RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 KIR3DX1Q9H7L2 352 aa12.32□□□□□ -0.44
SKA3-202ENST00000314759 V9GY05 133 aa12.32□□□□□ -0.44
SKA3-202ENST00000314759 TP53BP1Q12888 1972 aaPredicted RBP12.31□□□□□ -0.44
SKA3-202ENST00000314759 GNB5O14775 395 aa12.31□□□□□ -0.44
SKA3-202ENST00000314759 B3GALT2O43825 422 aa12.31□□□□□ -0.44
SKA3-202ENST00000314759 FGF17O60258 216 aa12.31□□□□□ -0.44
SKA3-202ENST00000314759 GPRIN2O60269 458 aa12.31□□□□□ -0.44
SKA3-202ENST00000314759 CTSVO60911 334 aa12.31□□□□□ -0.44
SKA3-202ENST00000314759 ZFPL1O95159 310 aa12.31□□□□□ -0.44
SKA3-202ENST00000314759 IGF2P01344 180 aa12.31□□□□□ -0.44
SKA3-202ENST00000314759 GABRA1P14867 456 aa12.31□□□□□ -0.44
SKA3-202ENST00000314759 CDK2P24941 298 aa12.31□□□□□ -0.44
SKA3-202ENST00000314759 MAP3K8P41279 467 aa12.31□□□□□ -0.44
SKA3-202ENST00000314759 ACAA2P42765 397 aaKnown RBP12.31□□□□□ -0.44
SKA3-202ENST00000314759 UBE2MP61081 183 aaKnown RBP12.31□□□□□ -0.44
SKA3-202ENST00000314759 SEC61A1P61619 476 aaKnown RBP12.31□□□□□ -0.44
SKA3-202ENST00000314759 CST6Q15828 149 aa12.31□□□□□ -0.44
SKA3-202ENST00000314759 ALG10BQ5I7T1 473 aa12.31□□□□□ -0.44
SKA3-202ENST00000314759 ZC3H14Q6PJT7 736 aaKnown RBP12.31□□□□□ -0.44
SKA3-202ENST00000314759 TMEM52Q8NDY8 209 aa12.31□□□□□ -0.44
SKA3-202ENST00000314759 OR2A5Q96R48 311 aa12.31□□□□□ -0.44
SKA3-202ENST00000314759 NMNAT3Q96T66 252 aa12.31□□□□□ -0.44
SKA3-202ENST00000314759 ARL6Q9H0F7 186 aa12.31□□□□□ -0.44
SKA3-202ENST00000314759 TRPV4Q9HBA0 871 aa12.31□□□□□ -0.44
SKA3-202ENST00000314759 CAPN10Q9HC96 672 aa12.31□□□□□ -0.44
SKA3-202ENST00000314759 TAS2R10Q9NYW0 307 aa12.31□□□□□ -0.44
SKA3-202ENST00000314759 ZNF281Q9Y2X9 895 aa12.31□□□□□ -0.44
SKA3-202ENST00000314759 A0A1W2PP55 124 aa12.31□□□□□ -0.44
SKA3-202ENST00000314759 PRR32B1ATL7 298 aa12.31□□□□□ -0.44
SKA3-202ENST00000314759 HNRNPA1P09651 372 aaKnown RBP eCLIP12.31□□□□□ -0.44
SKA3-202ENST00000314759 CT62P0C5K7 136 aa12.31□□□□□ -0.44
SKA3-202ENST00000314759 EMDP50402 254 aa12.31□□□□□ -0.44
SKA3-202ENST00000314759 RTL10Q7L3V2 364 aa12.31□□□□□ -0.44
SKA3-202ENST00000314759 RELL2Q8NC24 303 aaPredicted RBP12.31□□□□□ -0.44
SKA3-202ENST00000314759 OR5M1Q8NGP8 315 aa12.31□□□□□ -0.44
SKA3-202ENST00000314759 ZPLD1Q8TCW7 415 aa12.31□□□□□ -0.44
SKA3-202ENST00000314759 RNF166Q96A37 237 aaPredicted RBP12.31□□□□□ -0.44
SKA3-202ENST00000314759 TM4SF19Q96DZ7 209 aa12.31□□□□□ -0.44
SKA3-202ENST00000314759 UTP23Q9BRU9 249 aaKnown RBP12.31□□□□□ -0.44
SKA3-202ENST00000314759 TMPRSS13Q9BYE2 586 aa12.31□□□□□ -0.44
SKA3-202ENST00000314759 RNF208Q9H0X6 261 aa12.31□□□□□ -0.44
SKA3-202ENST00000314759 EVA1AQ9H8M9 152 aa12.31□□□□□ -0.44
SKA3-202ENST00000314759 FKRPQ9H9S5 495 aa12.31□□□□□ -0.44
SKA3-202ENST00000314759 THAP10Q9P2Z0 257 aaPredicted RBP12.31□□□□□ -0.44
SKA3-202ENST00000314759 FBXL21Q9UKT6 434 aa12.31□□□□□ -0.44
SKA3-202ENST00000314759 A0A087WV62 115 aa12.31□□□□□ -0.44
SKA3-202ENST00000314759 A0A1B0GTQ1 180 aa12.31□□□□□ -0.44
SKA3-202ENST00000314759 SULT1B1O43704 296 aa12.31□□□□□ -0.44
SKA3-202ENST00000314759 RP2O75695 350 aa12.31□□□□□ -0.44
SKA3-202ENST00000314759 NDUFB6O95139 128 aa12.31□□□□□ -0.44
SKA3-202ENST00000314759 NDUFB2O95178 105 aa12.31□□□□□ -0.44
SKA3-202ENST00000314759 H2BFSP57053 126 aa12.31□□□□□ -0.44
SKA3-202ENST00000314759 B2MP61769 119 aa12.31□□□□□ -0.44
SKA3-202ENST00000314759 STX4Q12846 297 aa12.31□□□□□ -0.44
SKA3-202ENST00000314759 ILF3Q12906 894 aaKnown RBP eCLIP12.31□□□□□ -0.441e-7■■■■□ 26.5
SKA3-202ENST00000314759 CSRP2Q16527 193 aa12.31□□□□□ -0.44
SKA3-202ENST00000314759 FAM78AQ5JUQ0 283 aa12.31□□□□□ -0.44
SKA3-202ENST00000314759 PRSS41Q7RTY9 318 aa12.31□□□□□ -0.44
SKA3-202ENST00000314759 LSM14AQ8ND56 463 aaKnown RBP12.31□□□□□ -0.44
SKA3-202ENST00000314759 NPEPL1Q8NDH3 523 aa12.31□□□□□ -0.44
SKA3-202ENST00000314759 RPS4Y2Q8TD47 263 aa12.31□□□□□ -0.44
SKA3-202ENST00000314759 HSPA12BQ96MM6 686 aa12.31□□□□□ -0.44
SKA3-202ENST00000314759 TSPAN10Q9H1Z9 355 aaPredicted RBP12.31□□□□□ -0.44
SKA3-202ENST00000314759 TBC1D29Q9UFV1 150 aa12.31□□□□□ -0.44
SKA3-202ENST00000314759 MRPS2Q9Y399 296 aaKnown RBP12.31□□□□□ -0.44
SKA3-202ENST00000314759 FXYD6-FXYD2A0A087WZ82 144 aa12.3□□□□□ -0.44
SKA3-202ENST00000314759 OR6C68A6NDL8 312 aa12.3□□□□□ -0.44
SKA3-202ENST00000314759 SNRPGP15A8MWD9 76 aa12.3□□□□□ -0.44
SKA3-202ENST00000314759 HIST1H2ABP04908 130 aa12.3□□□□□ -0.44
SKA3-202ENST00000314759 AK4P27144 223 aaPredicted RBP12.3□□□□□ -0.44
SKA3-202ENST00000314759 GRPRP30550 384 aa12.3□□□□□ -0.44
SKA3-202ENST00000314759 RBM34P42696 430 aaKnown RBP12.3□□□□□ -0.44
SKA3-202ENST00000314759 MGAT2Q10469 447 aa12.3□□□□□ -0.44
SKA3-202ENST00000314759 PRICKLE4Q2TBC4 344 aa12.3□□□□□ -0.44
SKA3-202ENST00000314759 HIST3H2AQ7L7L0 130 aa12.3□□□□□ -0.44
SKA3-202ENST00000314759 OR6K6Q8NGW6 343 aa12.3□□□□□ -0.44
SKA3-202ENST00000314759 ATOH1Q92858 354 aaPredicted RBP12.3□□□□□ -0.44
SKA3-202ENST00000314759 HIST1H2ACQ93077 130 aa12.3□□□□□ -0.44
SKA3-202ENST00000314759 HAVCR1Q96D42 359 aa12.3□□□□□ -0.44
SKA3-202ENST00000314759 GPR174Q9BXC1 333 aa12.3□□□□□ -0.44
SKA3-202ENST00000314759 CFHR5Q9BXR6 569 aa12.3□□□□□ -0.44
SKA3-202ENST00000314759 SEMA4CQ9C0C4 833 aa12.3□□□□□ -0.44
SKA3-202ENST00000314759 FXYD6Q9H0Q3 95 aa12.3□□□□□ -0.44
SKA3-202ENST00000314759 GPN1Q9HCN4 374 aaPredicted RBP12.3□□□□□ -0.44
SKA3-202ENST00000314759 ZNF175Q9Y473 711 aa12.3□□□□□ -0.44
SKA3-202ENST00000314759 ENTPD2Q9Y5L3 495 aa12.3□□□□□ -0.44
SKA3-202ENST00000314759 COLEC10Q9Y6Z7 277 aa12.3□□□□□ -0.44
SKA3-202ENST00000314759 PTPRSQ13332 1948 aa12.3□□□□□ -0.44
SKA3-202ENST00000314759 IL5P05113 134 aa12.3□□□□□ -0.44
SKA3-202ENST00000314759 RAB40ALP0C0E4 278 aa12.3□□□□□ -0.44
SKA3-202ENST00000314759 RAB3AP20336 220 aa12.3□□□□□ -0.44
SKA3-202ENST00000314759 CALCRP30988 508 aa12.3□□□□□ -0.44
SKA3-202ENST00000314759 MECP2P51608 486 aaKnown RBP12.3□□□□□ -0.44
SKA3-202ENST00000314759 CBFBQ13951 182 aa12.3□□□□□ -0.44
SKA3-202ENST00000314759 GXYLT1Q4G148 440 aa12.3□□□□□ -0.44
SKA3-202ENST00000314759 C2orf27AQ580R0 203 aa12.3□□□□□ -0.44
SKA3-202ENST00000314759 ZNF660Q6AZW8 331 aaPredicted RBP12.3□□□□□ -0.44
SKA3-202ENST00000314759 OR7E24Q6IFN5 339 aa12.3□□□□□ -0.44
SKA3-202ENST00000314759 RAB40AQ8WXH6 277 aa12.3□□□□□ -0.44
SKA3-202ENST00000314759 MYADMQ96S97 322 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms