RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 ADGRL4Q9HBW9 690 aa12.35□□□□□ -0.43
CTDP1-202ENST00000299543 TTLL8A6PVC2 850 aa12.35□□□□□ -0.43
CTDP1-202ENST00000299543 BLOC1S5-TXNDC5H3BN57 136 aa12.35□□□□□ -0.43
CTDP1-202ENST00000299543 SEC14L5O43304 696 aa12.35□□□□□ -0.43
CTDP1-202ENST00000299543 IFNGP01579 166 aa12.35□□□□□ -0.43
CTDP1-202ENST00000299543 THBS1P07996 1170 aa12.35□□□□□ -0.43
CTDP1-202ENST00000299543 NGFRP08138 427 aa12.35□□□□□ -0.43
CTDP1-202ENST00000299543 CENPAP49450 140 aa12.35□□□□□ -0.43
CTDP1-202ENST00000299543 AKR1C2P52895 323 aa12.35□□□□□ -0.43
CTDP1-202ENST00000299543 MAT1AQ00266 395 aaKnown RBP12.35□□□□□ -0.43
CTDP1-202ENST00000299543 AKR1C1Q04828 323 aa12.35□□□□□ -0.43
CTDP1-202ENST00000299543 C9orf50Q5SZB4 431 aa12.35□□□□□ -0.43
CTDP1-202ENST00000299543 HES5Q5TA89 166 aa12.35□□□□□ -0.43
CTDP1-202ENST00000299543 NMNAT3Q96T66 252 aa12.35□□□□□ -0.43
CTDP1-202ENST00000299543 ACTR6Q9GZN1 396 aa12.35□□□□□ -0.43
CTDP1-202ENST00000299543 MTIF3Q9H2K0 278 aaKnown RBP12.35□□□□□ -0.43
CTDP1-202ENST00000299543 FOLH1BQ9HBA9 442 aa12.35□□□□□ -0.43
CTDP1-202ENST00000299543 KIF26AQ9ULI4 1882 aaPredicted RBP12.35□□□□□ -0.43
CTDP1-202ENST00000299543 A0A0A6YYC8 382 aaPredicted RBP12.35□□□□□ -0.43
CTDP1-202ENST00000299543 I3L1I5 382 aaPredicted RBP12.35□□□□□ -0.43
CTDP1-202ENST00000299543 CELA2BP08218 269 aaPredicted RBP12.35□□□□□ -0.43
CTDP1-202ENST00000299543 EN2P19622 333 aaPredicted RBP12.35□□□□□ -0.43
CTDP1-202ENST00000299543 MAOBP27338 520 aa12.35□□□□□ -0.43
CTDP1-202ENST00000299543 NFATC4Q14934 902 aa12.35□□□□□ -0.43
CTDP1-202ENST00000299543 POMZP3Q6PJE2 187 aa12.35□□□□□ -0.43
CTDP1-202ENST00000299543 SIAH3Q8IW03 269 aa12.35□□□□□ -0.43
CTDP1-202ENST00000299543 CLRN3Q8NCR9 226 aa12.35□□□□□ -0.43
CTDP1-202ENST00000299543 OR2T4Q8NH00 348 aa12.35□□□□□ -0.43
CTDP1-202ENST00000299543 SPACA7Q96KW9 195 aa12.35□□□□□ -0.43
CTDP1-202ENST00000299543 LMAN2LQ9H0V9 348 aa12.35□□□□□ -0.43
CTDP1-202ENST00000299543 PRDM9Q9NQV7 894 aa12.35□□□□□ -0.43
CTDP1-202ENST00000299543 KLF15Q9UIH9 416 aa12.35□□□□□ -0.43
CTDP1-202ENST00000299543 ACOD1A6NK06 481 aa12.34□□□□□ -0.43
CTDP1-202ENST00000299543 G3V3Q6 166 aa12.34□□□□□ -0.43
CTDP1-202ENST00000299543 ANKRD34CP0C6C1 535 aa12.34□□□□□ -0.43
CTDP1-202ENST00000299543 ATF1P18846 271 aa12.34□□□□□ -0.43
CTDP1-202ENST00000299543 AHCYP23526 432 aa12.34□□□□□ -0.43
CTDP1-202ENST00000299543 ZNHIT3Q15649 155 aaPredicted RBP12.34□□□□□ -0.43
CTDP1-202ENST00000299543 ST3GAL2Q16842 350 aa12.34□□□□□ -0.43
CTDP1-202ENST00000299543 PDSS1Q5T2R2 415 aa12.34□□□□□ -0.43
CTDP1-202ENST00000299543 FIP1L1Q6UN15 594 aaKnown RBP12.34□□□□□ -0.43
CTDP1-202ENST00000299543 C3P1Q6ZMU1 363 aa12.34□□□□□ -0.43
CTDP1-202ENST00000299543 LINGO2Q7L985 606 aa12.34□□□□□ -0.43
CTDP1-202ENST00000299543 TAF8Q7Z7C8 310 aa12.34□□□□□ -0.43
CTDP1-202ENST00000299543 CCDC36Q8IYA8 594 aa12.34□□□□□ -0.43
CTDP1-202ENST00000299543 RNF113BQ8IZP6 322 aaKnown RBP12.34□□□□□ -0.43
CTDP1-202ENST00000299543 KCNJ15Q99712 375 aa12.34□□□□□ -0.43
CTDP1-202ENST00000299543 PBX4Q9BYU1 374 aa12.34□□□□□ -0.43
CTDP1-202ENST00000299543 FKBP7Q9Y680 259 aa12.34□□□□□ -0.43
CTDP1-202ENST00000299543 FLRT2O43155 660 aa12.34□□□□□ -0.43
CTDP1-202ENST00000299543 TRIM3O75382 744 aaPredicted RBP12.34□□□□□ -0.43
CTDP1-202ENST00000299543 HPXP02790 462 aa12.34□□□□□ -0.43
CTDP1-202ENST00000299543 SLC6A6P31641 620 aa12.34□□□□□ -0.43
CTDP1-202ENST00000299543 ACSM1Q08AH1 577 aa12.34□□□□□ -0.43
CTDP1-202ENST00000299543 OTPQ5XKR4 325 aa12.34□□□□□ -0.43
CTDP1-202ENST00000299543 Q6ZSR6 202 aa12.34□□□□□ -0.43
CTDP1-202ENST00000299543 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.34□□□□□ -0.43
CTDP1-202ENST00000299543 ZNF687Q8N1G0 1237 aa12.34□□□□□ -0.43
CTDP1-202ENST00000299543 HSPA12BQ96MM6 686 aa12.34□□□□□ -0.43
CTDP1-202ENST00000299543 DPAGT1Q9H3H5 408 aa12.34□□□□□ -0.43
CTDP1-202ENST00000299543 DUSP22Q9NRW4 184 aa12.34□□□□□ -0.43
CTDP1-202ENST00000299543 COA4Q9NYJ1 87 aa12.34□□□□□ -0.43
CTDP1-202ENST00000299543 FLVCR2Q9UPI3 526 aa12.34□□□□□ -0.43
CTDP1-202ENST00000299543 TMEM5Q9Y2B1 443 aa12.34□□□□□ -0.43
CTDP1-202ENST00000299543 MCIDASD6RGH6 385 aa12.33□□□□□ -0.43
CTDP1-202ENST00000299543 SELENOFO60613 162 aa12.33□□□□□ -0.43
CTDP1-202ENST00000299543 PTHLHP12272 177 aa12.33□□□□□ -0.43
CTDP1-202ENST00000299543 SLC6A1P30531 599 aa12.33□□□□□ -0.43
CTDP1-202ENST00000299543 BTCP35070 178 aa12.33□□□□□ -0.43
CTDP1-202ENST00000299543 ZP1P60852 638 aa12.33□□□□□ -0.43
CTDP1-202ENST00000299543 FAM53BQ14153 422 aa12.33□□□□□ -0.43
CTDP1-202ENST00000299543 OPCMLQ14982 345 aa12.33□□□□□ -0.43
CTDP1-202ENST00000299543 PRICKLE4Q2TBC4 344 aa12.33□□□□□ -0.43
CTDP1-202ENST00000299543 OOSP2Q86WS3 158 aa12.33□□□□□ -0.43
CTDP1-202ENST00000299543 NT5CQ8TCD5 201 aa12.33□□□□□ -0.43
CTDP1-202ENST00000299543 DERL3Q96Q80 235 aa12.33□□□□□ -0.43
CTDP1-202ENST00000299543 C4orf47A7E2U8 309 aa12.33□□□□□ -0.44
CTDP1-202ENST00000299543 C5orf67F2Z3F1 127 aa12.33□□□□□ -0.44
CTDP1-202ENST00000299543 J3QRE1 110 aa12.33□□□□□ -0.44
CTDP1-202ENST00000299543 SMAD9O15198 467 aaKnown RBP12.33□□□□□ -0.44
CTDP1-202ENST00000299543 ARPC5O15511 151 aa12.33□□□□□ -0.44
CTDP1-202ENST00000299543 PLPP2O43688 288 aa12.33□□□□□ -0.44
CTDP1-202ENST00000299543 BRINP1O60477 761 aa12.33□□□□□ -0.44
CTDP1-202ENST00000299543 S100A9P06702 114 aaKnown RBP12.33□□□□□ -0.44
CTDP1-202ENST00000299543 SOX2P48431 317 aa12.33□□□□□ -0.44
CTDP1-202ENST00000299543 KCNJ3P48549 501 aa12.33□□□□□ -0.44
CTDP1-202ENST00000299543 PON3Q15166 354 aa12.33□□□□□ -0.44
CTDP1-202ENST00000299543 ALG11Q2TAA5 492 aa12.33□□□□□ -0.44
CTDP1-202ENST00000299543 ARMC6Q6NXE6 501 aa12.33□□□□□ -0.44
CTDP1-202ENST00000299543 RELL2Q8NC24 303 aaPredicted RBP12.33□□□□□ -0.44
CTDP1-202ENST00000299543 CREB3L1Q96BA8 519 aa12.33□□□□□ -0.44
CTDP1-202ENST00000299543 RASD2Q96D21 266 aa12.33□□□□□ -0.44
CTDP1-202ENST00000299543 TSSK2Q96PF2 358 aa12.33□□□□□ -0.44
CTDP1-202ENST00000299543 FAM60AQ9NP50 221 aa12.33□□□□□ -0.44
CTDP1-202ENST00000299543 DLL4Q9NR61 685 aa12.33□□□□□ -0.44
CTDP1-202ENST00000299543 DTX4Q9Y2E6 619 aa12.33□□□□□ -0.44
CTDP1-202ENST00000299543 SPDEFO95238 335 aa12.33□□□□□ -0.44
CTDP1-202ENST00000299543 HLA-DQB1P01920 261 aa12.33□□□□□ -0.44
CTDP1-202ENST00000299543 TFP02787 698 aa12.33□□□□□ -0.44
CTDP1-202ENST00000299543 NMBP08949 121 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms