RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 TMEM184AQ6ZMB5 413 aa11.39□□□□□ -0.59
COLCA1-201ENST00000355430 RNF113BQ8IZP6 322 aaKnown RBP11.39□□□□□ -0.59
COLCA1-201ENST00000355430 ZNF283Q8N7M2 679 aa11.39□□□□□ -0.59
COLCA1-201ENST00000355430 TMEM99Q8N816 258 aa11.39□□□□□ -0.59
COLCA1-201ENST00000355430 BBS1Q8NFJ9 593 aa11.39□□□□□ -0.59
COLCA1-201ENST00000355430 ZNF436Q9C0F3 470 aaPredicted RBP11.39□□□□□ -0.59
COLCA1-201ENST00000355430 OR5K3A6NET4 321 aa11.38□□□□□ -0.59
COLCA1-201ENST00000355430 PHYHO14832 338 aa11.38□□□□□ -0.59
COLCA1-201ENST00000355430 CSTBP04080 98 aaKnown RBP11.38□□□□□ -0.59
COLCA1-201ENST00000355430 GLB1P16278 677 aa11.38□□□□□ -0.59
COLCA1-201ENST00000355430 ZNF43P17038 809 aa11.38□□□□□ -0.59
COLCA1-201ENST00000355430 FAM189A2Q15884 450 aa11.38□□□□□ -0.59
COLCA1-201ENST00000355430 ULK3Q6PHR2 472 aa11.38□□□□□ -0.59
COLCA1-201ENST00000355430 LINC00696Q6ZRV3 163 aa11.38□□□□□ -0.59
COLCA1-201ENST00000355430 RNF165Q6ZSG1 346 aa11.38□□□□□ -0.59
COLCA1-201ENST00000355430 UEVLDQ8IX04 471 aa11.38□□□□□ -0.59
COLCA1-201ENST00000355430 FAM122AQ96E09 287 aa11.38□□□□□ -0.59
COLCA1-201ENST00000355430 ELP4Q96EB1 424 aa11.38□□□□□ -0.59
COLCA1-201ENST00000355430 OR2A14Q96R47 310 aa11.38□□□□□ -0.59
COLCA1-201ENST00000355430 OR14A2Q96R54 314 aa11.38□□□□□ -0.59
COLCA1-201ENST00000355430 OR2S2Q9NQN1 319 aa11.38□□□□□ -0.59
COLCA1-201ENST00000355430 C14orf166Q9Y224 244 aaKnown RBP11.38□□□□□ -0.59
COLCA1-201ENST00000355430 CCL27Q9Y4X3 112 aa11.38□□□□□ -0.59
COLCA1-201ENST00000355430 H3BML4 177 aa11.38□□□□□ -0.59
COLCA1-201ENST00000355430 AKR7A2O43488 359 aa11.38□□□□□ -0.59
COLCA1-201ENST00000355430 UBL3O95164 117 aa11.38□□□□□ -0.59
COLCA1-201ENST00000355430 RAB2AP61019 212 aa11.38□□□□□ -0.59
COLCA1-201ENST00000355430 DPTQ07507 201 aa11.38□□□□□ -0.59
COLCA1-201ENST00000355430 TMEM150AQ86TG1 271 aa11.38□□□□□ -0.59
COLCA1-201ENST00000355430 ETFBKMTQ8IXQ9 262 aa11.38□□□□□ -0.59
COLCA1-201ENST00000355430 SLC16A11Q8NCK7 471 aa11.38□□□□□ -0.59
COLCA1-201ENST00000355430 SP7Q8TDD2 431 aaPredicted RBP11.38□□□□□ -0.59
COLCA1-201ENST00000355430 SAV1Q9H4B6 383 aaPredicted RBP11.38□□□□□ -0.59
COLCA1-201ENST00000355430 FKBP14Q9NWM8 211 aa11.38□□□□□ -0.59
COLCA1-201ENST00000355430 GLTPQ9NZD2 209 aa11.38□□□□□ -0.59
COLCA1-201ENST00000355430 RPH3AQ9Y2J0 694 aaPredicted RBP11.38□□□□□ -0.59
COLCA1-201ENST00000355430 MMACHCQ9Y4U1 282 aa11.38□□□□□ -0.59
COLCA1-201ENST00000355430 RGPD4Q7Z3J3 1758 aa11.38□□□□□ -0.59
COLCA1-201ENST00000355430 PRRC2BQ5JSZ5 2229 aaKnown RBP11.38□□□□□ -0.59
COLCA1-201ENST00000355430 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.38□□□□□ -0.59
COLCA1-201ENST00000355430 WRBO00258 174 aa11.38□□□□□ -0.59
COLCA1-201ENST00000355430 IFNA21P01568 189 aa11.38□□□□□ -0.59
COLCA1-201ENST00000355430 APOC1P02654 83 aa11.38□□□□□ -0.59
COLCA1-201ENST00000355430 CHRM4P08173 479 aa11.38□□□□□ -0.59
COLCA1-201ENST00000355430 AKAIN1P0CW23 69 aa11.38□□□□□ -0.59
COLCA1-201ENST00000355430 VEGFCP49767 419 aa11.38□□□□□ -0.59
COLCA1-201ENST00000355430 ZXDAP98168 799 aa11.38□□□□□ -0.59
COLCA1-201ENST00000355430 ABHD17CQ6PCB6 329 aa11.38□□□□□ -0.59
COLCA1-201ENST00000355430 PRSS45Q7RTY3 260 aa11.38□□□□□ -0.59
COLCA1-201ENST00000355430 CNEP1R1Q8N9A8 125 aa11.38□□□□□ -0.59
COLCA1-201ENST00000355430 GPR148Q8TDV2 347 aa11.38□□□□□ -0.59
COLCA1-201ENST00000355430 ZNF707Q96C28 371 aaPredicted RBP11.38□□□□□ -0.59
COLCA1-201ENST00000355430 KLHL15Q96M94 604 aa11.38□□□□□ -0.59
COLCA1-201ENST00000355430 MFFQ9GZY8 342 aa11.38□□□□□ -0.59
COLCA1-201ENST00000355430 LRIT2A6NDA9 550 aa11.38□□□□□ -0.59
COLCA1-201ENST00000355430 M0R036 132 aa11.38□□□□□ -0.59
COLCA1-201ENST00000355430 HRO43593 1189 aa11.38□□□□□ -0.59
COLCA1-201ENST00000355430 LSSP48449 732 aa11.38□□□□□ -0.59
COLCA1-201ENST00000355430 PRKXP51817 358 aa11.38□□□□□ -0.59
COLCA1-201ENST00000355430 SSX1Q16384 188 aa11.38□□□□□ -0.59
COLCA1-201ENST00000355430 VASH1Q7L8A9 365 aaPredicted RBP11.38□□□□□ -0.59
COLCA1-201ENST00000355430 KCTD20Q7Z5Y7 419 aa11.38□□□□□ -0.59
COLCA1-201ENST00000355430 BOLLQ8N9W6 283 aaKnown RBP11.38□□□□□ -0.59
COLCA1-201ENST00000355430 ZNF417Q8TAU3 575 aa11.38□□□□□ -0.59
COLCA1-201ENST00000355430 ASB12Q8WXK4 309 aa11.38□□□□□ -0.59
COLCA1-201ENST00000355430 FOXN4Q96NZ1 517 aa11.38□□□□□ -0.59
COLCA1-201ENST00000355430 NRIP3Q9NQ35 241 aa11.38□□□□□ -0.59
COLCA1-201ENST00000355430 TMPRSS11EQ9UL52 423 aa11.38□□□□□ -0.59
COLCA1-201ENST00000355430 H0Y8X5 98 aa11.38□□□□□ -0.59
COLCA1-201ENST00000355430 RAB3DO95716 219 aa11.38□□□□□ -0.59
COLCA1-201ENST00000355430 HRGP04196 525 aa11.38□□□□□ -0.59
COLCA1-201ENST00000355430 PTBP1P26599 531 aaKnown RBP eCLIP11.38□□□□□ -0.597e-6■■□□□ 11.4
COLCA1-201ENST00000355430 ZFP36L2P47974 494 aaKnown RBP11.38□□□□□ -0.59
COLCA1-201ENST00000355430 CSRP3P50461 194 aa11.38□□□□□ -0.59
COLCA1-201ENST00000355430 SIRPAP78324 504 aa11.38□□□□□ -0.59
COLCA1-201ENST00000355430 MRPS10P82664 201 aaKnown RBP11.38□□□□□ -0.59
COLCA1-201ENST00000355430 OPCMLQ14982 345 aa11.38□□□□□ -0.59
COLCA1-201ENST00000355430 RNASE10Q5GAN6 216 aaKnown RBP11.38□□□□□ -0.59
COLCA1-201ENST00000355430 EIF5AL1Q6IS14 154 aaKnown RBP11.38□□□□□ -0.59
COLCA1-201ENST00000355430 NAXEQ8NCW5 288 aa11.38□□□□□ -0.59
COLCA1-201ENST00000355430 GPR160Q9UJ42 338 aa11.38□□□□□ -0.59
COLCA1-201ENST00000355430 ZNF281Q9Y2X9 895 aa11.38□□□□□ -0.59
COLCA1-201ENST00000355430 CHST2Q9Y4C5 530 aa11.38□□□□□ -0.59
COLCA1-201ENST00000355430 PLEKHM1Q9Y4G2 1056 aa11.38□□□□□ -0.59
COLCA1-201ENST00000355430 TTC3P53804 2025 aa11.37□□□□□ -0.59
COLCA1-201ENST00000355430 TEX13DA0A0J9YY54 714 aaPredicted RBP11.37□□□□□ -0.59
COLCA1-201ENST00000355430 ZNF749O43361 778 aa11.37□□□□□ -0.59
COLCA1-201ENST00000355430 ITGB8P26012 769 aa11.37□□□□□ -0.59
COLCA1-201ENST00000355430 BSGP35613 385 aa11.37□□□□□ -0.59
COLCA1-201ENST00000355430 KIR2DL3P43628 341 aa11.37□□□□□ -0.59
COLCA1-201ENST00000355430 GRAMD2AQ8IUY3 354 aa11.37□□□□□ -0.59
COLCA1-201ENST00000355430 ANKRD19PQ9H560 264 aa11.37□□□□□ -0.59
COLCA1-201ENST00000355430 PTTG3PQ9NZH4 202 aa11.37□□□□□ -0.59
COLCA1-201ENST00000355430 A0A0A6YYJ9 748 aa11.37□□□□□ -0.59
COLCA1-201ENST00000355430 SFTPBP07988 381 aa11.37□□□□□ -0.59
COLCA1-201ENST00000355430 TEAD1P28347 426 aa11.37□□□□□ -0.59
COLCA1-201ENST00000355430 LTBQ06643 244 aa11.37□□□□□ -0.59
COLCA1-201ENST00000355430 ECH1Q13011 328 aa11.37□□□□□ -0.59
COLCA1-201ENST00000355430 ALKAL2Q6UX46 152 aa11.37□□□□□ -0.59
COLCA1-201ENST00000355430 CAMKMTQ7Z624 323 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms