RNA–Protein interactions for RNA: ENST00000353855.6

DNMT3B-204, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 5 BASIC

Gene DNMT3B, Length 4,237 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-204ENST00000353855 SLC22A23A1A5C7 686 aa13.15□□□□□ -0.3
DNMT3B-204ENST00000353855 GPR89AB7ZAQ6 455 aa13.15□□□□□ -0.3
DNMT3B-204ENST00000353855 GPR89BP0CG08 455 aa13.15□□□□□ -0.3
DNMT3B-204ENST00000353855 FOSL1P15407 271 aa13.15□□□□□ -0.3
DNMT3B-204ENST00000353855 TIMP2P16035 220 aa13.15□□□□□ -0.3
DNMT3B-204ENST00000353855 CD80P33681 288 aa13.15□□□□□ -0.3
DNMT3B-204ENST00000353855 VITQ6UXI7 678 aa13.15□□□□□ -0.3
DNMT3B-204ENST00000353855 OR4D10Q8NGI6 311 aa13.15□□□□□ -0.3
DNMT3B-204ENST00000353855 OR14K1Q8NGZ2 314 aa13.15□□□□□ -0.3
DNMT3B-204ENST00000353855 NKX3-1Q99801 234 aaPredicted RBP13.15□□□□□ -0.3
DNMT3B-204ENST00000353855 SSX3Q99909 188 aa13.15□□□□□ -0.3
DNMT3B-204ENST00000353855 ADAT1Q9BUB4 502 aaKnown RBP13.15□□□□□ -0.3
DNMT3B-204ENST00000353855 FITM1A5D6W6 292 aa13.15□□□□□ -0.31
DNMT3B-204ENST00000353855 IFITM5A6NNB3 132 aa13.15□□□□□ -0.31
DNMT3B-204ENST00000353855 GCM2O75603 506 aaPredicted RBP13.15□□□□□ -0.31
DNMT3B-204ENST00000353855 CD3DP04234 171 aa13.15□□□□□ -0.31
DNMT3B-204ENST00000353855 HCKP08631 526 aa13.15□□□□□ -0.31
DNMT3B-204ENST00000353855 F3P13726 295 aa13.15□□□□□ -0.31
DNMT3B-204ENST00000353855 EPHA4P54764 986 aa13.15□□□□□ -0.31
DNMT3B-204ENST00000353855 PGAP1Q75T13 922 aa13.15□□□□□ -0.31
DNMT3B-204ENST00000353855 GAREM2Q75VX8 874 aa13.15□□□□□ -0.31
DNMT3B-204ENST00000353855 PXKQ7Z7A4 578 aa13.15□□□□□ -0.31
DNMT3B-204ENST00000353855 SLC35F3Q8IY50 421 aa13.15□□□□□ -0.31
DNMT3B-204ENST00000353855 RAB11FIP5Q9BXF6 653 aa13.15□□□□□ -0.31
DNMT3B-204ENST00000353855 SMCO4Q9NRQ5 59 aa13.15□□□□□ -0.31
DNMT3B-204ENST00000353855 ZFP57Q9NU63 452 aa13.15□□□□□ -0.31
DNMT3B-204ENST00000353855 PCDHB10Q9UN67 800 aa13.15□□□□□ -0.31
DNMT3B-204ENST00000353855 C14orf166Q9Y224 244 aaKnown RBP13.15□□□□□ -0.31
DNMT3B-204ENST00000353855 LTBP4Q8N2S1 1624 aa13.14□□□□□ -0.31
DNMT3B-204ENST00000353855 RHPN2P1A8MT19 583 aa13.14□□□□□ -0.31
DNMT3B-204ENST00000353855 TRIM77I1YAP6 450 aa13.14□□□□□ -0.31
DNMT3B-204ENST00000353855 BET1O15155 118 aa13.14□□□□□ -0.31
DNMT3B-204ENST00000353855 SRPX2O60687 465 aaPredicted RBP13.14□□□□□ -0.31
DNMT3B-204ENST00000353855 IGLV3-27P01718 113 aa13.14□□□□□ -0.31
DNMT3B-204ENST00000353855 HOXD4P09016 255 aaPredicted RBP13.14□□□□□ -0.31
DNMT3B-204ENST00000353855 CNR1P21554 472 aa13.14□□□□□ -0.31
DNMT3B-204ENST00000353855 MELKQ14680 651 aa13.14□□□□□ -0.31
DNMT3B-204ENST00000353855 PDZD11Q5EBL8 140 aa13.14□□□□□ -0.31
DNMT3B-204ENST00000353855 MORN1Q5T089 497 aa13.14□□□□□ -0.31
DNMT3B-204ENST00000353855 C3orf33Q6P1S2 294 aa13.14□□□□□ -0.31
DNMT3B-204ENST00000353855 CHRDQ9H2X0 955 aa13.14□□□□□ -0.31
DNMT3B-204ENST00000353855 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.14□□□□□ -0.31
DNMT3B-204ENST00000353855 PUS1Q9Y606 427 aaKnown RBP eCLIP13.14□□□□□ -0.31
DNMT3B-204ENST00000353855 MIA3Q5JRA6 1907 aa13.14□□□□□ -0.31
DNMT3B-204ENST00000353855 TSPAN11A1L157 253 aa13.14□□□□□ -0.31
DNMT3B-204ENST00000353855 C7orf66A4D0T2 115 aa13.14□□□□□ -0.31
DNMT3B-204ENST00000353855 F11P03951 625 aa13.14□□□□□ -0.31
DNMT3B-204ENST00000353855 NMBP08949 121 aa13.14□□□□□ -0.31
DNMT3B-204ENST00000353855 POU3F4P49335 361 aa13.14□□□□□ -0.31
DNMT3B-204ENST00000353855 TEAD2Q15562 447 aa13.14□□□□□ -0.31
DNMT3B-204ENST00000353855 OR4C16Q8NGL9 310 aa13.14□□□□□ -0.31
DNMT3B-204ENST00000353855 SENP5Q96HI0 755 aaPredicted RBP13.14□□□□□ -0.31
DNMT3B-204ENST00000353855 GPA33Q99795 319 aa13.14□□□□□ -0.31
DNMT3B-204ENST00000353855 RNF208Q9H0X6 261 aa13.14□□□□□ -0.31
DNMT3B-204ENST00000353855 SEC61A2Q9H9S3 476 aa13.14□□□□□ -0.31
DNMT3B-204ENST00000353855 APMAPQ9HDC9 416 aa13.14□□□□□ -0.31
DNMT3B-204ENST00000353855 ZNF701Q9NV72 531 aaPredicted RBP13.14□□□□□ -0.31
DNMT3B-204ENST00000353855 ZNF223Q9UK11 482 aaPredicted RBP13.14□□□□□ -0.31
DNMT3B-204ENST00000353855 HTR3BO95264 441 aa13.14□□□□□ -0.31
DNMT3B-204ENST00000353855 TXNDC12O95881 172 aa13.14□□□□□ -0.31
DNMT3B-204ENST00000353855 F13BP05160 661 aa13.14□□□□□ -0.31
DNMT3B-204ENST00000353855 RPS27P42677 84 aaKnown RBP13.14□□□□□ -0.31
DNMT3B-204ENST00000353855 KCNJ3P48549 501 aa13.14□□□□□ -0.31
DNMT3B-204ENST00000353855 PCBP3P57721 371 aaKnown RBP13.14□□□□□ -0.31
DNMT3B-204ENST00000353855 GUCA2AQ02747 115 aa13.14□□□□□ -0.31
DNMT3B-204ENST00000353855 AGERQ15109 404 aa13.14□□□□□ -0.31
DNMT3B-204ENST00000353855 EIF2S3LQ2VIR3 472 aaKnown RBP13.14□□□□□ -0.31
DNMT3B-204ENST00000353855 AKR1C8PQ5T2L2 129 aa13.14□□□□□ -0.31
DNMT3B-204ENST00000353855 ZNF550Q7Z398 422 aa13.14□□□□□ -0.31
DNMT3B-204ENST00000353855 PLPP7Q8NBV4 271 aa13.14□□□□□ -0.31
DNMT3B-204ENST00000353855 TMEM14AQ9Y6G1 99 aa13.14□□□□□ -0.31
DNMT3B-204ENST00000353855 KCNE3Q9Y6H6 103 aa13.14□□□□□ -0.31
DNMT3B-204ENST00000353855 OR5K3A6NET4 321 aa13.13□□□□□ -0.31
DNMT3B-204ENST00000353855 KDM4EB2RXH2 506 aaPredicted RBP13.13□□□□□ -0.31
DNMT3B-204ENST00000353855 CLDN4O14493 209 aa13.13□□□□□ -0.31
DNMT3B-204ENST00000353855 GABRA1P14867 456 aa13.13□□□□□ -0.31
DNMT3B-204ENST00000353855 RAB28P51157 221 aa13.13□□□□□ -0.31
DNMT3B-204ENST00000353855 P2RX1P51575 399 aa13.13□□□□□ -0.31
DNMT3B-204ENST00000353855 IRF4Q15306 451 aa13.13□□□□□ -0.31
DNMT3B-204ENST00000353855 SSX2Q16385 188 aa13.13□□□□□ -0.31
DNMT3B-204ENST00000353855 TMEM91Q6ZNR0 172 aa13.13□□□□□ -0.31
DNMT3B-204ENST00000353855 SLC35D2Q76EJ3 337 aa13.13□□□□□ -0.31
DNMT3B-204ENST00000353855 TMEFF1Q8IYR6 380 aa13.13□□□□□ -0.31
DNMT3B-204ENST00000353855 TEX19Q8NA77 164 aa13.13□□□□□ -0.31
DNMT3B-204ENST00000353855 OR13C3Q8NGS6 347 aa13.13□□□□□ -0.31
DNMT3B-204ENST00000353855 STK35Q8TDR2 534 aa13.13□□□□□ -0.31
DNMT3B-204ENST00000353855 SLC6A18Q96N87 628 aa13.13□□□□□ -0.31
DNMT3B-204ENST00000353855 SCGB3A2Q96PL1 93 aa13.13□□□□□ -0.31
DNMT3B-204ENST00000353855 MRI1Q9BV20 369 aa13.13□□□□□ -0.31
DNMT3B-204ENST00000353855 CA10Q9NS85 328 aa13.13□□□□□ -0.31
DNMT3B-204ENST00000353855 FBXL4Q9UKA2 621 aa13.13□□□□□ -0.31
DNMT3B-204ENST00000353855 TMEM200CA6NKL6 621 aa13.13□□□□□ -0.31
DNMT3B-204ENST00000353855 SOX1O00570 391 aaPredicted RBP13.13□□□□□ -0.31
DNMT3B-204ENST00000353855 ERCC1P07992 297 aaPredicted RBP13.13□□□□□ -0.31
DNMT3B-204ENST00000353855 ITGA5P08648 1049 aa13.13□□□□□ -0.31
DNMT3B-204ENST00000353855 OR8U9P0C7N5 309 aa13.13□□□□□ -0.31
DNMT3B-204ENST00000353855 GAAP10253 952 aa13.13□□□□□ -0.31
DNMT3B-204ENST00000353855 GPNMBQ14956 572 aa13.13□□□□□ -0.31
DNMT3B-204ENST00000353855 Q499Y3 187 aa13.13□□□□□ -0.31
DNMT3B-204ENST00000353855 DCST2Q5T1A1 773 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms