RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 OR1S2Q8NGQ3 325 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 LRIG1Q96JA1 1093 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 ADOQ96SZ5 270 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 TM7SF3Q9NS93 570 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 ANKRD31Q8N7Z5 1873 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 RIMBP3CA6NJZ7 1639 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 RIMBP3BA6NNM3 1639 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 RIMBP3Q9UFD9 1639 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 PHYHO14832 338 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 DFFBO76075 338 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 SPNP16150 400 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 PAX6P26367 422 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 CXCR4P61073 352 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 LRRC26Q2I0M4 334 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 KCTD11Q693B1 232 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 SLC35D2Q76EJ3 337 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 TMEM200AQ86VY9 491 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 LRRC28Q86X40 367 aaPredicted RBP7.37□□□□□ -1.23
CIITA-201ENST00000324288 ABHD4Q8TB40 342 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 LINC00597Q9H2U6 94 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 VAPAQ9P0L0 249 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 ZNF840PA6NDX5 716 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 DCTN6O00399 190 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 THBS3P49746 956 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 SELENOWP63302 87 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 TMEM71Q6P5X7 295 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 TMEM182Q6ZP80 229 aaPredicted RBP7.37□□□□□ -1.23
CIITA-201ENST00000324288 DMBX1Q8NFW5 382 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 OR2G3Q8NGZ4 309 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 NTPCRQ9BSD7 190 aaKnown RBP7.37□□□□□ -1.23
CIITA-201ENST00000324288 SELENOIQ9C0D9 397 aa7.37□□□□□ -1.23
CIITA-201ENST00000324288 UMAD1C9J7I0 102 aa7.36□□□□□ -1.23
CIITA-201ENST00000324288 TGM5O43548 720 aa7.36□□□□□ -1.23
CIITA-201ENST00000324288 OR10J4P0C629 311 aa7.36□□□□□ -1.23
CIITA-201ENST00000324288 CSNK1A1P48729 337 aa7.36□□□□□ -1.23
CIITA-201ENST00000324288 SPINT3P49223 89 aa7.36□□□□□ -1.23
CIITA-201ENST00000324288 BAXQ07812 192 aa7.36□□□□□ -1.23
CIITA-201ENST00000324288 EIF4HQ15056 248 aaKnown RBP7.36□□□□□ -1.23
CIITA-201ENST00000324288 ACTBL2Q562R1 376 aa7.36□□□□□ -1.23
CIITA-201ENST00000324288 ZNF789Q5FWF6 425 aa7.36□□□□□ -1.23
CIITA-201ENST00000324288 BCDIN3DQ7Z5W3 292 aaKnown RBP7.36□□□□□ -1.23
CIITA-201ENST00000324288 PLXDC1Q8IUK5 500 aa7.36□□□□□ -1.23
CIITA-201ENST00000324288 ZNRF4Q8WWF5 429 aa7.36□□□□□ -1.23
CIITA-201ENST00000324288 CPNE4Q96A23 557 aaPredicted RBP7.36□□□□□ -1.23
CIITA-201ENST00000324288 C3orf30Q96M34 536 aa7.36□□□□□ -1.23
CIITA-201ENST00000324288 DDOQ99489 341 aa7.36□□□□□ -1.23
CIITA-201ENST00000324288 POPDC3Q9HBV1 291 aa7.36□□□□□ -1.23
CIITA-201ENST00000324288 PLEK2Q9NYT0 353 aa7.36□□□□□ -1.23
CIITA-201ENST00000324288 BTNL2Q9UIR0 455 aa7.36□□□□□ -1.23
CIITA-201ENST00000324288 BCL9LQ86UU0 1499 aa7.36□□□□□ -1.23
CIITA-201ENST00000324288 TGFBR1P36897 503 aa7.36□□□□□ -1.23
CIITA-201ENST00000324288 TOR2AQ5JU69 321 aa7.36□□□□□ -1.23
CIITA-201ENST00000324288 TMEM31Q5JXX7 168 aa7.36□□□□□ -1.23
CIITA-201ENST00000324288 CADM3Q8N126 398 aa7.36□□□□□ -1.23
CIITA-201ENST00000324288 HCFC1R1Q9NWW0 138 aa7.36□□□□□ -1.23
CIITA-201ENST00000324288 SPO11Q9Y5K1 396 aa7.36□□□□□ -1.23
CIITA-201ENST00000324288 AKR7A2O43488 359 aa7.36□□□□□ -1.23
CIITA-201ENST00000324288 GPR32O75388 356 aa7.36□□□□□ -1.23
CIITA-201ENST00000324288 GLI4P10075 376 aa7.36□□□□□ -1.23
CIITA-201ENST00000324288 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.36□□□□□ -1.23
CIITA-201ENST00000324288 PTDSS2Q9BVG9 487 aa7.36□□□□□ -1.23
CIITA-201ENST00000324288 FBXL4Q9UKA2 621 aa7.36□□□□□ -1.23
CIITA-201ENST00000324288 GJB3O75712 270 aa7.36□□□□□ -1.23
CIITA-201ENST00000324288 ARL16Q0P5N6 197 aa7.36□□□□□ -1.23
CIITA-201ENST00000324288 SMIM14Q96QK8 99 aa7.36□□□□□ -1.23
CIITA-201ENST00000324288 C12orf10Q9HB07 376 aa7.36□□□□□ -1.23
CIITA-201ENST00000324288 MYOM1P52179 1685 aa7.36□□□□□ -1.23
CIITA-201ENST00000324288 RGPD5Q99666 1765 aa7.36□□□□□ -1.23
CIITA-201ENST00000324288 SLIT3O75094 1523 aa7.36□□□□□ -1.23
CIITA-201ENST00000324288 TRBV4-1A0A0J9YWV2 114 aa7.36□□□□□ -1.23
CIITA-201ENST00000324288 HSD17B6O14756 317 aa7.36□□□□□ -1.23
CIITA-201ENST00000324288 GPR137BO60478 399 aa7.36□□□□□ -1.23
CIITA-201ENST00000324288 YOD1Q5VVQ6 348 aaPredicted RBP7.36□□□□□ -1.23
CIITA-201ENST00000324288 PRICKLE2Q7Z3G6 844 aa7.36□□□□□ -1.23
CIITA-201ENST00000324288 PLSCR3Q9NRY6 295 aa7.36□□□□□ -1.23
CIITA-201ENST00000324288 A0A0B4J203 849 aa7.36□□□□□ -1.23
CIITA-201ENST00000324288 SEC14L6B5MCN3 397 aa7.36□□□□□ -1.23
CIITA-201ENST00000324288 PSMB5P28074 263 aa7.36□□□□□ -1.23
CIITA-201ENST00000324288 INCA1Q0VD86 236 aa7.36□□□□□ -1.23
CIITA-201ENST00000324288 KIAA0907Q7Z7F0 614 aaPredicted RBP7.36□□□□□ -1.23
CIITA-201ENST00000324288 OR2T27Q8NH04 317 aa7.36□□□□□ -1.23
CIITA-201ENST00000324288 SGPP1Q9BX95 441 aa7.36□□□□□ -1.23
CIITA-201ENST00000324288 CLCF1Q9UBD9 225 aa7.36□□□□□ -1.23
CIITA-201ENST00000324288 GLAP06280 429 aa7.36□□□□□ -1.23
CIITA-201ENST00000324288 MPC1LP0DKB6 136 aa7.36□□□□□ -1.23
CIITA-201ENST00000324288 ELK1P19419 428 aa7.36□□□□□ -1.23
CIITA-201ENST00000324288 UBE2MP61081 183 aaKnown RBP7.36□□□□□ -1.23
CIITA-201ENST00000324288 SIRPAP78324 504 aa7.36□□□□□ -1.23
CIITA-201ENST00000324288 GDPGP1Q6ZNW5 385 aa7.36□□□□□ -1.23
CIITA-201ENST00000324288 NLRC3Q7RTR2 1065 aa7.36□□□□□ -1.23
CIITA-201ENST00000324288 ZNF440Q8IYI8 595 aa7.36□□□□□ -1.23
CIITA-201ENST00000324288 OR6V1Q8N148 313 aa7.36□□□□□ -1.23
CIITA-201ENST00000324288 A0A087WV62 115 aa7.36□□□□□ -1.23
CIITA-201ENST00000324288 SLC9B1P1A6NJY1 282 aa7.36□□□□□ -1.23
CIITA-201ENST00000324288 AQP7P3A6NL99 342 aa7.36□□□□□ -1.23
CIITA-201ENST00000324288 TGM1P22735 817 aa7.36□□□□□ -1.23
CIITA-201ENST00000324288 PRDX3P30048 256 aaKnown RBP7.36□□□□□ -1.23
CIITA-201ENST00000324288 DAP3P51398 398 aaKnown RBP7.36□□□□□ -1.23
CIITA-201ENST00000324288 ZNF91Q05481 1191 aa7.36□□□□□ -1.23
CIITA-201ENST00000324288 CDKN3Q16667 212 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms