RNA–Protein interactions for RNA: ENST00000348962.6

PTPRO-202, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-202ENST00000348962 WDR76Q9H967 626 aa14.27□□□□□ -0.13
PTPRO-202ENST00000348962 NDRG4Q9ULP0 352 aaKnown RBP14.27□□□□□ -0.13
PTPRO-202ENST00000348962 TRIM64CA6NLI5 447 aa14.27□□□□□ -0.13
PTPRO-202ENST00000348962 DSCR3O14972 297 aa14.27□□□□□ -0.13
PTPRO-202ENST00000348962 IGLV3-25P01717 112 aa14.27□□□□□ -0.13
PTPRO-202ENST00000348962 SELPLGQ14242 412 aa14.27□□□□□ -0.13
PTPRO-202ENST00000348962 DEFB109BQ30KR1 87 aa14.27□□□□□ -0.13
PTPRO-202ENST00000348962 DPY19L2P1Q6NXN4 242 aa14.27□□□□□ -0.13
PTPRO-202ENST00000348962 CPEB2Q7Z5Q1 589 aaKnown RBP14.27□□□□□ -0.13
PTPRO-202ENST00000348962 CPEB3Q8NE35 698 aaKnown RBP14.27□□□□□ -0.13
PTPRO-202ENST00000348962 OR56B1Q8NGI3 324 aa14.27□□□□□ -0.13
PTPRO-202ENST00000348962 OR2T11Q8NH01 316 aa14.27□□□□□ -0.13
PTPRO-202ENST00000348962 C11orf40Q8WZ69 217 aa14.27□□□□□ -0.13
PTPRO-202ENST00000348962 OR5B12Q96R08 314 aa14.27□□□□□ -0.13
PTPRO-202ENST00000348962 UNKLQ9H9P5 680 aaKnown RBP14.27□□□□□ -0.13
PTPRO-202ENST00000348962 C19orf53Q9UNZ5 99 aaPredicted RBP14.27□□□□□ -0.13
PTPRO-202ENST00000348962 GFYI3L273 518 aa14.26□□□□□ -0.13
PTPRO-202ENST00000348962 GPR3P46089 330 aa14.26□□□□□ -0.13
PTPRO-202ENST00000348962 GPR85P60893 370 aa14.26□□□□□ -0.13
PTPRO-202ENST00000348962 RPL23AP62750 156 aaKnown RBP14.26□□□□□ -0.13
PTPRO-202ENST00000348962 MLLT11Q13015 90 aaPredicted RBP14.26□□□□□ -0.13
PTPRO-202ENST00000348962 METTL11BQ5VVY1 283 aa14.26□□□□□ -0.13
PTPRO-202ENST00000348962 Q6ZNB5 142 aa14.26□□□□□ -0.13
PTPRO-202ENST00000348962 CAMKMTQ7Z624 323 aa14.26□□□□□ -0.13
PTPRO-202ENST00000348962 MORN4Q8NDC4 146 aa14.26□□□□□ -0.13
PTPRO-202ENST00000348962 PRRX2Q99811 253 aa14.26□□□□□ -0.13
PTPRO-202ENST00000348962 RGCCQ9H4X1 137 aa14.26□□□□□ -0.13
PTPRO-202ENST00000348962 TMEM38AQ9H6F2 299 aa14.26□□□□□ -0.13
PTPRO-202ENST00000348962 POLE4Q9NR33 117 aa14.26□□□□□ -0.13
PTPRO-202ENST00000348962 PKD1L3Q7Z443 1732 aa14.26□□□□□ -0.13
PTPRO-202ENST00000348962 PRAMEF27A3QJZ7 478 aa14.26□□□□□ -0.13
PTPRO-202ENST00000348962 TMEM221A6NGB7 291 aa14.26□□□□□ -0.13
PTPRO-202ENST00000348962 OR6C76A6NM76 312 aa14.26□□□□□ -0.13
PTPRO-202ENST00000348962 A8MV72 311 aaPredicted RBP14.26□□□□□ -0.13
PTPRO-202ENST00000348962 NRG2O14511 850 aaPredicted RBP14.26□□□□□ -0.13
PTPRO-202ENST00000348962 SHOXO15266 292 aa14.26□□□□□ -0.13
PTPRO-202ENST00000348962 B4GAT1O43505 415 aa14.26□□□□□ -0.13
PTPRO-202ENST00000348962 B3GALT4O96024 378 aa14.26□□□□□ -0.13
PTPRO-202ENST00000348962 RAB40ALP0C0E4 278 aa14.26□□□□□ -0.13
PTPRO-202ENST00000348962 CDK4P11802 303 aa14.26□□□□□ -0.13
PTPRO-202ENST00000348962 GCAP28676 217 aa14.26□□□□□ -0.13
PTPRO-202ENST00000348962 LEXMQ3ZCV2 418 aa14.26□□□□□ -0.13
PTPRO-202ENST00000348962 VWA2Q5GFL6 755 aa14.26□□□□□ -0.13
PTPRO-202ENST00000348962 SERPINA12Q8IW75 414 aa14.26□□□□□ -0.13
PTPRO-202ENST00000348962 RAB40AQ8WXH6 277 aa14.26□□□□□ -0.13
PTPRO-202ENST00000348962 UPRTQ96BW1 309 aa14.26□□□□□ -0.13
PTPRO-202ENST00000348962 ZNF583Q96ND8 569 aa14.26□□□□□ -0.13
PTPRO-202ENST00000348962 UBQLN2Q9UHD9 624 aa14.26□□□□□ -0.13
PTPRO-202ENST00000348962 CDHR4A6H8M9 788 aa14.26□□□□□ -0.13
PTPRO-202ENST00000348962 GPR137BO60478 399 aa14.26□□□□□ -0.13
PTPRO-202ENST00000348962 PRAMEF4O60810 478 aa14.26□□□□□ -0.13
PTPRO-202ENST00000348962 NXPH2O95156 264 aa14.26□□□□□ -0.13
PTPRO-202ENST00000348962 CAPNS1P04632 268 aa14.26□□□□□ -0.13
PTPRO-202ENST00000348962 SLC1A3P43003 542 aa14.26□□□□□ -0.13
PTPRO-202ENST00000348962 RPL34P49207 117 aaKnown RBP14.26□□□□□ -0.13
PTPRO-202ENST00000348962 OR8B8Q15620 311 aa14.26□□□□□ -0.13
PTPRO-202ENST00000348962 HLA-BQ31612 363 aa14.26□□□□□ -0.13
PTPRO-202ENST00000348962 ZNF750Q32MQ0 723 aa14.26□□□□□ -0.13
PTPRO-202ENST00000348962 ZNF808Q8N4W9 903 aaPredicted RBP14.26□□□□□ -0.13
PTPRO-202ENST00000348962 ZC3HAV1LQ96H79 300 aaKnown RBP14.26□□□□□ -0.13
PTPRO-202ENST00000348962 FBXO7Q9Y3I1 522 aa14.26□□□□□ -0.13
PTPRO-202ENST00000348962 ZNF92Q03936 586 aa14.26□□□□□ -0.13
PTPRO-202ENST00000348962 ZMAT1Q5H9K5 638 aa14.26□□□□□ -0.13
PTPRO-202ENST00000348962 BRIX1Q8TDN6 353 aaKnown RBP14.26□□□□□ -0.13
PTPRO-202ENST00000348962 NMNAT3Q96T66 252 aa14.26□□□□□ -0.13
PTPRO-202ENST00000348962 MYH7P12883 1935 aa14.26□□□□□ -0.13
PTPRO-202ENST00000348962 PRAF2O60831 178 aa14.25□□□□□ -0.13
PTPRO-202ENST00000348962 BDKRB2P30411 391 aa14.25□□□□□ -0.13
PTPRO-202ENST00000348962 EIF3IQ13347 325 aaKnown RBP14.25□□□□□ -0.13
PTPRO-202ENST00000348962 MTFR2Q6P444 385 aa14.25□□□□□ -0.13
PTPRO-202ENST00000348962 SLC16A9Q7RTY1 509 aa14.25□□□□□ -0.13
PTPRO-202ENST00000348962 TFAP2CQ92754 450 aa14.25□□□□□ -0.13
PTPRO-202ENST00000348962 PDFQ9HBH1 243 aa14.25□□□□□ -0.13
PTPRO-202ENST00000348962 EBF1Q9UH73 591 aa14.25□□□□□ -0.13
PTPRO-202ENST00000348962 OR51B4Q9Y5P0 310 aa14.25□□□□□ -0.13
PTPRO-202ENST00000348962 GAPDHSO14556 408 aaPredicted RBP14.25□□□□□ -0.13
PTPRO-202ENST00000348962 SEC14L2O76054 403 aa14.25□□□□□ -0.13
PTPRO-202ENST00000348962 GASTP01350 101 aa14.25□□□□□ -0.13
PTPRO-202ENST00000348962 ACVR1Q04771 509 aa14.25□□□□□ -0.13
PTPRO-202ENST00000348962 AGAP6Q5VW22 663 aa14.25□□□□□ -0.13
PTPRO-202ENST00000348962 YRDCQ86U90 279 aaKnown RBP14.25□□□□□ -0.13
PTPRO-202ENST00000348962 BORCS7Q96B45 105 aa14.25□□□□□ -0.13
PTPRO-202ENST00000348962 TMEM59Q9BXS4 323 aa14.25□□□□□ -0.13
PTPRO-202ENST00000348962 DEFB127Q9H1M4 99 aa14.25□□□□□ -0.13
PTPRO-202ENST00000348962 CHRNA9Q9UGM1 479 aa14.25□□□□□ -0.13
PTPRO-202ENST00000348962 RASD1Q9Y272 281 aa14.25□□□□□ -0.13
PTPRO-202ENST00000348962 SPTY2D1-AS1A0A0U1RR47 76 aa14.25□□□□□ -0.13
PTPRO-202ENST00000348962 CEBPZOSA8MTT3 80 aa14.25□□□□□ -0.13
PTPRO-202ENST00000348962 FZD7O75084 574 aa14.25□□□□□ -0.13
PTPRO-202ENST00000348962 T-ENOLP0DO92 83 aa14.25□□□□□ -0.13
PTPRO-202ENST00000348962 IL3RAP26951 378 aa14.25□□□□□ -0.13
PTPRO-202ENST00000348962 SNCAP37840 140 aa14.25□□□□□ -0.13
PTPRO-202ENST00000348962 TOR1AO14656 332 aa14.25□□□□□ -0.13
PTPRO-202ENST00000348962 SORBS2O94875 1100 aaKnown RBP14.25□□□□□ -0.13
PTPRO-202ENST00000348962 IFNA17P01571 189 aa14.25□□□□□ -0.13
PTPRO-202ENST00000348962 CA5AP35218 305 aa14.25□□□□□ -0.13
PTPRO-202ENST00000348962 PPICP45877 212 aa14.25□□□□□ -0.13
PTPRO-202ENST00000348962 TAS2R46P59540 309 aa14.25□□□□□ -0.13
PTPRO-202ENST00000348962 TBCEQ15813 527 aaPredicted RBP14.25□□□□□ -0.13
PTPRO-202ENST00000348962 PGAP1Q75T13 922 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms