RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 DHCR7Q9UBM7 475 aaKnown RBP11.3□□□□□ -0.6
COL20A1-201ENST00000358894 V9GY05 133 aa11.3□□□□□ -0.6
COL20A1-201ENST00000358894 TSC2P49815 1807 aa11.3□□□□□ -0.6
COL20A1-201ENST00000358894 DCDC2BA2VCK2 349 aa11.3□□□□□ -0.6
COL20A1-201ENST00000358894 SERINC4A6NH21 518 aa11.3□□□□□ -0.6
COL20A1-201ENST00000358894 P2RX6O15547 441 aa11.3□□□□□ -0.6
COL20A1-201ENST00000358894 SELENOFO60613 162 aa11.3□□□□□ -0.6
COL20A1-201ENST00000358894 TBX19O60806 448 aa11.3□□□□□ -0.6
COL20A1-201ENST00000358894 SEMG1P04279 462 aa11.3□□□□□ -0.6
COL20A1-201ENST00000358894 RAB3AP20336 220 aa11.3□□□□□ -0.6
COL20A1-201ENST00000358894 ETV6P41212 452 aa11.3□□□□□ -0.6
COL20A1-201ENST00000358894 CCR6P51684 374 aa11.3□□□□□ -0.6
COL20A1-201ENST00000358894 DUSP2Q05923 314 aa11.3□□□□□ -0.6
COL20A1-201ENST00000358894 TCTE1Q5JU00 501 aa11.3□□□□□ -0.6
COL20A1-201ENST00000358894 DNM1P34Q6PK57 102 aa11.3□□□□□ -0.6
COL20A1-201ENST00000358894 SLC35D2Q76EJ3 337 aa11.3□□□□□ -0.6
COL20A1-201ENST00000358894 KANSL1Q7Z3B3 1105 aa11.3□□□□□ -0.6
COL20A1-201ENST00000358894 OR51Q1Q8NH59 317 aa11.3□□□□□ -0.6
COL20A1-201ENST00000358894 SYNPRQ8TBG9 265 aa11.3□□□□□ -0.6
COL20A1-201ENST00000358894 ORAI1Q96D31 301 aa11.3□□□□□ -0.6
COL20A1-201ENST00000358894 ACTR6Q9GZN1 396 aa11.3□□□□□ -0.6
COL20A1-201ENST00000358894 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.3□□□□□ -0.6
COL20A1-201ENST00000358894 NOX4Q9NPH5 578 aa11.3□□□□□ -0.6
COL20A1-201ENST00000358894 CMC2Q9NRP2 79 aa11.3□□□□□ -0.6
COL20A1-201ENST00000358894 MYLKQ15746 1914 aa11.29□□□□□ -0.6
COL20A1-201ENST00000358894 A0A1W2PPL8 197 aa11.29□□□□□ -0.6
COL20A1-201ENST00000358894 ANKRD61A6NGH8 418 aa11.29□□□□□ -0.6
COL20A1-201ENST00000358894 PLRG1O43660 514 aaKnown RBP11.29□□□□□ -0.6
COL20A1-201ENST00000358894 CREBL2O60519 120 aaPredicted RBP11.29□□□□□ -0.6
COL20A1-201ENST00000358894 THBS1P07996 1170 aa11.29□□□□□ -0.6
COL20A1-201ENST00000358894 ZNF20P17024 532 aa11.29□□□□□ -0.6
COL20A1-201ENST00000358894 SLC6A9P48067 706 aa11.29□□□□□ -0.6
COL20A1-201ENST00000358894 ARFRP1Q13795 201 aa11.29□□□□□ -0.6
COL20A1-201ENST00000358894 MLC1Q15049 377 aa11.29□□□□□ -0.6
COL20A1-201ENST00000358894 FBXO42Q6P3S6 717 aa11.29□□□□□ -0.6
COL20A1-201ENST00000358894 VN1R4Q7Z5H5 301 aa11.29□□□□□ -0.6
COL20A1-201ENST00000358894 ZSCAN1Q8NBB4 408 aa11.29□□□□□ -0.6
COL20A1-201ENST00000358894 ZNF436Q9C0F3 470 aaPredicted RBP11.29□□□□□ -0.6
COL20A1-201ENST00000358894 METTL7AQ9H8H3 244 aa11.29□□□□□ -0.6
COL20A1-201ENST00000358894 UBQLN4Q9NRR5 601 aa11.29□□□□□ -0.6
COL20A1-201ENST00000358894 IL20Q9NYY1 176 aa11.29□□□□□ -0.6
COL20A1-201ENST00000358894 LRIT1Q9P2V4 623 aa11.29□□□□□ -0.6
COL20A1-201ENST00000358894 CDC42EP2O14613 210 aa11.29□□□□□ -0.6
COL20A1-201ENST00000358894 OR2T7P0C7T2 308 aa11.29□□□□□ -0.6
COL20A1-201ENST00000358894 HIST1H1CP16403 213 aaKnown RBP11.29□□□□□ -0.6
COL20A1-201ENST00000358894 HSD11B1P28845 292 aa11.29□□□□□ -0.6
COL20A1-201ENST00000358894 PTH2RP49190 550 aa11.29□□□□□ -0.6
COL20A1-201ENST00000358894 DHPSP49366 369 aaPredicted RBP11.29□□□□□ -0.6
COL20A1-201ENST00000358894 EVX1P49640 407 aa11.29□□□□□ -0.6
COL20A1-201ENST00000358894 PCGF3Q3KNV8 242 aa11.29□□□□□ -0.6
COL20A1-201ENST00000358894 GLT8D1Q68CQ7 371 aa11.29□□□□□ -0.6
COL20A1-201ENST00000358894 MED25Q71SY5 747 aa11.29□□□□□ -0.6
COL20A1-201ENST00000358894 MAMDC2Q7Z304 686 aaPredicted RBP11.29□□□□□ -0.6
COL20A1-201ENST00000358894 DPY19L4Q7Z388 723 aa11.29□□□□□ -0.6
COL20A1-201ENST00000358894 PEG10Q86TG7 708 aaKnown RBP11.29□□□□□ -0.6
COL20A1-201ENST00000358894 CRIPAKQ8N1N5 446 aa11.29□□□□□ -0.6
COL20A1-201ENST00000358894 OR4N2Q8NGD1 307 aa11.29□□□□□ -0.6
COL20A1-201ENST00000358894 OR2T27Q8NH04 317 aa11.29□□□□□ -0.6
COL20A1-201ENST00000358894 FBLIM1Q8WUP2 373 aa11.29□□□□□ -0.6
COL20A1-201ENST00000358894 GPN3Q9UHW5 284 aaPredicted RBP11.29□□□□□ -0.6
COL20A1-201ENST00000358894 PNMTP11086 282 aa11.29□□□□□ -0.6
COL20A1-201ENST00000358894 RBMS1P29558 406 aaKnown RBP11.29□□□□□ -0.6
COL20A1-201ENST00000358894 RPS27P42677 84 aaKnown RBP11.29□□□□□ -0.6
COL20A1-201ENST00000358894 KIR2DL3P43628 341 aa11.29□□□□□ -0.6
COL20A1-201ENST00000358894 BTG2P78543 158 aa11.29□□□□□ -0.6
COL20A1-201ENST00000358894 E2F1Q01094 437 aa11.29□□□□□ -0.6
COL20A1-201ENST00000358894 MAPK14Q16539 360 aa11.29□□□□□ -0.6
COL20A1-201ENST00000358894 SLC25A24Q6NUK1 477 aa11.29□□□□□ -0.6
COL20A1-201ENST00000358894 SIAH3Q8IW03 269 aa11.29□□□□□ -0.6
COL20A1-201ENST00000358894 KCTD12Q96CX2 325 aaKnown RBP11.29□□□□□ -0.6
COL20A1-201ENST00000358894 KLHL15Q96M94 604 aa11.29□□□□□ -0.6
COL20A1-201ENST00000358894 RBP7Q96R05 134 aa11.29□□□□□ -0.6
COL20A1-201ENST00000358894 VDAC3Q9Y277 283 aa11.29□□□□□ -0.6
COL20A1-201ENST00000358894 MRPS2Q9Y399 296 aaKnown RBP11.29□□□□□ -0.6
COL20A1-201ENST00000358894 NUBP2Q9Y5Y2 271 aa11.29□□□□□ -0.6
COL20A1-201ENST00000358894 H3BML4 177 aa11.28□□□□□ -0.6
COL20A1-201ENST00000358894 SIX6O95475 246 aa11.28□□□□□ -0.6
COL20A1-201ENST00000358894 C1QBP02746 253 aa11.28□□□□□ -0.6
COL20A1-201ENST00000358894 PRH1P02810 166 aa11.28□□□□□ -0.6
COL20A1-201ENST00000358894 SDHBP21912 280 aa11.28□□□□□ -0.6
COL20A1-201ENST00000358894 MRPS21P82921 87 aaKnown RBP11.28□□□□□ -0.6
COL20A1-201ENST00000358894 GPR176Q14439 515 aa11.28□□□□□ -0.6
COL20A1-201ENST00000358894 OTPQ5XKR4 325 aa11.28□□□□□ -0.6
COL20A1-201ENST00000358894 RPL22L1Q6P5R6 122 aaKnown RBP11.28□□□□□ -0.6
COL20A1-201ENST00000358894 KCTD9Q7L273 389 aa11.28□□□□□ -0.6
COL20A1-201ENST00000358894 KIAA1143Q96AT1 154 aaPredicted RBP11.28□□□□□ -0.6
COL20A1-201ENST00000358894 TSSK2Q96PF2 358 aa11.28□□□□□ -0.6
COL20A1-201ENST00000358894 BARHL1Q9BZE3 327 aa11.28□□□□□ -0.6
COL20A1-201ENST00000358894 TCEAL2Q9H3H9 227 aaPredicted RBP11.28□□□□□ -0.6
COL20A1-201ENST00000358894 LYRM4Q9HD34 91 aa11.28□□□□□ -0.6
COL20A1-201ENST00000358894 ACOXLQ9NUZ1 547 aa11.28□□□□□ -0.6
COL20A1-201ENST00000358894 SLC16A7O60669 478 aa11.28□□□□□ -0.6
COL20A1-201ENST00000358894 GALR3O60755 368 aaPredicted RBP11.28□□□□□ -0.6
COL20A1-201ENST00000358894 OPN1LWP04000 364 aa11.28□□□□□ -0.6
COL20A1-201ENST00000358894 S100A2P29034 98 aa11.28□□□□□ -0.6
COL20A1-201ENST00000358894 GDNFP39905 211 aa11.28□□□□□ -0.6
COL20A1-201ENST00000358894 FRKP42685 505 aaPredicted RBP11.28□□□□□ -0.6
COL20A1-201ENST00000358894 GPR85P60893 370 aa11.28□□□□□ -0.6
COL20A1-201ENST00000358894 HNRNPKP61978 463 aaKnown RBP eCLIP11.28□□□□□ -0.6
COL20A1-201ENST00000358894 ZP2Q05996 745 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms