RNA–Protein interactions for RNA: ENST00000340192.11

ERCC1-203, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-203ENST00000340192 OXGR1Q96P68 337 aa12.84□□□□□ -0.35
ERCC1-203ENST00000340192 MOGAT1Q96PD6 335 aa12.84□□□□□ -0.35
ERCC1-203ENST00000340192 PIP5K1AQ99755 562 aa12.84□□□□□ -0.35
ERCC1-203ENST00000340192 ELAC2Q9BQ52 826 aaKnown RBP12.84□□□□□ -0.35
ERCC1-203ENST00000340192 TMEM43Q9BTV4 400 aa12.84□□□□□ -0.35
ERCC1-203ENST00000340192 AMBRA1Q9C0C7 1298 aa12.84□□□□□ -0.35
ERCC1-203ENST00000340192 FAM107BQ9H098 131 aa12.84□□□□□ -0.35
ERCC1-203ENST00000340192 B3GALT5Q9Y2C3 310 aa12.84□□□□□ -0.35
ERCC1-203ENST00000340192 SLC25A15Q9Y619 301 aa12.84□□□□□ -0.35
ERCC1-203ENST00000340192 ROS1P08922 2347 aa12.84□□□□□ -0.35
ERCC1-203ENST00000340192 SMPD2O60906 423 aa12.83□□□□□ -0.36
ERCC1-203ENST00000340192 LYPD3O95274 346 aa12.83□□□□□ -0.36
ERCC1-203ENST00000340192 THY1P04216 161 aa12.83□□□□□ -0.36
ERCC1-203ENST00000340192 CDH2P19022 906 aaPredicted RBP12.83□□□□□ -0.36
ERCC1-203ENST00000340192 CLDN17P56750 224 aa12.83□□□□□ -0.36
ERCC1-203ENST00000340192 IL1RL1Q01638 556 aa12.83□□□□□ -0.36
ERCC1-203ENST00000340192 TGFBR3Q03167 851 aa12.83□□□□□ -0.36
ERCC1-203ENST00000340192 LTBQ06643 244 aa12.83□□□□□ -0.36
ERCC1-203ENST00000340192 C1DQ13901 141 aaKnown RBP12.83□□□□□ -0.36
ERCC1-203ENST00000340192 MFSD13AQ14CX5 517 aa12.83□□□□□ -0.36
ERCC1-203ENST00000340192 ADAM5Q6NVV9 412 aa12.83□□□□□ -0.36
ERCC1-203ENST00000340192 WDR88Q6ZMY6 472 aa12.83□□□□□ -0.36
ERCC1-203ENST00000340192 ABHD12BQ7Z5M8 362 aaPredicted RBP12.83□□□□□ -0.36
ERCC1-203ENST00000340192 TREML1Q86YW5 311 aa12.83□□□□□ -0.36
ERCC1-203ENST00000340192 C10orf53Q8N6V4 93 aa12.83□□□□□ -0.36
ERCC1-203ENST00000340192 ZNF611Q8N823 705 aa12.83□□□□□ -0.36
ERCC1-203ENST00000340192 ADPRHL1Q8NDY3 354 aa12.83□□□□□ -0.36
ERCC1-203ENST00000340192 C1orf162Q8NEQ5 155 aaPredicted RBP12.83□□□□□ -0.36
ERCC1-203ENST00000340192 KBTBD8Q8NFY9 601 aa12.83□□□□□ -0.36
ERCC1-203ENST00000340192 OR2T12Q8NG77 320 aa12.83□□□□□ -0.36
ERCC1-203ENST00000340192 IGFBPL1Q8WX77 278 aa12.83□□□□□ -0.36
ERCC1-203ENST00000340192 PCDHAC1Q9H158 963 aa12.83□□□□□ -0.36
ERCC1-203ENST00000340192 CMTM6Q9NX76 183 aa12.83□□□□□ -0.36
ERCC1-203ENST00000340192 BAG5Q9UL15 447 aa12.83□□□□□ -0.36
ERCC1-203ENST00000340192 SLC7A7Q9UM01 511 aa12.83□□□□□ -0.36
ERCC1-203ENST00000340192 SH3GLB1Q9Y371 365 aa12.83□□□□□ -0.36
ERCC1-203ENST00000340192 CORINQ9Y5Q5 1042 aa12.83□□□□□ -0.36
ERCC1-203ENST00000340192 ELOVL7A1L3X0 281 aa12.82□□□□□ -0.36
ERCC1-203ENST00000340192 TRAPPC13A5PLN9 417 aa12.82□□□□□ -0.36
ERCC1-203ENST00000340192 OR6C65A6NJZ3 312 aa12.82□□□□□ -0.36
ERCC1-203ENST00000340192 ZNF587BE7ETH6 402 aa12.82□□□□□ -0.36
ERCC1-203ENST00000340192 LRRN3E7EW58 273 aa12.82□□□□□ -0.36
ERCC1-203ENST00000340192 MS4A18H0YCH9 400 aa12.82□□□□□ -0.36
ERCC1-203ENST00000340192 HPRP00739 348 aa12.82□□□□□ -0.36
ERCC1-203ENST00000340192 IFNA14P01570 189 aa12.82□□□□□ -0.36
ERCC1-203ENST00000340192 CD99P14209 185 aa12.82□□□□□ -0.36
ERCC1-203ENST00000340192 NQO1P15559 274 aaKnown RBP12.82□□□□□ -0.36
ERCC1-203ENST00000340192 TNFRSF1BP20333 461 aa12.82□□□□□ -0.36
ERCC1-203ENST00000340192 HOXC12P31275 282 aa12.82□□□□□ -0.36
ERCC1-203ENST00000340192 LSP1P33241 339 aa12.82□□□□□ -0.36
ERCC1-203ENST00000340192 ZNF83P51522 516 aa12.82□□□□□ -0.36
ERCC1-203ENST00000340192 GYS2P54840 703 aa12.82□□□□□ -0.36
ERCC1-203ENST00000340192 NKX6-1P78426 367 aaPredicted RBP12.82□□□□□ -0.36
ERCC1-203ENST00000340192 MS4A18Q3C1V0 323 aa12.82□□□□□ -0.36
ERCC1-203ENST00000340192 ZNF672Q499Z4 452 aaPredicted RBP12.82□□□□□ -0.36
ERCC1-203ENST00000340192 LINGO2Q7L985 606 aa12.82□□□□□ -0.36
ERCC1-203ENST00000340192 ARPINQ7Z6K5 226 aa12.82□□□□□ -0.36
ERCC1-203ENST00000340192 CARM1Q86X55 608 aa12.82□□□□□ -0.36
ERCC1-203ENST00000340192 KRTAP1-3Q8IUG1 177 aa12.82□□□□□ -0.36
ERCC1-203ENST00000340192 MICU2Q8IYU8 434 aa12.82□□□□□ -0.36
ERCC1-203ENST00000340192 C17orf78Q8N4C9 275 aa12.82□□□□□ -0.36
ERCC1-203ENST00000340192 SCAIQ8N9R8 606 aa12.82□□□□□ -0.36
ERCC1-203ENST00000340192 WDR31Q8NA23 367 aa12.82□□□□□ -0.36
ERCC1-203ENST00000340192 WFDC11Q8NEX6 87 aa12.82□□□□□ -0.36
ERCC1-203ENST00000340192 NEUROG1Q92886 237 aa12.82□□□□□ -0.36
ERCC1-203ENST00000340192 FBXW5Q969U6 566 aa12.82□□□□□ -0.36
ERCC1-203ENST00000340192 SLC41A3Q96GZ6 507 aa12.82□□□□□ -0.36
ERCC1-203ENST00000340192 ALKBH3Q96Q83 286 aaPredicted RBP12.82□□□□□ -0.36
ERCC1-203ENST00000340192 TMUB1Q9BVT8 246 aa12.82□□□□□ -0.36
ERCC1-203ENST00000340192 ASPNQ9BXN1 380 aa12.82□□□□□ -0.36
ERCC1-203ENST00000340192 EFCAB1Q9HAE3 211 aa12.82□□□□□ -0.36
ERCC1-203ENST00000340192 SLC17A5Q9NRA2 495 aa12.82□□□□□ -0.36
ERCC1-203ENST00000340192 RCE1Q9Y256 329 aa12.82□□□□□ -0.36
ERCC1-203ENST00000340192 LOC102725191A0A1B0GVB3 256 aa12.81□□□□□ -0.36
ERCC1-203ENST00000340192 ABCD4O14678 606 aa12.81□□□□□ -0.36
ERCC1-203ENST00000340192 UPK3AO75631 287 aa12.81□□□□□ -0.36
ERCC1-203ENST00000340192 ZNF432O94892 652 aa12.81□□□□□ -0.36
ERCC1-203ENST00000340192 MT-ATP6P00846 226 aa12.81□□□□□ -0.36
ERCC1-203ENST00000340192 HLA-DOBP13765 273 aa12.81□□□□□ -0.36
ERCC1-203ENST00000340192 DRD4P21917 467 aa12.81□□□□□ -0.36
ERCC1-203ENST00000340192 KDELR2P33947 212 aa12.81□□□□□ -0.36
ERCC1-203ENST00000340192 SLC25A3Q00325 362 aa12.81□□□□□ -0.36
ERCC1-203ENST00000340192 FOXD4Q12950 439 aaPredicted RBP12.81□□□□□ -0.36
ERCC1-203ENST00000340192 PMS2P3Q13401 168 aa12.81□□□□□ -0.36
ERCC1-203ENST00000340192 LRRC23Q53EV4 343 aaPredicted RBP12.81□□□□□ -0.36
ERCC1-203ENST00000340192 HIKESHIQ53FT3 197 aa12.81□□□□□ -0.36
ERCC1-203ENST00000340192 CYBRD1Q53TN4 286 aa12.81□□□□□ -0.36
ERCC1-203ENST00000340192 TTC33Q6PID6 262 aaPredicted RBP12.81□□□□□ -0.36
ERCC1-203ENST00000340192 KLHL17Q6TDP4 642 aa12.81□□□□□ -0.36
ERCC1-203ENST00000340192 TMEM108Q6UXF1 575 aa12.81□□□□□ -0.36
ERCC1-203ENST00000340192 UEVLDQ8IX04 471 aa12.81□□□□□ -0.36
ERCC1-203ENST00000340192 SLC15A3Q8IY34 581 aa12.81□□□□□ -0.36
ERCC1-203ENST00000340192 LRRC75A-AS1Q8N1F1 130 aa12.81□□□□□ -0.36
ERCC1-203ENST00000340192 TMEM171Q8WVE6 324 aa12.81□□□□□ -0.36
ERCC1-203ENST00000340192 C1QTNF6Q9BXI9 259 aa12.81□□□□□ -0.36
ERCC1-203ENST00000340192 LINC00470Q9BZP3 86 aa12.81□□□□□ -0.36
ERCC1-203ENST00000340192 MYLK2Q9H1R3 596 aa12.81□□□□□ -0.36
ERCC1-203ENST00000340192 MRPL39Q9NYK5 338 aaKnown RBP12.81□□□□□ -0.36
ERCC1-203ENST00000340192 GMPR2Q9P2T1 348 aaKnown RBP12.81□□□□□ -0.36
ERCC1-203ENST00000340192 AP3M1Q9Y2T2 418 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms