RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 MAP2K6P52564 334 aa13.69□□□□□ -0.22
PRPF3-201ENST00000324862 ISL1P61371 349 aa13.69□□□□□ -0.22
PRPF3-201ENST00000324862 CD47Q08722 323 aa13.69□□□□□ -0.22
PRPF3-201ENST00000324862 SMN1Q16637 294 aaKnown RBP13.69□□□□□ -0.22
PRPF3-201ENST00000324862 MS4A18Q3C1V0 323 aa13.69□□□□□ -0.22
PRPF3-201ENST00000324862 HIST3H2AQ7L7L0 130 aa13.69□□□□□ -0.22
PRPF3-201ENST00000324862 CISD2Q8N5K1 135 aaKnown RBP13.69□□□□□ -0.22
PRPF3-201ENST00000324862 CLDN22Q8N7P3 220 aa13.69□□□□□ -0.22
PRPF3-201ENST00000324862 OSTF1Q92882 214 aa13.69□□□□□ -0.22
PRPF3-201ENST00000324862 HIST1H2ACQ93077 130 aa13.69□□□□□ -0.22
PRPF3-201ENST00000324862 TIMP4Q99727 224 aa13.69□□□□□ -0.22
PRPF3-201ENST00000324862 ZNF226Q9NYT6 803 aa13.69□□□□□ -0.22
PRPF3-201ENST00000324862 RNF6Q9Y252 685 aa13.69□□□□□ -0.22
PRPF3-201ENST00000324862 HDGFL3Q9Y3E1 203 aa13.69□□□□□ -0.22
PRPF3-201ENST00000324862 PCDHGB7Q9Y5F8 929 aa13.69□□□□□ -0.22
PRPF3-201ENST00000324862 IER3IP1Q9Y5U9 82 aa13.69□□□□□ -0.22
PRPF3-201ENST00000324862 SMNDC1O75940 238 aaKnown RBP eCLIP13.68□□□□□ -0.22
PRPF3-201ENST00000324862 RCBTB2O95199 551 aa13.68□□□□□ -0.22
PRPF3-201ENST00000324862 ACADSP16219 412 aa13.68□□□□□ -0.22
PRPF3-201ENST00000324862 ZNF708P17019 499 aa13.68□□□□□ -0.22
PRPF3-201ENST00000324862 GTF2E2P29084 291 aaKnown RBP13.68□□□□□ -0.22
PRPF3-201ENST00000324862 MED21Q13503 144 aa13.68□□□□□ -0.22
PRPF3-201ENST00000324862 SGCBQ16585 318 aa13.68□□□□□ -0.22
PRPF3-201ENST00000324862 SLX4IPQ5VYV7 408 aa13.68□□□□□ -0.22
PRPF3-201ENST00000324862 HBMQ6B0K9 141 aa13.68□□□□□ -0.22
PRPF3-201ENST00000324862 LAIR2Q6ISS4 152 aa13.68□□□□□ -0.22
PRPF3-201ENST00000324862 GPAT4Q86UL3 456 aa13.68□□□□□ -0.22
PRPF3-201ENST00000324862 OR2T33Q8NG76 320 aa13.68□□□□□ -0.22
PRPF3-201ENST00000324862 ROBO4Q8WZ75 1007 aa13.68□□□□□ -0.22
PRPF3-201ENST00000324862 ZNF775Q96BV0 537 aaPredicted RBP13.68□□□□□ -0.22
PRPF3-201ENST00000324862 RASD2Q96D21 266 aa13.68□□□□□ -0.22
PRPF3-201ENST00000324862 QPCTLQ9NXS2 382 aa13.68□□□□□ -0.22
PRPF3-201ENST00000324862 ALKBH4Q9NXW9 302 aa13.68□□□□□ -0.22
PRPF3-201ENST00000324862 FAM183AA6NL82 134 aa13.68□□□□□ -0.22
PRPF3-201ENST00000324862 KDM4EB2RXH2 506 aaPredicted RBP13.68□□□□□ -0.22
PRPF3-201ENST00000324862 RNF13O43567 381 aa13.68□□□□□ -0.22
PRPF3-201ENST00000324862 TSPAN19P0C672 248 aa13.68□□□□□ -0.22
PRPF3-201ENST00000324862 MYF6P23409 242 aa13.68□□□□□ -0.22
PRPF3-201ENST00000324862 CTXN1P60606 82 aa13.68□□□□□ -0.22
PRPF3-201ENST00000324862 MYBPC1Q00872 1141 aa13.68□□□□□ -0.22
PRPF3-201ENST00000324862 KEAP1Q14145 624 aa13.68□□□□□ -0.22
PRPF3-201ENST00000324862 PDK3Q15120 406 aa13.68□□□□□ -0.22
PRPF3-201ENST00000324862 PGGHGQ32M88 737 aa13.68□□□□□ -0.22
PRPF3-201ENST00000324862 C12orf73Q69YU5 71 aa13.68□□□□□ -0.22
PRPF3-201ENST00000324862 VASNQ6EMK4 673 aa13.68□□□□□ -0.22
PRPF3-201ENST00000324862 C5orf46Q6UWT4 87 aa13.68□□□□□ -0.22
PRPF3-201ENST00000324862 TCEANCQ8N8B7 351 aa13.68□□□□□ -0.22
PRPF3-201ENST00000324862 OR52L1Q8NGH7 329 aa13.68□□□□□ -0.22
PRPF3-201ENST00000324862 ZPLD1Q8TCW7 415 aa13.68□□□□□ -0.22
PRPF3-201ENST00000324862 APH1BQ8WW43 257 aa13.68□□□□□ -0.22
PRPF3-201ENST00000324862 Q96M85 177 aa13.68□□□□□ -0.22
PRPF3-201ENST00000324862 ERMAPQ96PL5 475 aaPredicted RBP13.68□□□□□ -0.22
PRPF3-201ENST00000324862 ASPNQ9BXN1 380 aa13.68□□□□□ -0.22
PRPF3-201ENST00000324862 MRPL39Q9NYK5 338 aaKnown RBP13.68□□□□□ -0.22
PRPF3-201ENST00000324862 B3GAT1Q9P2W7 334 aa13.68□□□□□ -0.22
PRPF3-201ENST00000324862 A0A1B0GTH9 108 aa13.67□□□□□ -0.22
PRPF3-201ENST00000324862 NPIPA2E9PIF3 369 aa13.67□□□□□ -0.22
PRPF3-201ENST00000324862 NPIPA3F8WFD2 350 aa13.67□□□□□ -0.22
PRPF3-201ENST00000324862 CARD18P57730 90 aa13.67□□□□□ -0.22
PRPF3-201ENST00000324862 FOXK2Q01167 660 aa13.67□□□□□ -0.22
PRPF3-201ENST00000324862 MELKQ14680 651 aa13.67□□□□□ -0.22
PRPF3-201ENST00000324862 ZNF362Q5T0B9 420 aaPredicted RBP13.67□□□□□ -0.22
PRPF3-201ENST00000324862 PCSK4Q6UW60 755 aa13.67□□□□□ -0.22
PRPF3-201ENST00000324862 H1FNTQ75WM6 255 aaPredicted RBP13.67□□□□□ -0.22
PRPF3-201ENST00000324862 C8orf59Q8N0T1 100 aaPredicted RBP13.67□□□□□ -0.22
PRPF3-201ENST00000324862 CYB561A3Q8NBI2 242 aa13.67□□□□□ -0.22
PRPF3-201ENST00000324862 PNPLA2Q96AD5 504 aa13.67□□□□□ -0.22
PRPF3-201ENST00000324862 RHNO1Q9BSD3 238 aa13.67□□□□□ -0.22
PRPF3-201ENST00000324862 AMBNQ9NP70 447 aa13.67□□□□□ -0.22
PRPF3-201ENST00000324862 CHST11Q9NPF2 352 aa13.67□□□□□ -0.22
PRPF3-201ENST00000324862 MED29Q9NX70 200 aa13.67□□□□□ -0.22
PRPF3-201ENST00000324862 H7C1C5 153 aa13.66□□□□□ -0.22
PRPF3-201ENST00000324862 TLX2O43763 284 aaPredicted RBP13.66□□□□□ -0.22
PRPF3-201ENST00000324862 RPSAP08865 295 aaKnown RBP13.66□□□□□ -0.22
PRPF3-201ENST00000324862 HIST1H1CP16403 213 aaKnown RBP13.66□□□□□ -0.22
PRPF3-201ENST00000324862 SMSP52788 366 aa13.66□□□□□ -0.22
PRPF3-201ENST00000324862 LCN6P62502 163 aa13.66□□□□□ -0.22
PRPF3-201ENST00000324862 SNAPC1Q16533 368 aa13.66□□□□□ -0.22
PRPF3-201ENST00000324862 ESPNLQ6ZVH7 1005 aa13.66□□□□□ -0.22
PRPF3-201ENST00000324862 OR4K13Q8NH42 304 aa13.66□□□□□ -0.22
PRPF3-201ENST00000324862 OR2V1Q8NHB1 315 aa13.66□□□□□ -0.22
PRPF3-201ENST00000324862 TXNDC15Q96J42 360 aa13.66□□□□□ -0.22
PRPF3-201ENST00000324862 TSPAN32Q96QS1 320 aa13.66□□□□□ -0.22
PRPF3-201ENST00000324862 MED20Q9H944 212 aa13.66□□□□□ -0.22
PRPF3-201ENST00000324862 NRIP3Q9NQ35 241 aa13.66□□□□□ -0.22
PRPF3-201ENST00000324862 LRCH1Q9Y2L9 728 aa13.66□□□□□ -0.22
PRPF3-201ENST00000324862 EPG5Q9HCE0 2579 aa13.66□□□□□ -0.22
PRPF3-201ENST00000324862 TEX13CA0A0J9YWL9 993 aa13.66□□□□□ -0.22
PRPF3-201ENST00000324862 SMAD9O15198 467 aaKnown RBP13.66□□□□□ -0.22
PRPF3-201ENST00000324862 OR6A2O95222 327 aa13.66□□□□□ -0.22
PRPF3-201ENST00000324862 PMS2P2O95744 297 aa13.66□□□□□ -0.22
PRPF3-201ENST00000324862 IGHG3P01860 377 aa13.66□□□□□ -0.22
PRPF3-201ENST00000324862 NOS3P29474 1203 aa13.66□□□□□ -0.22
PRPF3-201ENST00000324862 FMO3P31513 532 aa13.66□□□□□ -0.22
PRPF3-201ENST00000324862 SLC6A6P31641 620 aa13.66□□□□□ -0.22
PRPF3-201ENST00000324862 CLK1P49759 484 aaKnown RBP13.66□□□□□ -0.22
PRPF3-201ENST00000324862 PRPS1P60891 318 aa13.66□□□□□ -0.22
PRPF3-201ENST00000324862 H3F3AP84243 136 aa13.66□□□□□ -0.22
PRPF3-201ENST00000324862 POU3F1Q03052 451 aaPredicted RBP13.66□□□□□ -0.22
PRPF3-201ENST00000324862 RUNX1T1Q06455 604 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms