RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 BCDIN3DQ7Z5W3 292 aaKnown RBP16.32■□□□□ 0.2
SMARCD3-202ENST00000356800 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.32■□□□□ 0.2
SMARCD3-202ENST00000356800 TMEM251Q8N6I4 163 aa16.32■□□□□ 0.2
SMARCD3-202ENST00000356800 ZFP62Q8NB50 900 aaPredicted RBP16.32■□□□□ 0.2
SMARCD3-202ENST00000356800 OR5J2Q8NH18 312 aa16.32■□□□□ 0.2
SMARCD3-202ENST00000356800 ZNF417Q8TAU3 575 aa16.32■□□□□ 0.2
SMARCD3-202ENST00000356800 HIST1H2ACQ93077 130 aa16.32■□□□□ 0.2
SMARCD3-202ENST00000356800 GPX7Q96SL4 187 aaPredicted RBP16.32■□□□□ 0.2
SMARCD3-202ENST00000356800 ZNF587Q96SQ5 575 aaPredicted RBP16.32■□□□□ 0.2
SMARCD3-202ENST00000356800 TUBA1CQ9BQE3 449 aa16.32■□□□□ 0.2
SMARCD3-202ENST00000356800 CCDC90BQ9GZT6 254 aa16.32■□□□□ 0.2
SMARCD3-202ENST00000356800 GPR52Q9Y2T5 361 aa16.32■□□□□ 0.2
SMARCD3-202ENST00000356800 RAXQ9Y2V3 346 aa16.32■□□□□ 0.2
SMARCD3-202ENST00000356800 ADAM18Q9Y3Q7 739 aa16.32■□□□□ 0.2
SMARCD3-202ENST00000356800 KIAA1549Q9HCM3 1950 aa16.32■□□□□ 0.2
SMARCD3-202ENST00000356800 IGF2RP11717 2491 aa16.32■□□□□ 0.2
SMARCD3-202ENST00000356800 CACNA1AO00555 2505 aa16.32■□□□□ 0.2
SMARCD3-202ENST00000356800 PRODHO43272 600 aa16.31■□□□□ 0.2
SMARCD3-202ENST00000356800 EMX1Q04741 257 aaPredicted RBP16.31■□□□□ 0.2
SMARCD3-202ENST00000356800 SGCBQ16585 318 aa16.31■□□□□ 0.2
SMARCD3-202ENST00000356800 HYAL4Q2M3T9 481 aa16.31■□□□□ 0.2
SMARCD3-202ENST00000356800 ZNF362Q5T0B9 420 aaPredicted RBP16.31■□□□□ 0.2
SMARCD3-202ENST00000356800 AADACL4Q5VUY2 407 aa16.31■□□□□ 0.2
SMARCD3-202ENST00000356800 FOXB2Q5VYV0 432 aa16.31■□□□□ 0.2
SMARCD3-202ENST00000356800 BORAQ6PGQ7 559 aa16.31■□□□□ 0.2
SMARCD3-202ENST00000356800 SVOPQ8N4V2 548 aa16.31■□□□□ 0.2
SMARCD3-202ENST00000356800 TMEM178AQ8NBL3 297 aa16.31■□□□□ 0.2
SMARCD3-202ENST00000356800 ANKK1Q8NFD2 765 aa16.31■□□□□ 0.2
SMARCD3-202ENST00000356800 OR5B2Q96R09 309 aa16.31■□□□□ 0.2
SMARCD3-202ENST00000356800 NRIP3Q9NQ35 241 aa16.31■□□□□ 0.2
SMARCD3-202ENST00000356800 MRPL39Q9NYK5 338 aaKnown RBP16.31■□□□□ 0.2
SMARCD3-202ENST00000356800 PLPP3O14495 311 aa16.3■□□□□ 0.2
SMARCD3-202ENST00000356800 F13BP05160 661 aa16.3■□□□□ 0.2
SMARCD3-202ENST00000356800 HPNP05981 417 aa16.3■□□□□ 0.2
SMARCD3-202ENST00000356800 FKBP2P26885 142 aaKnown RBP16.3■□□□□ 0.2
SMARCD3-202ENST00000356800 TTKP33981 857 aa16.3■□□□□ 0.2
SMARCD3-202ENST00000356800 RPL4P36578 427 aaKnown RBP16.3■□□□□ 0.2
SMARCD3-202ENST00000356800 MAGEA5P43359 124 aa16.3■□□□□ 0.2
SMARCD3-202ENST00000356800 CLK1P49759 484 aaKnown RBP16.3■□□□□ 0.2
SMARCD3-202ENST00000356800 PLGLB1Q02325 96 aa16.3■□□□□ 0.2
SMARCD3-202ENST00000356800 MVKQ03426 396 aa16.3■□□□□ 0.2
SMARCD3-202ENST00000356800 ST3GAL4Q11206 333 aa16.3■□□□□ 0.2
SMARCD3-202ENST00000356800 NEDD8Q15843 81 aa16.3■□□□□ 0.2
SMARCD3-202ENST00000356800 ALG10Q5BKT4 473 aa16.3■□□□□ 0.2
SMARCD3-202ENST00000356800 ARHGAP11AQ6P4F7 1023 aa16.3■□□□□ 0.2
SMARCD3-202ENST00000356800 ERMAPQ96PL5 475 aaPredicted RBP16.3■□□□□ 0.2
SMARCD3-202ENST00000356800 KATNB1Q9BVA0 655 aa16.3■□□□□ 0.2
SMARCD3-202ENST00000356800 ASPNQ9BXN1 380 aa16.3■□□□□ 0.2
SMARCD3-202ENST00000356800 B4GALT7Q9UBV7 327 aa16.3■□□□□ 0.2
SMARCD3-202ENST00000356800 PCDHGA9Q9Y5G4 932 aaKnown RBP16.3■□□□□ 0.2
SMARCD3-202ENST00000356800 IER3IP1Q9Y5U9 82 aa16.3■□□□□ 0.2
SMARCD3-202ENST00000356800 NCOR2Q9Y618 2525 aa16.3■□□□□ 0.2
SMARCD3-202ENST00000356800 ARPC3O15145 178 aa16.3■□□□□ 0.2
SMARCD3-202ENST00000356800 IDH3BO43837 385 aa16.3■□□□□ 0.2
SMARCD3-202ENST00000356800 MT-ND2P03891 347 aa16.3■□□□□ 0.2
SMARCD3-202ENST00000356800 PDGFAP04085 211 aa16.3■□□□□ 0.2
SMARCD3-202ENST00000356800 DBTP11182 482 aaKnown RBP16.3■□□□□ 0.2
SMARCD3-202ENST00000356800 C21orf33P30042 268 aaPredicted RBP16.3■□□□□ 0.2
SMARCD3-202ENST00000356800 GFRA1P56159 465 aa16.3■□□□□ 0.2
SMARCD3-202ENST00000356800 RAC1P63000 192 aa16.3■□□□□ 0.2
SMARCD3-202ENST00000356800 ERVK-25P63136 954 aa16.3■□□□□ 0.2
SMARCD3-202ENST00000356800 ZNF91Q05481 1191 aa16.3■□□□□ 0.2
SMARCD3-202ENST00000356800 PMS2P3Q13401 168 aa16.3■□□□□ 0.2
SMARCD3-202ENST00000356800 MFSD13AQ14CX5 517 aa16.3■□□□□ 0.2
SMARCD3-202ENST00000356800 RNFT1Q5M7Z0 435 aa16.3■□□□□ 0.2
SMARCD3-202ENST00000356800 NXNL2Q5VZ03 156 aa16.3■□□□□ 0.2
SMARCD3-202ENST00000356800 GTF2IRD2BQ6EKJ0 949 aa16.3■□□□□ 0.2
SMARCD3-202ENST00000356800 IGFL3Q6UXB1 125 aa16.3■□□□□ 0.2
SMARCD3-202ENST00000356800 FAM122BQ7Z309 247 aa16.3■□□□□ 0.2
SMARCD3-202ENST00000356800 GTF2IRD2Q86UP8 949 aa16.3■□□□□ 0.2
SMARCD3-202ENST00000356800 STX19Q8N4C7 294 aa16.3■□□□□ 0.2
SMARCD3-202ENST00000356800 RFKQ969G6 155 aa16.3■□□□□ 0.2
SMARCD3-202ENST00000356800 TMIGD2Q96BF3 282 aa16.3■□□□□ 0.2
SMARCD3-202ENST00000356800 SFXN2Q96NB2 322 aa16.3■□□□□ 0.2
SMARCD3-202ENST00000356800 RBM38Q9H0Z9 239 aaKnown RBP16.3■□□□□ 0.2
SMARCD3-202ENST00000356800 MRPS18AQ9NVS2 196 aaKnown RBP16.3■□□□□ 0.2
SMARCD3-202ENST00000356800 ALKBH4Q9NXW9 302 aa16.3■□□□□ 0.2
SMARCD3-202ENST00000356800 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.3■□□□□ 0.2
SMARCD3-202ENST00000356800 HDGFL3Q9Y3E1 203 aa16.3■□□□□ 0.2
SMARCD3-202ENST00000356800 CORINQ9Y5Q5 1042 aa16.3■□□□□ 0.2
SMARCD3-202ENST00000356800 PTPRQQ9UMZ3 2332 aa16.3■□□□□ 0.2
SMARCD3-202ENST00000356800 ZNF407Q9C0G0 2248 aa16.29■□□□□ 0.2
SMARCD3-202ENST00000356800 CD14P08571 375 aa16.29■□□□□ 0.2
SMARCD3-202ENST00000356800 APEHP13798 732 aaKnown RBP16.29■□□□□ 0.2
SMARCD3-202ENST00000356800 CTXN1P60606 82 aa16.29■□□□□ 0.2
SMARCD3-202ENST00000356800 PPIAP62937 165 aaKnown RBP16.29■□□□□ 0.2
SMARCD3-202ENST00000356800 GPR141Q7Z602 305 aa16.29■□□□□ 0.2
SMARCD3-202ENST00000356800 SCAIQ8N9R8 606 aa16.29■□□□□ 0.2
SMARCD3-202ENST00000356800 SMPDL3BQ92485 455 aa16.29■□□□□ 0.2
SMARCD3-202ENST00000356800 MIB2Q96AX9 1013 aa16.29■□□□□ 0.2
SMARCD3-202ENST00000356800 TAPBPLQ9BX59 468 aa16.29■□□□□ 0.2
SMARCD3-202ENST00000356800 CDCA4Q9BXL8 241 aa16.29■□□□□ 0.2
SMARCD3-202ENST00000356800 NDEL1Q9GZM8 345 aa16.29■□□□□ 0.2
SMARCD3-202ENST00000356800 HINT3Q9NQE9 182 aaKnown RBP16.29■□□□□ 0.2
SMARCD3-202ENST00000356800 ALPK2Q86TB3 2170 aa16.28■□□□□ 0.2
SMARCD3-202ENST00000356800 TRAV17A0A0B4J275 112 aa16.28■□□□□ 0.2
SMARCD3-202ENST00000356800 A0A0J9YW62 118 aa16.28■□□□□ 0.2
SMARCD3-202ENST00000356800 RIIAD1A6NNX1 92 aa16.28■□□□□ 0.2
SMARCD3-202ENST00000356800 C11orf98E9PRG8 122 aa16.28■□□□□ 0.2
SMARCD3-202ENST00000356800 MS4A18H0YCH9 400 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms