RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 PAQR6Q6TCH4 344 aa11.75□□□□□ -0.53
USP38-201ENST00000307017 HIST2H3AQ71DI3 136 aa11.75□□□□□ -0.53
USP38-201ENST00000307017 TMEM123Q8N131 208 aa11.75□□□□□ -0.53
USP38-201ENST00000307017 OR2T27Q8NH04 317 aa11.75□□□□□ -0.53
USP38-201ENST00000307017 TERB2Q8NHR7 220 aa11.75□□□□□ -0.53
USP38-201ENST00000307017 ZNF582Q96NG8 517 aaPredicted RBP11.75□□□□□ -0.53
USP38-201ENST00000307017 MSL2Q9HCI7 577 aa11.75□□□□□ -0.53
USP38-201ENST00000307017 TAS2R8Q9NYW2 309 aa11.75□□□□□ -0.53
USP38-201ENST00000307017 NALCNQ8IZF0 1738 aa11.75□□□□□ -0.53
USP38-201ENST00000307017 UBBP0CG47 229 aa11.75□□□□□ -0.53
USP38-201ENST00000307017 UBCP0CG48 685 aaKnown RBP11.75□□□□□ -0.53
USP38-201ENST00000307017 IVDP26440 423 aa11.75□□□□□ -0.53
USP38-201ENST00000307017 OR10A3P58181 314 aa11.75□□□□□ -0.53
USP38-201ENST00000307017 OTUD1Q5VV17 481 aaPredicted RBP11.75□□□□□ -0.53
USP38-201ENST00000307017 TPRA1Q86W33 373 aa11.75□□□□□ -0.53
USP38-201ENST00000307017 ANTXRLA6NF34 631 aa11.75□□□□□ -0.53
USP38-201ENST00000307017 TRILQ7L0X0 811 aa11.75□□□□□ -0.53
USP38-201ENST00000307017 OR52I1Q8NGK6 324 aa11.75□□□□□ -0.53
USP38-201ENST00000307017 OR8U1Q8NH10 309 aa11.75□□□□□ -0.53
USP38-201ENST00000307017 PLPPR2Q96GM1 343 aa11.75□□□□□ -0.53
USP38-201ENST00000307017 ARPC5LQ9BPX5 153 aa11.75□□□□□ -0.53
USP38-201ENST00000307017 TMEM59Q9BXS4 323 aa11.75□□□□□ -0.53
USP38-201ENST00000307017 NIT2Q9NQR4 276 aa11.75□□□□□ -0.53
USP38-201ENST00000307017 CD207Q9UJ71 328 aa11.75□□□□□ -0.53
USP38-201ENST00000307017 TRAPPC2LH3BP13 241 aa11.75□□□□□ -0.53
USP38-201ENST00000307017 EIF2DP41214 584 aaKnown RBP11.75□□□□□ -0.53
USP38-201ENST00000307017 GRB2P62993 217 aaKnown RBP11.75□□□□□ -0.53
USP38-201ENST00000307017 KEAP1Q14145 624 aa11.75□□□□□ -0.53
USP38-201ENST00000307017 ADAM5Q6NVV9 412 aa11.75□□□□□ -0.53
USP38-201ENST00000307017 Q7L0L9 218 aa11.75□□□□□ -0.53
USP38-201ENST00000307017 RHBDD1Q8TEB9 315 aa11.75□□□□□ -0.53
USP38-201ENST00000307017 C1GALT1Q9NS00 363 aa11.75□□□□□ -0.53
USP38-201ENST00000307017 RNF150Q9ULK6 438 aa11.75□□□□□ -0.53
USP38-201ENST00000307017 DRD2P14416 443 aa11.74□□□□□ -0.53
USP38-201ENST00000307017 RUNX3Q13761 415 aa11.74□□□□□ -0.53
USP38-201ENST00000307017 RAB41Q5JT25 222 aa11.74□□□□□ -0.53
USP38-201ENST00000307017 PRSS36Q5K4E3 855 aa11.74□□□□□ -0.53
USP38-201ENST00000307017 VASH2Q86V25 355 aa11.74□□□□□ -0.53
USP38-201ENST00000307017 LILRA2Q8N149 483 aa11.74□□□□□ -0.53
USP38-201ENST00000307017 NICN1Q9BSH3 213 aa11.74□□□□□ -0.53
USP38-201ENST00000307017 APOOQ9BUR5 198 aa11.74□□□□□ -0.53
USP38-201ENST00000307017 ENKD1Q9H0I2 346 aa11.74□□□□□ -0.53
USP38-201ENST00000307017 PLSCR3Q9NRY6 295 aa11.74□□□□□ -0.53
USP38-201ENST00000307017 AKR7A2O43488 359 aa11.74□□□□□ -0.53
USP38-201ENST00000307017 OR2T1O43869 369 aa11.74□□□□□ -0.53
USP38-201ENST00000307017 PIPP12273 146 aaPredicted RBP11.74□□□□□ -0.53
USP38-201ENST00000307017 IL2RGP31785 369 aa11.74□□□□□ -0.53
USP38-201ENST00000307017 HMGCLP35914 325 aa11.74□□□□□ -0.53
USP38-201ENST00000307017 RPS27P42677 84 aaKnown RBP11.74□□□□□ -0.53
USP38-201ENST00000307017 ZNF74Q16587 644 aa11.74□□□□□ -0.53
USP38-201ENST00000307017 KCNIP4Q6PIL6 250 aa11.74□□□□□ -0.53
USP38-201ENST00000307017 BRICD5Q6PL45 260 aa11.74□□□□□ -0.53
USP38-201ENST00000307017 DPPA2Q7Z7J5 298 aa11.74□□□□□ -0.53
USP38-201ENST00000307017 RDH10Q8IZV5 341 aa11.74□□□□□ -0.53
USP38-201ENST00000307017 KIAA1958Q8N8K9 716 aa11.74□□□□□ -0.53
USP38-201ENST00000307017 OR52B4Q8NGK2 314 aa11.74□□□□□ -0.53
USP38-201ENST00000307017 MITD1Q8WV92 249 aa11.74□□□□□ -0.53
USP38-201ENST00000307017 UGDHO60701 494 aa11.74□□□□□ -0.53
USP38-201ENST00000307017 PAX6P26367 422 aa11.74□□□□□ -0.53
USP38-201ENST00000307017 BLVRBP30043 206 aaPredicted RBP11.74□□□□□ -0.53
USP38-201ENST00000307017 GABRA4P48169 554 aa11.74□□□□□ -0.53
USP38-201ENST00000307017 TMEM176BQ3YBM2 270 aaPredicted RBP11.74□□□□□ -0.53
USP38-201ENST00000307017 ESCO2Q56NI9 601 aa11.74□□□□□ -0.53
USP38-201ENST00000307017 SLC30A7Q8NEW0 376 aa11.74□□□□□ -0.53
USP38-201ENST00000307017 GHSRQ92847 366 aa11.74□□□□□ -0.53
USP38-201ENST00000307017 TBC1D20Q96BZ9 403 aa11.74□□□□□ -0.53
USP38-201ENST00000307017 KCNJ15Q99712 375 aa11.74□□□□□ -0.53
USP38-201ENST00000307017 DHCR7Q9UBM7 475 aaKnown RBP11.74□□□□□ -0.53
USP38-201ENST00000307017 DUSP13Q9UII6 198 aa11.74□□□□□ -0.53
USP38-201ENST00000307017 TACR1P25103 407 aa11.74□□□□□ -0.53
USP38-201ENST00000307017 DAP3P51398 398 aaKnown RBP11.74□□□□□ -0.53
USP38-201ENST00000307017 FBXO7Q9Y3I1 522 aa11.74□□□□□ -0.53
USP38-201ENST00000307017 NPFFR2Q9Y5X5 522 aa11.74□□□□□ -0.53
USP38-201ENST00000307017 E7ESA3 106 aa11.74□□□□□ -0.53
USP38-201ENST00000307017 TERTO14746 1132 aaKnown RBP11.74□□□□□ -0.53
USP38-201ENST00000307017 PCSK6P29122 969 aa11.74□□□□□ -0.53
USP38-201ENST00000307017 TCTAP57738 103 aa11.74□□□□□ -0.53
USP38-201ENST00000307017 PPP2CAP67775 309 aa11.74□□□□□ -0.53
USP38-201ENST00000307017 RAB31Q13636 194 aa11.74□□□□□ -0.53
USP38-201ENST00000307017 LRP10Q7Z4F1 713 aa11.74□□□□□ -0.53
USP38-201ENST00000307017 ZNF511Q8NB15 262 aa11.74□□□□□ -0.53
USP38-201ENST00000307017 EMC6Q9BV81 110 aa11.74□□□□□ -0.53
USP38-201ENST00000307017 MVB12BQ9H7P6 319 aa11.74□□□□□ -0.53
USP38-201ENST00000307017 GPR45Q9Y5Y3 372 aa11.74□□□□□ -0.53
USP38-201ENST00000307017 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.74□□□□□ -0.53
USP38-201ENST00000307017 FITM1A5D6W6 292 aa11.74□□□□□ -0.53
USP38-201ENST00000307017 VEGFDO43915 354 aa11.74□□□□□ -0.53
USP38-201ENST00000307017 HLA-FP30511 346 aa11.74□□□□□ -0.53
USP38-201ENST00000307017 KCNAB1Q14722 419 aa11.74□□□□□ -0.53
USP38-201ENST00000307017 OR51H1Q8NH63 302 aa11.74□□□□□ -0.53
USP38-201ENST00000307017 LRIG1Q96JA1 1093 aa11.74□□□□□ -0.53
USP38-201ENST00000307017 SORCS2Q96PQ0 1159 aa11.74□□□□□ -0.53
USP38-201ENST00000307017 TIMM29Q9BSF4 260 aa11.74□□□□□ -0.53
USP38-201ENST00000307017 AMBRA1Q9C0C7 1298 aa11.74□□□□□ -0.53
USP38-201ENST00000307017 BTNL2Q9UIR0 455 aa11.74□□□□□ -0.53
USP38-201ENST00000307017 BCL9LQ86UU0 1499 aa11.74□□□□□ -0.53
USP38-201ENST00000307017 TRAF3IP2O43734 574 aaPredicted RBP11.73□□□□□ -0.53
USP38-201ENST00000307017 PRAMEF4O60810 478 aa11.73□□□□□ -0.53
USP38-201ENST00000307017 B3GALNT1O75752 331 aa11.73□□□□□ -0.53
USP38-201ENST00000307017 MT-CO2P00403 227 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms