RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 DPY19L4Q7Z388 723 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 BEST4Q8NFU0 473 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 OR6F1Q8NGZ6 308 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 ZNF721Q8TF20 911 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 DUSP19Q8WTR2 217 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 CCDC74AQ96AQ1 378 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 ZDHHC12Q96GR4 267 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 ALG12Q9BV10 488 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 HOXD1Q9GZZ0 328 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 SLC22A4Q9H015 551 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 KCNN2Q9H2S1 579 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 AUNIPQ9H7T9 357 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 NOX4Q9NPH5 578 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 UBQLN4Q9NRR5 601 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 NCDNQ9UBB6 729 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 ST6GALNAC2Q9UJ37 374 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 ZNF221Q9UK13 617 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 BCAT2O15382 392 aaPredicted RBP8.05□□□□□ -1.12
SNCA-201ENST00000336904 NDUFB5O43674 189 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 MPZL1O95297 269 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 WNT11O96014 354 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 THBS2P35442 1172 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 MAP2K3P46734 347 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 SNRPD2P62316 118 aaKnown RBP8.05□□□□□ -1.12
SNCA-201ENST00000336904 HSD11B2P80365 405 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 DGCR2P98153 550 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 PLA2G7Q13093 441 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 TATDN3Q17R31 274 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 CCDC157Q569K6 752 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 HLA-DQA1Q5Y7H0 255 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 LINC00114Q6XXX2 140 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 JAZF1Q86VZ6 243 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 TOR1AIP2Q8NFQ8 470 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 THEM6Q8WUY1 208 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 DACT3Q96B18 629 aaPredicted RBP8.05□□□□□ -1.12
SNCA-201ENST00000336904 TBL1XR1Q9BZK7 514 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 ZNF304Q9HCX3 659 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 NKIRAS2Q9NYR9 191 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 MYEF2Q9P2K5 600 aaKnown RBP8.05□□□□□ -1.12
SNCA-201ENST00000336904 TRAPPC4Q9Y296 219 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 A0A0G2JK05 382 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 H0YC42 278 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 LYRM1O43325 122 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 HLA-DOBP13765 273 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 GPR143P51810 404 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 FBXW4P57775 412 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 IFITM2Q01629 132 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 ZNF74Q16587 644 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 MESTQ5EB52 335 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 C6orf183Q5T699 404 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 PLET1Q6UQ28 207 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 NANOGNBQ7Z5D8 188 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 OR6V1Q8N148 313 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 ZNF671Q8TAW3 534 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 ST6GAL2Q96JF0 529 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 LCORQ96JN0 433 aaPredicted RBP8.05□□□□□ -1.12
SNCA-201ENST00000336904 TSPAN32Q96QS1 320 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.05□□□□□ -1.12
SNCA-201ENST00000336904 MMP25Q9NPA2 562 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 ALG5Q9Y673 324 aa8.05□□□□□ -1.12
SNCA-201ENST00000336904 H3BML4 177 aa8.04□□□□□ -1.12
SNCA-201ENST00000336904 ALOX12BO75342 701 aa8.04□□□□□ -1.12
SNCA-201ENST00000336904 AKR7A3O95154 331 aa8.04□□□□□ -1.12
SNCA-201ENST00000336904 ZFPL1O95159 310 aa8.04□□□□□ -1.12
SNCA-201ENST00000336904 RAB3BP20337 219 aa8.04□□□□□ -1.12
SNCA-201ENST00000336904 ABCD3P28288 659 aa8.04□□□□□ -1.12
SNCA-201ENST00000336904 RORAP35398 523 aa8.04□□□□□ -1.12
SNCA-201ENST00000336904 DDOSTP39656 456 aa8.04□□□□□ -1.12
SNCA-201ENST00000336904 CCR6P51684 374 aa8.04□□□□□ -1.12
SNCA-201ENST00000336904 RPS11P62280 158 aaKnown RBP eCLIP8.04□□□□□ -1.12
SNCA-201ENST00000336904 RPS15P62841 145 aaKnown RBP8.04□□□□□ -1.12
SNCA-201ENST00000336904 SIRPAP78324 504 aa8.04□□□□□ -1.12
SNCA-201ENST00000336904 IGLV3-21P80748 117 aaPredicted RBP8.04□□□□□ -1.12
SNCA-201ENST00000336904 C19orf57Q0VDD7 668 aa8.04□□□□□ -1.12
SNCA-201ENST00000336904 EBPQ15125 230 aaKnown RBP8.04□□□□□ -1.12
SNCA-201ENST00000336904 QPRTQ15274 297 aa8.04□□□□□ -1.12
SNCA-201ENST00000336904 KIF26BQ2KJY2 2108 aa8.04□□□□□ -1.12
SNCA-201ENST00000336904 DMRTC1Q5HYR2 192 aa8.04□□□□□ -1.12
SNCA-201ENST00000336904 CEP78Q5JTW2 689 aa8.04□□□□□ -1.12
SNCA-201ENST00000336904 LCN10Q6JVE6 187 aa8.04□□□□□ -1.12
SNCA-201ENST00000336904 FAM199XQ6PEV8 388 aaPredicted RBP8.04□□□□□ -1.12
SNCA-201ENST00000336904 ATG4DQ86TL0 474 aaPredicted RBP8.04□□□□□ -1.12
SNCA-201ENST00000336904 GRAMD2AQ8IUY3 354 aa8.04□□□□□ -1.12
SNCA-201ENST00000336904 WDFY1Q8IWB7 410 aa8.04□□□□□ -1.12
SNCA-201ENST00000336904 YIPF7Q8N8F6 280 aa8.04□□□□□ -1.12
SNCA-201ENST00000336904 C1orf216Q8TAB5 229 aa8.04□□□□□ -1.12
SNCA-201ENST00000336904 LGALS14Q8TCE9 139 aa8.04□□□□□ -1.12
SNCA-201ENST00000336904 RGP1Q92546 391 aaPredicted RBP8.04□□□□□ -1.12
SNCA-201ENST00000336904 OMA1Q96E52 524 aa8.04□□□□□ -1.12
SNCA-201ENST00000336904 ADAD1Q96M93 576 aaKnown RBP8.04□□□□□ -1.12
SNCA-201ENST00000336904 MED18Q9BUE0 208 aa8.04□□□□□ -1.12
SNCA-201ENST00000336904 SMOC1Q9H4F8 434 aa8.04□□□□□ -1.12
SNCA-201ENST00000336904 SLC22A11Q9NSA0 550 aa8.04□□□□□ -1.12
SNCA-201ENST00000336904 PAQR5Q9NXK6 330 aaPredicted RBP8.04□□□□□ -1.12
SNCA-201ENST00000336904 ZNF337Q9Y3M9 751 aa8.04□□□□□ -1.12
SNCA-201ENST00000336904 PCDHGB2Q9Y5G2 931 aa8.04□□□□□ -1.12
SNCA-201ENST00000336904 TEX51A0A1B0GUA7 166 aa8.04□□□□□ -1.12
SNCA-201ENST00000336904 LILRA5A6NI73 299 aa8.04□□□□□ -1.12
SNCA-201ENST00000336904 PATE3B3GLJ2 98 aa8.04□□□□□ -1.12
SNCA-201ENST00000336904 PIN1P1O15428 100 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms