RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 1 (best) BASIC

Gene UPF3A, Length 2,235 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 RABL2AQ9UBK7 228 aaPredicted RBP20.17■□□□□ 0.82
UPF3A-201ENST00000351487 RABL2BQ9UNT1 228 aa20.17■□□□□ 0.82
UPF3A-201ENST00000351487 ZNF281Q9Y2X9 895 aa20.17■□□□□ 0.82
UPF3A-201ENST00000351487 PCDHGA9Q9Y5G4 932 aaKnown RBP20.17■□□□□ 0.82
UPF3A-201ENST00000351487 PRR32B1ATL7 298 aa20.17■□□□□ 0.82
UPF3A-201ENST00000351487 BLOC1S5-TXNDC5H3BN57 136 aa20.17■□□□□ 0.82
UPF3A-201ENST00000351487 PIN1P1O15428 100 aa20.17■□□□□ 0.82
UPF3A-201ENST00000351487 GSTZ1O43708 216 aaPredicted RBP20.17■□□□□ 0.82
UPF3A-201ENST00000351487 PRKNO60260 465 aaPredicted RBP20.17■□□□□ 0.82
UPF3A-201ENST00000351487 UTS2O95399 124 aa20.17■□□□□ 0.82
UPF3A-201ENST00000351487 SRMP19623 302 aa20.17■□□□□ 0.82
UPF3A-201ENST00000351487 CD27P26842 260 aa20.17■□□□□ 0.82
UPF3A-201ENST00000351487 CD38P28907 300 aa20.17■□□□□ 0.82
UPF3A-201ENST00000351487 CCR4P51679 360 aa20.17■□□□□ 0.82
UPF3A-201ENST00000351487 ALG10Q5BKT4 473 aa20.17■□□□□ 0.82
UPF3A-201ENST00000351487 SLC6A19Q695T7 634 aa20.17■□□□□ 0.82
UPF3A-201ENST00000351487 APOOLQ6UXV4 268 aa20.17■□□□□ 0.82
UPF3A-201ENST00000351487 SLC16A9Q7RTY1 509 aa20.17■□□□□ 0.82
UPF3A-201ENST00000351487 TOMM5Q8N4H5 51 aa20.17■□□□□ 0.82
UPF3A-201ENST00000351487 ZNF321PQ8N8H1 164 aa20.17■□□□□ 0.82
UPF3A-201ENST00000351487 LSM14AQ8ND56 463 aaKnown RBP20.17■□□□□ 0.82
UPF3A-201ENST00000351487 SCMH1Q96GD3 660 aa20.17■□□□□ 0.82
UPF3A-201ENST00000351487 FRG2CA6NGY1 282 aa20.16■□□□□ 0.82
UPF3A-201ENST00000351487 EVI2BP34910 448 aa20.16■□□□□ 0.82
UPF3A-201ENST00000351487 DGCR2P98153 550 aa20.16■□□□□ 0.82
UPF3A-201ENST00000351487 UBE2NLQ5JXB2 153 aa20.16■□□□□ 0.82
UPF3A-201ENST00000351487 LGALS14Q8TCE9 139 aa20.16■□□□□ 0.82
UPF3A-201ENST00000351487 C7orf50Q9BRJ6 194 aaKnown RBP20.16■□□□□ 0.82
UPF3A-201ENST00000351487 TPSD1Q9BZJ3 242 aa20.16■□□□□ 0.82
UPF3A-201ENST00000351487 C12orf10Q9HB07 376 aa20.16■□□□□ 0.82
UPF3A-201ENST00000351487 CLEC4AQ9UMR7 237 aa20.16■□□□□ 0.82
UPF3A-201ENST00000351487 NUBP2Q9Y5Y2 271 aa20.16■□□□□ 0.82
UPF3A-201ENST00000351487 MAU2Q9Y6X3 613 aa20.16■□□□□ 0.82
UPF3A-201ENST00000351487 A0A0A6YYJ9 748 aa20.15■□□□□ 0.82
UPF3A-201ENST00000351487 TMEM150CB9EJG8 249 aa20.15■□□□□ 0.82
UPF3A-201ENST00000351487 CPNE3O75131 537 aaKnown RBP20.15■□□□□ 0.82
UPF3A-201ENST00000351487 DHFRP00374 187 aa20.15■□□□□ 0.82
UPF3A-201ENST00000351487 CD3GP09693 182 aa20.15■□□□□ 0.82
UPF3A-201ENST00000351487 RORAP35398 523 aa20.15■□□□□ 0.82
UPF3A-201ENST00000351487 NANOS3P60323 173 aaKnown RBP20.15■□□□□ 0.82
UPF3A-201ENST00000351487 MRPL28Q13084 256 aaKnown RBP20.15■□□□□ 0.82
UPF3A-201ENST00000351487 GRPEL2Q8TAA5 225 aa20.15■□□□□ 0.82
UPF3A-201ENST00000351487 ADAMTS14Q8WXS8 1223 aa20.15■□□□□ 0.82
UPF3A-201ENST00000351487 OR1F2PQ96R84 312 aa20.15■□□□□ 0.82
UPF3A-201ENST00000351487 PNO1Q9NRX1 252 aaKnown RBP20.15■□□□□ 0.82
UPF3A-201ENST00000351487 NUDT15Q9NV35 164 aa20.15■□□□□ 0.82
UPF3A-201ENST00000351487 COPZ2Q9P299 210 aa20.15■□□□□ 0.82
UPF3A-201ENST00000351487 IGKV3D-11A0A0A0MRZ8 115 aa20.15■□□□□ 0.82
UPF3A-201ENST00000351487 H3BMH7 237 aa20.15■□□□□ 0.82
UPF3A-201ENST00000351487 PDCD5O14737 125 aa20.15■□□□□ 0.82
UPF3A-201ENST00000351487 SERPINI2O75830 405 aa20.15■□□□□ 0.82
UPF3A-201ENST00000351487 IGKV3-11P04433 115 aa20.15■□□□□ 0.82
UPF3A-201ENST00000351487 CTXN1P60606 82 aa20.15■□□□□ 0.82
UPF3A-201ENST00000351487 LTBQ06643 244 aa20.15■□□□□ 0.82
UPF3A-201ENST00000351487 EMC4Q5J8M3 183 aa20.15■□□□□ 0.82
UPF3A-201ENST00000351487 KCTD20Q7Z5Y7 419 aa20.15■□□□□ 0.82
UPF3A-201ENST00000351487 C10orf53Q8N6V4 93 aa20.15■□□□□ 0.82
UPF3A-201ENST00000351487 ZNF671Q8TAW3 534 aa20.15■□□□□ 0.82
UPF3A-201ENST00000351487 RGP1Q92546 391 aaPredicted RBP20.15■□□□□ 0.82
UPF3A-201ENST00000351487 LCORQ96JN0 433 aaPredicted RBP20.15■□□□□ 0.82
UPF3A-201ENST00000351487 LPAR4Q99677 370 aa20.15■□□□□ 0.82
UPF3A-201ENST00000351487 GFI1Q99684 422 aa20.15■□□□□ 0.82
UPF3A-201ENST00000351487 SMAD5Q99717 465 aaKnown RBP20.15■□□□□ 0.82
UPF3A-201ENST00000351487 CUTCQ9NTM9 273 aa20.15■□□□□ 0.82
UPF3A-201ENST00000351487 MRTO4Q9UKD2 239 aaKnown RBP20.15■□□□□ 0.82
UPF3A-201ENST00000351487 A0A1B0GVT2 93 aa20.14■□□□□ 0.81
UPF3A-201ENST00000351487 C4orf47A7E2U8 309 aa20.14■□□□□ 0.81
UPF3A-201ENST00000351487 IDSB3KWA1 339 aa20.14■□□□□ 0.81
UPF3A-201ENST00000351487 ZFPL1O95159 310 aa20.14■□□□□ 0.81
UPF3A-201ENST00000351487 BCL2L15Q5TBC7 163 aa20.14■□□□□ 0.81
UPF3A-201ENST00000351487 SIAH3Q8IW03 269 aa20.14■□□□□ 0.81
UPF3A-201ENST00000351487 TMEM151BQ8IW70 566 aa20.14■□□□□ 0.81
UPF3A-201ENST00000351487 ZNF511Q8NB15 262 aa20.14■□□□□ 0.81
UPF3A-201ENST00000351487 SMIM4Q8WVI0 70 aa20.14■□□□□ 0.81
UPF3A-201ENST00000351487 ADIPOR1Q96A54 375 aa20.14■□□□□ 0.81
UPF3A-201ENST00000351487 GHITMQ9H3K2 345 aa20.14■□□□□ 0.81
UPF3A-201ENST00000351487 ANKRD10Q9NXR5 420 aa20.14■□□□□ 0.81
UPF3A-201ENST00000351487 AIPO00170 330 aa20.14■□□□□ 0.81
UPF3A-201ENST00000351487 TCRBP04435 133 aa20.14■□□□□ 0.81
UPF3A-201ENST00000351487 ZNF524Q96C55 264 aa20.14■□□□□ 0.81
UPF3A-201ENST00000351487 MVB12AQ96EY5 273 aa20.14■□□□□ 0.81
UPF3A-201ENST00000351487 ZDHHC12Q96GR4 267 aa20.14■□□□□ 0.81
UPF3A-201ENST00000351487 ZFP3Q96NJ6 502 aa20.14■□□□□ 0.81
UPF3A-201ENST00000351487 DERL3Q96Q80 235 aa20.14■□□□□ 0.81
UPF3A-201ENST00000351487 IFITM5A6NNB3 132 aa20.13■□□□□ 0.81
UPF3A-201ENST00000351487 METTL12A8MUP2 240 aa20.13■□□□□ 0.81
UPF3A-201ENST00000351487 TACSTD2P09758 323 aa20.13■□□□□ 0.81
UPF3A-201ENST00000351487 MAOBP27338 520 aa20.13■□□□□ 0.81
UPF3A-201ENST00000351487 GRPRP30550 384 aa20.13■□□□□ 0.81
UPF3A-201ENST00000351487 LCN1P31025 176 aa20.13■□□□□ 0.81
UPF3A-201ENST00000351487 PPM1FP49593 454 aaPredicted RBP20.13■□□□□ 0.81
UPF3A-201ENST00000351487 ESPNLQ6ZVH7 1005 aa20.13■□□□□ 0.81
UPF3A-201ENST00000351487 TIGD4Q8IY51 512 aa20.13■□□□□ 0.81
UPF3A-201ENST00000351487 CLIP3Q96DZ5 547 aa20.13■□□□□ 0.81
UPF3A-201ENST00000351487 OR8D2Q9GZM6 311 aa20.13■□□□□ 0.81
UPF3A-201ENST00000351487 LAT2Q9GZY6 243 aa20.13■□□□□ 0.81
UPF3A-201ENST00000351487 ADAM19Q9H013 955 aa20.13■□□□□ 0.81
UPF3A-201ENST00000351487 ACOD1A6NK06 481 aa20.12■□□□□ 0.81
UPF3A-201ENST00000351487 FAM171A2A8MVW0 826 aa20.12■□□□□ 0.81
UPF3A-201ENST00000351487 DDAH2O95865 285 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms