RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 FAM234AQ9H0X4 552 aa12.45□□□□□ -0.42
RFFL-201ENST00000315249 PPM1DO15297 605 aa12.45□□□□□ -0.42
RFFL-201ENST00000315249 LRRTM2O43300 516 aa12.45□□□□□ -0.42
RFFL-201ENST00000315249 PAHP00439 452 aa12.45□□□□□ -0.42
RFFL-201ENST00000315249 CR2P20023 1033 aa12.45□□□□□ -0.42
RFFL-201ENST00000315249 B3GLCTQ6Y288 498 aa12.45□□□□□ -0.42
RFFL-201ENST00000315249 SPRED2Q7Z698 418 aa12.45□□□□□ -0.42
RFFL-201ENST00000315249 KMT5CQ86Y97 462 aa12.45□□□□□ -0.42
RFFL-201ENST00000315249 RNF113BQ8IZP6 322 aaKnown RBP12.45□□□□□ -0.42
RFFL-201ENST00000315249 GLYATL2Q8WU03 294 aa12.45□□□□□ -0.42
RFFL-201ENST00000315249 EGLN1Q9GZT9 426 aa12.45□□□□□ -0.42
RFFL-201ENST00000315249 OR2S2Q9NQN1 319 aa12.45□□□□□ -0.42
RFFL-201ENST00000315249 USP22Q9UPT9 525 aa12.45□□□□□ -0.42
RFFL-201ENST00000315249 MAGED1Q9Y5V3 778 aaPredicted RBP12.45□□□□□ -0.42
RFFL-201ENST00000315249 OR6C76A6NM76 312 aa12.45□□□□□ -0.42
RFFL-201ENST00000315249 SURF4O15260 269 aa12.45□□□□□ -0.42
RFFL-201ENST00000315249 GCAP28676 217 aa12.45□□□□□ -0.42
RFFL-201ENST00000315249 MFAP5Q13361 173 aa12.45□□□□□ -0.42
RFFL-201ENST00000315249 C1orf140Q5VVS0 124 aa12.45□□□□□ -0.42
RFFL-201ENST00000315249 ZNF836Q6ZNA1 936 aa12.45□□□□□ -0.42
RFFL-201ENST00000315249 ASB17Q8WXJ9 295 aa12.45□□□□□ -0.42
RFFL-201ENST00000315249 CNOT9Q92600 299 aaKnown RBP12.45□□□□□ -0.42
RFFL-201ENST00000315249 OR8G3PP0DMU2 310 aa12.44□□□□□ -0.42
RFFL-201ENST00000315249 ESPNLQ6ZVH7 1005 aa12.44□□□□□ -0.42
RFFL-201ENST00000315249 COX15Q7KZN9 410 aa12.44□□□□□ -0.42
RFFL-201ENST00000315249 NMNAT3Q96T66 252 aa12.44□□□□□ -0.42
RFFL-201ENST00000315249 CTSFQ9UBX1 484 aa12.44□□□□□ -0.42
RFFL-201ENST00000315249 TP53TG5Q9Y2B4 290 aa12.44□□□□□ -0.42
RFFL-201ENST00000315249 SERPINE2P07093 398 aa12.44□□□□□ -0.42
RFFL-201ENST00000315249 GRINAQ7Z429 371 aa12.44□□□□□ -0.42
RFFL-201ENST00000315249 BCORP1Q8N888 145 aa12.44□□□□□ -0.42
RFFL-201ENST00000315249 ABHD4Q8TB40 342 aa12.44□□□□□ -0.42
RFFL-201ENST00000315249 MIB2Q96AX9 1013 aa12.44□□□□□ -0.42
RFFL-201ENST00000315249 ISOC1Q96CN7 298 aa12.44□□□□□ -0.42
RFFL-201ENST00000315249 ALG12Q9BV10 488 aa12.44□□□□□ -0.42
RFFL-201ENST00000315249 CRLF2Q9HC73 371 aa12.44□□□□□ -0.42
RFFL-201ENST00000315249 HSPE1-MOB4S4R3N1 261 aa12.44□□□□□ -0.42
RFFL-201ENST00000315249 SBF2Q86WG5 1849 aa12.44□□□□□ -0.42
RFFL-201ENST00000315249 A0A096LPE4 126 aa12.44□□□□□ -0.42
RFFL-201ENST00000315249 A0A1W2PPZ6 126 aa12.44□□□□□ -0.42
RFFL-201ENST00000315249 DENRO43583 198 aaKnown RBP12.44□□□□□ -0.42
RFFL-201ENST00000315249 GASTP01350 101 aa12.44□□□□□ -0.42
RFFL-201ENST00000315249 PRTGQ2VWP7 1150 aa12.44□□□□□ -0.42
RFFL-201ENST00000315249 PROX2Q3B8N5 592 aa12.44□□□□□ -0.42
RFFL-201ENST00000315249 PCGF3Q3KNV8 242 aa12.44□□□□□ -0.42
RFFL-201ENST00000315249 NPSR1Q6W5P4 371 aa12.44□□□□□ -0.42
RFFL-201ENST00000315249 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.44□□□□□ -0.42
RFFL-201ENST00000315249 ASB12Q8WXK4 309 aa12.44□□□□□ -0.42
RFFL-201ENST00000315249 TIMD4Q96H15 378 aa12.44□□□□□ -0.42
RFFL-201ENST00000315249 CHRNA9Q9UGM1 479 aa12.44□□□□□ -0.42
RFFL-201ENST00000315249 ZNF891A8MT65 544 aaPredicted RBP12.44□□□□□ -0.42
RFFL-201ENST00000315249 M0R036 132 aa12.44□□□□□ -0.42
RFFL-201ENST00000315249 ARNTP27540 789 aa12.44□□□□□ -0.42
RFFL-201ENST00000315249 GNB2P62879 340 aa12.44□□□□□ -0.42
RFFL-201ENST00000315249 C9orf152Q5JTZ5 239 aa12.44□□□□□ -0.42
RFFL-201ENST00000315249 SFRP4Q6FHJ7 346 aaPredicted RBP12.44□□□□□ -0.42
RFFL-201ENST00000315249 ZNF554Q86TJ5 538 aa12.44□□□□□ -0.42
RFFL-201ENST00000315249 PM20D2Q8IYS1 436 aa12.44□□□□□ -0.42
RFFL-201ENST00000315249 OR5D18Q8NGL1 313 aa12.44□□□□□ -0.42
RFFL-201ENST00000315249 SEMA4CQ9C0C4 833 aa12.44□□□□□ -0.42
RFFL-201ENST00000315249 PLEKHA3Q9HB20 300 aa12.44□□□□□ -0.42
RFFL-201ENST00000315249 FBXO4Q9UKT5 387 aa12.44□□□□□ -0.42
RFFL-201ENST00000315249 QSER1Q2KHR3 1735 aa12.44□□□□□ -0.42
RFFL-201ENST00000315249 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.44□□□□□ -0.42
RFFL-201ENST00000315249 H7C2Y5 167 aa12.44□□□□□ -0.42
RFFL-201ENST00000315249 GFYI3L273 518 aa12.44□□□□□ -0.42
RFFL-201ENST00000315249 TNFSF12O43508 249 aa12.44□□□□□ -0.42
RFFL-201ENST00000315249 ICOSLGO75144 302 aa12.44□□□□□ -0.42
RFFL-201ENST00000315249 PRSS3P35030 304 aa12.44□□□□□ -0.42
RFFL-201ENST00000315249 CDK5R2Q13319 367 aa12.44□□□□□ -0.42
RFFL-201ENST00000315249 Q6ZSR9 355 aa12.44□□□□□ -0.42
RFFL-201ENST00000315249 MORN4Q8NDC4 146 aa12.44□□□□□ -0.42
RFFL-201ENST00000315249 C11orf40Q8WZ69 217 aa12.44□□□□□ -0.42
RFFL-201ENST00000315249 DVL2O14641 736 aa12.43□□□□□ -0.42
RFFL-201ENST00000315249 TNFSF14O43557 240 aa12.43□□□□□ -0.42
RFFL-201ENST00000315249 C7P10643 843 aa12.43□□□□□ -0.42
RFFL-201ENST00000315249 LCN1P31025 176 aa12.43□□□□□ -0.42
RFFL-201ENST00000315249 EDDM3AQ14507 147 aa12.43□□□□□ -0.42
RFFL-201ENST00000315249 MTFR2Q6P444 385 aa12.43□□□□□ -0.42
RFFL-201ENST00000315249 H1FNTQ75WM6 255 aaPredicted RBP12.43□□□□□ -0.42
RFFL-201ENST00000315249 PCED1AQ9H1Q7 454 aa12.43□□□□□ -0.42
RFFL-201ENST00000315249 POMT2Q9UKY4 750 aa12.43□□□□□ -0.42
RFFL-201ENST00000315249 CRYABP02511 175 aaKnown RBP12.43□□□□□ -0.42
RFFL-201ENST00000315249 CD22P20273 847 aa12.43□□□□□ -0.42
RFFL-201ENST00000315249 IHHQ14623 411 aa12.43□□□□□ -0.42
RFFL-201ENST00000315249 TPRA1Q86W33 373 aa12.43□□□□□ -0.42
RFFL-201ENST00000315249 BOD1Q96IK1 185 aa12.43□□□□□ -0.42
RFFL-201ENST00000315249 DCLRE1CQ96SD1 692 aaKnown RBP12.43□□□□□ -0.42
RFFL-201ENST00000315249 TUBA1CQ9BQE3 449 aa12.43□□□□□ -0.42
RFFL-201ENST00000315249 CORINQ9Y5Q5 1042 aa12.43□□□□□ -0.42
RFFL-201ENST00000315249 SLC22A7Q9Y694 548 aa12.43□□□□□ -0.42
RFFL-201ENST00000315249 A8MV72 311 aaPredicted RBP12.43□□□□□ -0.42
RFFL-201ENST00000315249 SHOXO15266 292 aa12.43□□□□□ -0.42
RFFL-201ENST00000315249 BCKDHBP21953 392 aa12.43□□□□□ -0.42
RFFL-201ENST00000315249 STT3AP46977 705 aa12.43□□□□□ -0.42
RFFL-201ENST00000315249 ACTBP60709 375 aa12.43□□□□□ -0.42
RFFL-201ENST00000315249 ACTG1P63261 375 aa12.43□□□□□ -0.42
RFFL-201ENST00000315249 MAB21L1Q13394 359 aa12.43□□□□□ -0.42
RFFL-201ENST00000315249 MBOAT2Q6ZWT7 520 aa12.43□□□□□ -0.42
RFFL-201ENST00000315249 BATF2Q8N1L9 274 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 185.2 ms