RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 SYT4Q9H2B2 425 aa10.53□□□□□ -0.72
PTPN2-201ENST00000309660 HAO2Q9NYQ3 351 aa10.53□□□□□ -0.72
PTPN2-201ENST00000309660 NDUFB5O43674 189 aa10.53□□□□□ -0.72
PTPN2-201ENST00000309660 CDC40O60508 579 aaKnown RBP eCLIP10.53□□□□□ -0.72
PTPN2-201ENST00000309660 IGLV3-19P01714 112 aa10.53□□□□□ -0.72
PTPN2-201ENST00000309660 ARSBP15848 533 aa10.53□□□□□ -0.72
PTPN2-201ENST00000309660 CXCR1P25024 350 aa10.53□□□□□ -0.72
PTPN2-201ENST00000309660 AGFG1P52594 562 aaKnown RBP10.53□□□□□ -0.72
PTPN2-201ENST00000309660 BIKQ13323 160 aa10.53□□□□□ -0.72
PTPN2-201ENST00000309660 ZNF74Q16587 644 aa10.53□□□□□ -0.72
PTPN2-201ENST00000309660 C14orf28Q4W4Y0 310 aa10.53□□□□□ -0.72
PTPN2-201ENST00000309660 KANSL1Q7Z3B3 1105 aa10.53□□□□□ -0.72
PTPN2-201ENST00000309660 NOXA1Q86UR1 476 aa10.53□□□□□ -0.72
PTPN2-201ENST00000309660 TOMM5Q8N4H5 51 aa10.53□□□□□ -0.72
PTPN2-201ENST00000309660 HOXB13Q92826 284 aaPredicted RBP10.53□□□□□ -0.72
PTPN2-201ENST00000309660 LPAR4Q99677 370 aa10.53□□□□□ -0.72
PTPN2-201ENST00000309660 NOX1Q9Y5S8 564 aa10.53□□□□□ -0.72
PTPN2-201ENST00000309660 LRP4O75096 1905 aa10.53□□□□□ -0.72
PTPN2-201ENST00000309660 A0A0G2JK05 382 aa10.52□□□□□ -0.72
PTPN2-201ENST00000309660 TSC22D2O75157 780 aa10.52□□□□□ -0.72
PTPN2-201ENST00000309660 SLC25A12O75746 678 aa10.52□□□□□ -0.72
PTPN2-201ENST00000309660 IGLV3-21P80748 117 aaPredicted RBP10.52□□□□□ -0.72
PTPN2-201ENST00000309660 RPL18Q07020 188 aaKnown RBP10.52□□□□□ -0.72
PTPN2-201ENST00000309660 PLCXD2Q0VAA5 305 aa10.52□□□□□ -0.72
PTPN2-201ENST00000309660 CEP78Q5JTW2 689 aa10.52□□□□□ -0.72
PTPN2-201ENST00000309660 LINGO2Q7L985 606 aa10.52□□□□□ -0.72
PTPN2-201ENST00000309660 DPY19L4Q7Z388 723 aa10.52□□□□□ -0.72
PTPN2-201ENST00000309660 FAM220AQ7Z4H9 259 aa10.52□□□□□ -0.72
PTPN2-201ENST00000309660 TPRA1Q86W33 373 aa10.52□□□□□ -0.72
PTPN2-201ENST00000309660 CMIPQ8IY22 773 aa10.52□□□□□ -0.72
PTPN2-201ENST00000309660 ADAMTS18Q8TE60 1221 aa10.52□□□□□ -0.72
PTPN2-201ENST00000309660 PIGKQ92643 395 aa10.52□□□□□ -0.72
PTPN2-201ENST00000309660 LCORQ96JN0 433 aaPredicted RBP10.52□□□□□ -0.72
PTPN2-201ENST00000309660 NUDT9Q9BW91 350 aa10.52□□□□□ -0.72
PTPN2-201ENST00000309660 GPR27Q9NS67 375 aa10.52□□□□□ -0.72
PTPN2-201ENST00000309660 GMEB2Q9UKD1 530 aa10.52□□□□□ -0.72
PTPN2-201ENST00000309660 LILRA5A6NI73 299 aa10.52□□□□□ -0.73
PTPN2-201ENST00000309660 NOTOA8MTQ0 251 aa10.52□□□□□ -0.73
PTPN2-201ENST00000309660 PRR32B1ATL7 298 aa10.52□□□□□ -0.73
PTPN2-201ENST00000309660 MBTPS2O43462 519 aa10.52□□□□□ -0.73
PTPN2-201ENST00000309660 ZFPL1O95159 310 aa10.52□□□□□ -0.73
PTPN2-201ENST00000309660 FCER2P06734 321 aa10.52□□□□□ -0.73
PTPN2-201ENST00000309660 CD14P08571 375 aa10.52□□□□□ -0.73
PTPN2-201ENST00000309660 EPXP11678 715 aa10.52□□□□□ -0.73
PTPN2-201ENST00000309660 FOLR1P15328 257 aa10.52□□□□□ -0.73
PTPN2-201ENST00000309660 NPR2P20594 1047 aa10.52□□□□□ -0.73
PTPN2-201ENST00000309660 GALP22466 123 aa10.52□□□□□ -0.73
PTPN2-201ENST00000309660 MST1P26927 711 aa10.52□□□□□ -0.73
PTPN2-201ENST00000309660 NANOS3P60323 173 aaKnown RBP10.52□□□□□ -0.73
PTPN2-201ENST00000309660 MRPL28Q13084 256 aaKnown RBP10.52□□□□□ -0.73
PTPN2-201ENST00000309660 SKP2Q13309 424 aa10.52□□□□□ -0.73
PTPN2-201ENST00000309660 OR1L3Q8NH93 324 aa10.52□□□□□ -0.73
PTPN2-201ENST00000309660 OR14A16Q8NHC5 309 aa10.52□□□□□ -0.73
PTPN2-201ENST00000309660 MESP1Q9BRJ9 268 aa10.52□□□□□ -0.73
PTPN2-201ENST00000309660 MMP25Q9NPA2 562 aa10.52□□□□□ -0.73
PTPN2-201ENST00000309660 LANCL2Q9NS86 450 aa10.52□□□□□ -0.73
PTPN2-201ENST00000309660 ICAM5Q9UMF0 924 aa10.52□□□□□ -0.73
PTPN2-201ENST00000309660 LMO7DNF2Z398 122 aa10.52□□□□□ -0.73
PTPN2-201ENST00000309660 H0YIG0 161 aa10.52□□□□□ -0.73
PTPN2-201ENST00000309660 YES1P07947 543 aa10.52□□□□□ -0.73
PTPN2-201ENST00000309660 ADRB1P08588 477 aa10.52□□□□□ -0.73
PTPN2-201ENST00000309660 PNMTP11086 282 aa10.52□□□□□ -0.73
PTPN2-201ENST00000309660 GLULP15104 373 aa10.52□□□□□ -0.73
PTPN2-201ENST00000309660 RBMS1P29558 406 aaKnown RBP10.52□□□□□ -0.73
PTPN2-201ENST00000309660 PPICP45877 212 aa10.52□□□□□ -0.73
PTPN2-201ENST00000309660 GABRA4P48169 554 aa10.52□□□□□ -0.73
PTPN2-201ENST00000309660 CCR6P51684 374 aa10.52□□□□□ -0.73
PTPN2-201ENST00000309660 LTBQ06643 244 aa10.52□□□□□ -0.73
PTPN2-201ENST00000309660 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.52□□□□□ -0.73
PTPN2-201ENST00000309660 RPL22L1Q6P5R6 122 aaKnown RBP10.52□□□□□ -0.73
PTPN2-201ENST00000309660 LANCL3Q6ZV70 420 aa10.52□□□□□ -0.73
PTPN2-201ENST00000309660 ASCC1Q8N9N2 400 aaKnown RBP10.52□□□□□ -0.73
PTPN2-201ENST00000309660 DNAAF1Q8NEP3 725 aa10.52□□□□□ -0.73
PTPN2-201ENST00000309660 BEST4Q8NFU0 473 aa10.52□□□□□ -0.73
PTPN2-201ENST00000309660 FAM174AQ8TBP5 190 aa10.52□□□□□ -0.73
PTPN2-201ENST00000309660 KLHDC2Q9Y2U9 406 aa10.52□□□□□ -0.73
PTPN2-201ENST00000309660 A0A1W2PR77 199 aa10.51□□□□□ -0.73
PTPN2-201ENST00000309660 WISP1O95388 367 aa10.51□□□□□ -0.73
PTPN2-201ENST00000309660 MT-ND4P03905 459 aa10.51□□□□□ -0.73
PTPN2-201ENST00000309660 CLPSP04118 112 aa10.51□□□□□ -0.73
PTPN2-201ENST00000309660 PTHLHP12272 177 aa10.51□□□□□ -0.73
PTPN2-201ENST00000309660 PRKCAP17252 672 aa10.51□□□□□ -0.73
PTPN2-201ENST00000309660 FBLP22087 321 aaKnown RBP10.51□□□□□ -0.73
PTPN2-201ENST00000309660 GIFP27352 417 aa10.51□□□□□ -0.73
PTPN2-201ENST00000309660 ZNF117Q03924 483 aa10.51□□□□□ -0.73
PTPN2-201ENST00000309660 EGR4Q05215 589 aa10.51□□□□□ -0.73
PTPN2-201ENST00000309660 SLC35D2Q76EJ3 337 aa10.51□□□□□ -0.73
PTPN2-201ENST00000309660 PXKQ7Z7A4 578 aa10.51□□□□□ -0.73
PTPN2-201ENST00000309660 ATG4DQ86TL0 474 aaPredicted RBP10.51□□□□□ -0.73
PTPN2-201ENST00000309660 KDM8Q8N371 416 aa10.51□□□□□ -0.73
PTPN2-201ENST00000309660 TAAR8Q969N4 342 aa10.51□□□□□ -0.73
PTPN2-201ENST00000309660 KCTD12Q96CX2 325 aaKnown RBP10.51□□□□□ -0.73
PTPN2-201ENST00000309660 NKX3-1Q99801 234 aaPredicted RBP10.51□□□□□ -0.73
PTPN2-201ENST00000309660 PHF7Q9BWX1 381 aaPredicted RBP10.51□□□□□ -0.73
PTPN2-201ENST00000309660 ULBP3Q9BZM4 244 aa10.51□□□□□ -0.73
PTPN2-201ENST00000309660 AUNIPQ9H7T9 357 aa10.51□□□□□ -0.73
PTPN2-201ENST00000309660 COPS7AQ9UBW8 275 aa10.51□□□□□ -0.73
PTPN2-201ENST00000309660 LAMP5Q9UJQ1 280 aa10.51□□□□□ -0.73
PTPN2-201ENST00000309660 ZNF222Q9UK12 451 aa10.51□□□□□ -0.73
PTPN2-201ENST00000309660 CACNG2Q9Y698 323 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms