RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 PPT1P50897 306 aa14.08□□□□□ -0.15
LMNA-201ENST00000347559 ODF4Q2M2E3 257 aa14.08□□□□□ -0.15
LMNA-201ENST00000347559 FNDC3BQ53EP0 1204 aaKnown RBP14.08□□□□□ -0.15
LMNA-201ENST00000347559 LDLRAD1Q5T700 205 aa14.08□□□□□ -0.15
LMNA-201ENST00000347559 RPL22L1Q6P5R6 122 aaKnown RBP14.08□□□□□ -0.15
LMNA-201ENST00000347559 OR56A1Q8NGH5 318 aa14.08□□□□□ -0.15
LMNA-201ENST00000347559 OR6K6Q8NGW6 343 aa14.08□□□□□ -0.15
LMNA-201ENST00000347559 CDS1Q92903 461 aa14.08□□□□□ -0.15
LMNA-201ENST00000347559 CMTM3Q96MX0 182 aa14.08□□□□□ -0.15
LMNA-201ENST00000347559 NKX3-1Q99801 234 aaPredicted RBP14.08□□□□□ -0.15
LMNA-201ENST00000347559 PRSS27Q9BQR3 290 aa14.08□□□□□ -0.15
LMNA-201ENST00000347559 MEPEQ9NQ76 525 aaPredicted RBP14.08□□□□□ -0.15
LMNA-201ENST00000347559 GHRLQ9UBU3 117 aa14.08□□□□□ -0.15
LMNA-201ENST00000347559 EPHA6Q9UF33 1036 aa14.08□□□□□ -0.15
LMNA-201ENST00000347559 ATG4BQ9Y4P1 393 aa14.08□□□□□ -0.15
LMNA-201ENST00000347559 YIPF1Q9Y548 306 aa14.08□□□□□ -0.15
LMNA-201ENST00000347559 TRAV18A0A075B6X5 111 aa14.08□□□□□ -0.16
LMNA-201ENST00000347559 LTBQ06643 244 aa14.08□□□□□ -0.16
LMNA-201ENST00000347559 ZNF836Q6ZNA1 936 aa14.08□□□□□ -0.16
LMNA-201ENST00000347559 SLC35F2Q8IXU6 374 aa14.08□□□□□ -0.16
LMNA-201ENST00000347559 OR6N1Q8NGY5 312 aa14.08□□□□□ -0.16
LMNA-201ENST00000347559 FIBINQ8TAL6 211 aa14.08□□□□□ -0.16
LMNA-201ENST00000347559 MIB2Q96AX9 1013 aa14.08□□□□□ -0.16
LMNA-201ENST00000347559 TNFRSF13CQ96RJ3 184 aa14.08□□□□□ -0.16
LMNA-201ENST00000347559 CPEB1Q9BZB8 566 aaKnown RBP14.08□□□□□ -0.16
LMNA-201ENST00000347559 C2orf42Q9NWW7 574 aa14.08□□□□□ -0.16
LMNA-201ENST00000347559 NOP16Q9Y3C1 178 aaKnown RBP14.08□□□□□ -0.16
LMNA-201ENST00000347559 WDR45Q9Y484 360 aa14.08□□□□□ -0.16
LMNA-201ENST00000347559 FAM171A2A8MVW0 826 aa14.08□□□□□ -0.16
LMNA-201ENST00000347559 GLSO94925 669 aaPredicted RBP14.08□□□□□ -0.16
LMNA-201ENST00000347559 CSN2P05814 226 aa14.08□□□□□ -0.16
LMNA-201ENST00000347559 PRKAR1BP31321 381 aa14.08□□□□□ -0.16
LMNA-201ENST00000347559 PNLIPRP2P54317 469 aa14.08□□□□□ -0.16
LMNA-201ENST00000347559 KCNAB1Q14722 419 aa14.08□□□□□ -0.16
LMNA-201ENST00000347559 MPPED2Q15777 294 aa14.08□□□□□ -0.16
LMNA-201ENST00000347559 AMZ1Q400G9 498 aa14.08□□□□□ -0.16
LMNA-201ENST00000347559 TMEM151BQ8IW70 566 aa14.08□□□□□ -0.16
LMNA-201ENST00000347559 INTS12Q96CB8 462 aaKnown RBP14.08□□□□□ -0.16
LMNA-201ENST00000347559 SLC35A4Q96G79 324 aa14.08□□□□□ -0.16
LMNA-201ENST00000347559 SPSB2Q99619 263 aa14.08□□□□□ -0.16
LMNA-201ENST00000347559 RPH3AQ9Y2J0 694 aaPredicted RBP14.08□□□□□ -0.16
LMNA-201ENST00000347559 LOC100509620A0A075B734 347 aa14.07□□□□□ -0.16
LMNA-201ENST00000347559 H7C417 338 aa14.07□□□□□ -0.16
LMNA-201ENST00000347559 PAPLNO95428 1278 aa14.07□□□□□ -0.16
LMNA-201ENST00000347559 OR4E1P0C645 316 aa14.07□□□□□ -0.16
LMNA-201ENST00000347559 RAB33AQ14088 237 aa14.07□□□□□ -0.16
LMNA-201ENST00000347559 HABP2Q14520 560 aaPredicted RBP14.07□□□□□ -0.16
LMNA-201ENST00000347559 SLC9A5Q14940 896 aa14.07□□□□□ -0.16
LMNA-201ENST00000347559 PEA15Q15121 130 aa14.07□□□□□ -0.16
LMNA-201ENST00000347559 CORO6Q6QEF8 472 aa14.07□□□□□ -0.16
LMNA-201ENST00000347559 LCTLQ6UWM7 567 aa14.07□□□□□ -0.16
LMNA-201ENST00000347559 OR1J4Q8NGS1 313 aa14.07□□□□□ -0.16
LMNA-201ENST00000347559 OR2A12Q8NGT7 310 aa14.07□□□□□ -0.16
LMNA-201ENST00000347559 OR10R2Q8NGX6 335 aa14.07□□□□□ -0.16
LMNA-201ENST00000347559 CNN2Q99439 309 aaKnown RBP14.07□□□□□ -0.16
LMNA-201ENST00000347559 SLITRK2Q9H156 845 aa14.07□□□□□ -0.16
LMNA-201ENST00000347559 KCNK15Q9H427 330 aa14.07□□□□□ -0.16
LMNA-201ENST00000347559 TRPV4Q9HBA0 871 aa14.07□□□□□ -0.16
LMNA-201ENST00000347559 MTFP1Q9UDX5 166 aa14.07□□□□□ -0.16
LMNA-201ENST00000347559 CDV3Q9UKY7 258 aaKnown RBP14.07□□□□□ -0.16
LMNA-201ENST00000347559 SIGLEC7Q9Y286 467 aa14.07□□□□□ -0.16
LMNA-201ENST00000347559 A0A1W2PR48 441 aa14.07□□□□□ -0.16
LMNA-201ENST00000347559 TRAPPC13A5PLN9 417 aa14.07□□□□□ -0.16
LMNA-201ENST00000347559 EMC8O43402 210 aa14.07□□□□□ -0.16
LMNA-201ENST00000347559 ZFPL1O95159 310 aa14.07□□□□□ -0.16
LMNA-201ENST00000347559 SLC2A5P22732 501 aa14.07□□□□□ -0.16
LMNA-201ENST00000347559 ATP1B3P54709 279 aa14.07□□□□□ -0.16
LMNA-201ENST00000347559 ACTA2P62736 377 aa14.07□□□□□ -0.16
LMNA-201ENST00000347559 ACTG2P63267 376 aa14.07□□□□□ -0.16
LMNA-201ENST00000347559 EIF2S3LQ2VIR3 472 aaKnown RBP14.07□□□□□ -0.16
LMNA-201ENST00000347559 Q6ZNB5 142 aa14.07□□□□□ -0.16
LMNA-201ENST00000347559 PGAP1Q75T13 922 aa14.07□□□□□ -0.16
LMNA-201ENST00000347559 TRIM43Q96BQ3 446 aaPredicted RBP14.07□□□□□ -0.16
LMNA-201ENST00000347559 ZDHHC5Q9C0B5 715 aa14.07□□□□□ -0.16
LMNA-201ENST00000347559 RHBGQ9H310 441 aa14.07□□□□□ -0.16
LMNA-201ENST00000347559 CALML5Q9NZT1 146 aa14.07□□□□□ -0.16
LMNA-201ENST00000347559 TNFSF18Q9UNG2 199 aa14.07□□□□□ -0.16
LMNA-201ENST00000347559 ARID1AO14497 2285 aa14.07□□□□□ -0.16
LMNA-201ENST00000347559 M0QYG6 137 aa14.06□□□□□ -0.16
LMNA-201ENST00000347559 ERI3O43414 337 aaKnown RBP14.06□□□□□ -0.16
LMNA-201ENST00000347559 S100A8P05109 93 aa14.06□□□□□ -0.16
LMNA-201ENST00000347559 FBXO45P0C2W1 286 aa14.06□□□□□ -0.16
LMNA-201ENST00000347559 AKAIN1P0CW23 69 aa14.06□□□□□ -0.16
LMNA-201ENST00000347559 TIMP2P16035 220 aa14.06□□□□□ -0.16
LMNA-201ENST00000347559 IRF5Q13568 498 aa14.06□□□□□ -0.16
LMNA-201ENST00000347559 MLC1Q15049 377 aa14.06□□□□□ -0.16
LMNA-201ENST00000347559 OR1Q1Q15612 314 aa14.06□□□□□ -0.16
LMNA-201ENST00000347559 C11orf87Q6NUJ2 197 aa14.06□□□□□ -0.16
LMNA-201ENST00000347559 STAC2Q6ZMT1 411 aa14.06□□□□□ -0.16
LMNA-201ENST00000347559 TMEM150AQ86TG1 271 aa14.06□□□□□ -0.16
LMNA-201ENST00000347559 RANBP3LQ86VV4 465 aaPredicted RBP14.06□□□□□ -0.16
LMNA-201ENST00000347559 DND1Q8IYX4 353 aaKnown RBP14.06□□□□□ -0.16
LMNA-201ENST00000347559 ELP5Q8TE02 316 aa14.06□□□□□ -0.16
LMNA-201ENST00000347559 PPP1R1CQ8WVI7 109 aa14.06□□□□□ -0.16
LMNA-201ENST00000347559 ARL5BQ96KC2 179 aa14.06□□□□□ -0.16
LMNA-201ENST00000347559 NCDNQ9UBB6 729 aa14.06□□□□□ -0.16
LMNA-201ENST00000347559 HS3ST2Q9Y278 367 aa14.06□□□□□ -0.16
LMNA-201ENST00000347559 ARID1BQ8NFD5 2236 aaPredicted RBP14.06□□□□□ -0.16
LMNA-201ENST00000347559 IMPA2O14732 288 aa14.06□□□□□ -0.16
LMNA-201ENST00000347559 OR2F2O95006 317 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms