544 SLC25A18Q9H1K4 315 aa13.68□□□□□ -0.22
UBAP1-202ENST00000359544 C14orf105Q9NVL8 296 aa13.68□□□□□ -0.22
UBAP1-202ENST00000359544 MTFP1Q9UDX5 166 aa13.68□□□□□ -0.22
UBAP1-202ENST00000359544 MAFFQ9ULX9 164 aa13.68□□□□□ -0.22
UBAP1-202ENST00000359544 ZNF443Q9Y2A4 671 aaPredicted RBP13.68□□□□□ -0.22
UBAP1-202ENST00000359544 COL4A3Q01955 1670 aa13.68□□□□□ -0.22
UBAP1-202ENST00000359544 A0A0A6YYD5 115 aa13.67□□□□□ -0.22
UBAP1-202ENST00000359544 MAN2B1O00754 1011 aa13.67□□□□□ -0.22
UBAP1-202ENST00000359544 GATCO43716 136 aaKnown RBP13.67□□□□□ -0.22
UBAP1-202ENST00000359544 ERAL1O75616 437 aaKnown RBP13.67□□□□□ -0.22
UBAP1-202ENST00000359544 GLSO94925 669 aaPredicted RBP13.67□□□□□ -0.22
UBAP1-202ENST00000359544 CD8AP01732 235 aa13.67□□□□□ -0.22
UBAP1-202ENST00000359544 PTHLHP12272 177 aa13.67□□□□□ -0.22
UBAP1-202ENST00000359544 MAKP20794 623 aa13.67□□□□□ -0.22
UBAP1-202ENST00000359544 PTNP21246 168 aa13.67□□□□□ -0.22
UBAP1-202ENST00000359544 BDKRB2P30411 391 aa13.67□□□□□ -0.22
UBAP1-202ENST00000359544 SSR2P43308 183 aa13.67□□□□□ -0.22
UBAP1-202ENST00000359544 RAB5BP61020 215 aa13.67□□□□□ -0.22
UBAP1-202ENST00000359544 CRMP1Q14194 572 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms