RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 DNTTIP1Q9H147 329 aa9.48□□□□□ -0.89
APOBEC3F-201ENST00000308521 SLC38A1Q9H2H9 487 aa9.48□□□□□ -0.89
APOBEC3F-201ENST00000308521 GPR55Q9Y2T6 319 aaPredicted RBP9.48□□□□□ -0.89
APOBEC3F-201ENST00000308521 A0A0J9YY10 115 aa9.48□□□□□ -0.89
APOBEC3F-201ENST00000308521 CTDSPLO15194 276 aa9.48□□□□□ -0.89
APOBEC3F-201ENST00000308521 TNFSF14O43557 240 aa9.48□□□□□ -0.89
APOBEC3F-201ENST00000308521 SC5DO75845 299 aa9.48□□□□□ -0.89
APOBEC3F-201ENST00000308521 SLC2A10O95528 541 aa9.48□□□□□ -0.89
APOBEC3F-201ENST00000308521 HMGN2P05204 90 aaKnown RBP9.48□□□□□ -0.89
APOBEC3F-201ENST00000308521 S100A9P06702 114 aaKnown RBP9.48□□□□□ -0.89
APOBEC3F-201ENST00000308521 PAICSP22234 425 aaKnown RBP9.48□□□□□ -0.89
APOBEC3F-201ENST00000308521 GIFP27352 417 aa9.48□□□□□ -0.89
APOBEC3F-201ENST00000308521 TRHRP34981 398 aaPredicted RBP9.48□□□□□ -0.89
APOBEC3F-201ENST00000308521 SRP9P49458 86 aaKnown RBP9.48□□□□□ -0.89
APOBEC3F-201ENST00000308521 GPR143P51810 404 aa9.48□□□□□ -0.89
APOBEC3F-201ENST00000308521 SIM1P81133 766 aaPredicted RBP9.48□□□□□ -0.89
APOBEC3F-201ENST00000308521 LASP1Q14847 261 aaKnown RBP9.48□□□□□ -0.89
APOBEC3F-201ENST00000308521 ST3GAL2Q16842 350 aa9.48□□□□□ -0.89
APOBEC3F-201ENST00000308521 SLC22A10Q63ZE4 541 aa9.48□□□□□ -0.89
APOBEC3F-201ENST00000308521 B3GNTL1Q67FW5 361 aaPredicted RBP9.48□□□□□ -0.89
APOBEC3F-201ENST00000308521 NIPAL3Q6P499 406 aa9.48□□□□□ -0.89
APOBEC3F-201ENST00000308521 NKAIN4Q8IVV8 208 aa9.48□□□□□ -0.89
APOBEC3F-201ENST00000308521 SIAH3Q8IW03 269 aa9.48□□□□□ -0.89
APOBEC3F-201ENST00000308521 OR51G2Q8NGK0 314 aa9.48□□□□□ -0.89
APOBEC3F-201ENST00000308521 OR56B4Q8NH76 319 aa9.48□□□□□ -0.89
APOBEC3F-201ENST00000308521 CEP76Q8TAP6 659 aa9.48□□□□□ -0.89
APOBEC3F-201ENST00000308521 ABHD4Q8TB40 342 aa9.48□□□□□ -0.89
APOBEC3F-201ENST00000308521 BRIX1Q8TDN6 353 aaKnown RBP9.48□□□□□ -0.89
APOBEC3F-201ENST00000308521 RERGQ96A58 199 aaPredicted RBP9.48□□□□□ -0.89
APOBEC3F-201ENST00000308521 TCEAL7Q9BRU2 100 aa9.48□□□□□ -0.89
APOBEC3F-201ENST00000308521 PDCD10Q9BUL8 212 aa9.48□□□□□ -0.89
APOBEC3F-201ENST00000308521 OR51M1Q9H341 326 aa9.48□□□□□ -0.89
APOBEC3F-201ENST00000308521 ESRP2Q9H6T0 727 aaKnown RBP9.48□□□□□ -0.89
APOBEC3F-201ENST00000308521 KLHL28Q9NXS3 571 aa9.48□□□□□ -0.89
APOBEC3F-201ENST00000308521 HCN3Q9P1Z3 774 aa9.48□□□□□ -0.89
APOBEC3F-201ENST00000308521 CHST2Q9Y4C5 530 aa9.48□□□□□ -0.89
APOBEC3F-201ENST00000308521 MT-ND5P03915 603 aa9.47□□□□□ -0.89
APOBEC3F-201ENST00000308521 AFF3P51826 1226 aaKnown RBP9.47□□□□□ -0.89
APOBEC3F-201ENST00000308521 HNRNPKP61978 463 aaKnown RBP eCLIP9.47□□□□□ -0.89
APOBEC3F-201ENST00000308521 STX4Q12846 297 aa9.47□□□□□ -0.89
APOBEC3F-201ENST00000308521 AMZ1Q400G9 498 aa9.47□□□□□ -0.89
APOBEC3F-201ENST00000308521 MRM1Q6IN84 353 aaKnown RBP9.47□□□□□ -0.89
APOBEC3F-201ENST00000308521 SEZ6L2Q6UXD5 910 aa9.47□□□□□ -0.89
APOBEC3F-201ENST00000308521 C3P1Q6ZMU1 363 aa9.47□□□□□ -0.89
APOBEC3F-201ENST00000308521 GDF7Q7Z4P5 450 aa9.47□□□□□ -0.89
APOBEC3F-201ENST00000308521 VRK2Q86Y07 508 aa9.47□□□□□ -0.89
APOBEC3F-201ENST00000308521 NRMQ8IXM6 262 aa9.47□□□□□ -0.89
APOBEC3F-201ENST00000308521 TM4SF19Q96DZ7 209 aa9.47□□□□□ -0.89
APOBEC3F-201ENST00000308521 TGM7Q96PF1 710 aa9.47□□□□□ -0.89
APOBEC3F-201ENST00000308521 OR7D2Q96RA2 312 aa9.47□□□□□ -0.89
APOBEC3F-201ENST00000308521 UBQLN3Q9H347 655 aa9.47□□□□□ -0.89
APOBEC3F-201ENST00000308521 ZCCHC4Q9H5U6 513 aa9.47□□□□□ -0.89
APOBEC3F-201ENST00000308521 BRD7Q9NPI1 651 aa9.47□□□□□ -0.89
APOBEC3F-201ENST00000308521 KRCC1Q9NPI7 259 aaPredicted RBP9.47□□□□□ -0.89
APOBEC3F-201ENST00000308521 GSN-AS1Q9NRJ2 163 aa9.47□□□□□ -0.89
APOBEC3F-201ENST00000308521 ABRACLQ9P1F3 81 aa9.47□□□□□ -0.89
APOBEC3F-201ENST00000308521 POMT2Q9UKY4 750 aa9.47□□□□□ -0.89
APOBEC3F-201ENST00000308521 SPATA2Q9UM82 520 aa9.47□□□□□ -0.89
APOBEC3F-201ENST00000308521 EDARQ9UNE0 448 aa9.47□□□□□ -0.89
APOBEC3F-201ENST00000308521 TRAV1-2A0A0B4J238 106 aa9.47□□□□□ -0.89
APOBEC3F-201ENST00000308521 DAPL1A0PJW8 107 aa9.47□□□□□ -0.89
APOBEC3F-201ENST00000308521 ANKRD61A6NGH8 418 aa9.47□□□□□ -0.89
APOBEC3F-201ENST00000308521 EMC8O43402 210 aa9.47□□□□□ -0.89
APOBEC3F-201ENST00000308521 ITGA10O75578 1167 aa9.47□□□□□ -0.89
APOBEC3F-201ENST00000308521 HTR3BO95264 441 aa9.47□□□□□ -0.89
APOBEC3F-201ENST00000308521 GPR4P46093 362 aa9.47□□□□□ -0.89
APOBEC3F-201ENST00000308521 OR10A3P58181 314 aa9.47□□□□□ -0.89
APOBEC3F-201ENST00000308521 TGM3Q08188 693 aa9.47□□□□□ -0.89
APOBEC3F-201ENST00000308521 SWI5Q1ZZU3 235 aa9.47□□□□□ -0.89
APOBEC3F-201ENST00000308521 USP53Q70EK8 1073 aa9.47□□□□□ -0.89
APOBEC3F-201ENST00000308521 CEACAM19Q7Z692 300 aa9.47□□□□□ -0.89
APOBEC3F-201ENST00000308521 NAXDQ8IW45 347 aa9.47□□□□□ -0.89
APOBEC3F-201ENST00000308521 SLC25A45Q8N413 288 aa9.47□□□□□ -0.89
APOBEC3F-201ENST00000308521 TMEM99Q8N816 258 aa9.47□□□□□ -0.89
APOBEC3F-201ENST00000308521 KAT2AQ92830 837 aa9.47□□□□□ -0.89
APOBEC3F-201ENST00000308521 SLC41A3Q96GZ6 507 aa9.47□□□□□ -0.89
APOBEC3F-201ENST00000308521 SAMD8Q96LT4 415 aa9.47□□□□□ -0.89
APOBEC3F-201ENST00000308521 CCDC3Q9BQI4 270 aa9.47□□□□□ -0.89
APOBEC3F-201ENST00000308521 RBCK1Q9BYM8 510 aa9.47□□□□□ -0.89
APOBEC3F-201ENST00000308521 BCL2L14Q9BZR8 327 aa9.47□□□□□ -0.89
APOBEC3F-201ENST00000308521 QRSL1Q9H0R6 528 aaKnown RBP9.47□□□□□ -0.89
APOBEC3F-201ENST00000308521 CAMK2AQ9UQM7 478 aa9.47□□□□□ -0.89
APOBEC3F-201ENST00000308521 ENTPD2Q9Y5L3 495 aa9.47□□□□□ -0.89
APOBEC3F-201ENST00000308521 KCNE3Q9Y6H6 103 aa9.47□□□□□ -0.89
APOBEC3F-201ENST00000308521 TRABD2BA6NFA1 517 aa9.46□□□□□ -0.89
APOBEC3F-201ENST00000308521 OR2W5A6NFC9 320 aa9.46□□□□□ -0.89
APOBEC3F-201ENST00000308521 LRRN3E7EW58 273 aa9.46□□□□□ -0.89
APOBEC3F-201ENST00000308521 PDCD5O14737 125 aa9.46□□□□□ -0.89
APOBEC3F-201ENST00000308521 FRS3O43559 492 aa9.46□□□□□ -0.89
APOBEC3F-201ENST00000308521 LDB3O75112 727 aa9.46□□□□□ -0.89
APOBEC3F-201ENST00000308521 PIAS2O75928 621 aa9.46□□□□□ -0.89
APOBEC3F-201ENST00000308521 NTN1O95631 604 aa9.46□□□□□ -0.89
APOBEC3F-201ENST00000308521 THY1P04216 161 aa9.46□□□□□ -0.89
APOBEC3F-201ENST00000308521 SAGP10523 405 aaPredicted RBP9.46□□□□□ -0.89
APOBEC3F-201ENST00000308521 OR1D5P58170 312 aa9.46□□□□□ -0.89
APOBEC3F-201ENST00000308521 PRR5P85299 388 aa9.46□□□□□ -0.89
APOBEC3F-201ENST00000308521 ZXDAP98168 799 aa9.46□□□□□ -0.89
APOBEC3F-201ENST00000308521 KLF9Q13886 244 aaPredicted RBP9.46□□□□□ -0.89
APOBEC3F-201ENST00000308521 CHMP1BQ7LBR1 199 aa9.46□□□□□ -0.89
APOBEC3F-201ENST00000308521 LSRQ86X29 649 aaPredicted RBP9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms