RNA–Protein interactions for RNA: ENST00000297268.10

COL1A2-201, Transcript of collagen type I alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A2, Length 5,411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-201ENST00000297268 SEMA4FO95754 770 aa13.17□□□□□ -0.3
COL1A2-201ENST00000297268 UBE2KP61086 200 aa13.17□□□□□ -0.3
COL1A2-201ENST00000297268 EXOSC6Q5RKV6 272 aaKnown RBP13.17□□□□□ -0.3
COL1A2-201ENST00000297268 FAM122BQ7Z309 247 aa13.17□□□□□ -0.3
COL1A2-201ENST00000297268 DPY19L4Q7Z388 723 aa13.17□□□□□ -0.3
COL1A2-201ENST00000297268 PLXDC1Q8IUK5 500 aa13.17□□□□□ -0.3
COL1A2-201ENST00000297268 TMEFF1Q8IYR6 380 aa13.17□□□□□ -0.3
COL1A2-201ENST00000297268 SLC39A11Q8N1S5 342 aa13.17□□□□□ -0.3
COL1A2-201ENST00000297268 PRR18Q8N4B5 295 aa13.17□□□□□ -0.3
COL1A2-201ENST00000297268 FAM26EQ8N5C1 309 aa13.17□□□□□ -0.3
COL1A2-201ENST00000297268 SLC41A2Q96JW4 573 aa13.17□□□□□ -0.3
COL1A2-201ENST00000297268 TMEM68Q96MH6 324 aa13.17□□□□□ -0.3
COL1A2-201ENST00000297268 HINT2Q9BX68 163 aa13.17□□□□□ -0.3
COL1A2-201ENST00000297268 FANCFQ9NPI8 374 aa13.17□□□□□ -0.3
COL1A2-201ENST00000297268 PLEK2Q9NYT0 353 aa13.17□□□□□ -0.3
COL1A2-201ENST00000297268 KLHL13Q9P2N7 655 aa13.17□□□□□ -0.3
COL1A2-201ENST00000297268 AKR7A2O43488 359 aa13.16□□□□□ -0.3
COL1A2-201ENST00000297268 ARL3P36405 182 aa13.16□□□□□ -0.3
COL1A2-201ENST00000297268 ALKBH1Q13686 389 aaKnown RBP13.16□□□□□ -0.3
COL1A2-201ENST00000297268 ACTBL2Q562R1 376 aa13.16□□□□□ -0.3
COL1A2-201ENST00000297268 RTL6Q6ICC9 239 aa13.16□□□□□ -0.3
COL1A2-201ENST00000297268 SLC22A25Q6T423 547 aa13.16□□□□□ -0.3
COL1A2-201ENST00000297268 ZNF100Q8IYN0 542 aa13.16□□□□□ -0.3
COL1A2-201ENST00000297268 OR51D1Q8NGF3 324 aa13.16□□□□□ -0.3
COL1A2-201ENST00000297268 CD300LBA8K4G0 201 aa13.16□□□□□ -0.3
COL1A2-201ENST00000297268 HOXC11O43248 304 aaPredicted RBP13.16□□□□□ -0.3
COL1A2-201ENST00000297268 SLC6A11P48066 632 aa13.16□□□□□ -0.3
COL1A2-201ENST00000297268 BTLAQ7Z6A9 289 aa13.16□□□□□ -0.3
COL1A2-201ENST00000297268 TMEM200AQ86VY9 491 aa13.16□□□□□ -0.3
COL1A2-201ENST00000297268 MCATQ8IVS2 390 aaKnown RBP13.16□□□□□ -0.3
COL1A2-201ENST00000297268 ST8SIA4Q92187 359 aa13.16□□□□□ -0.3
COL1A2-201ENST00000297268 TUBG2Q9NRH3 451 aa13.16□□□□□ -0.3
COL1A2-201ENST00000297268 AKAP11Q9UKA4 1901 aa13.16□□□□□ -0.3
COL1A2-201ENST00000297268 A0A1B0GWA3 101 aa13.16□□□□□ -0.3
COL1A2-201ENST00000297268 HMGN3Q15651 99 aa13.16□□□□□ -0.3
COL1A2-201ENST00000297268 SMAD2Q15796 467 aaKnown RBP13.16□□□□□ -0.3
COL1A2-201ENST00000297268 ACSM5Q6NUN0 579 aa13.16□□□□□ -0.3
COL1A2-201ENST00000297268 NIPAL3Q6P499 406 aa13.16□□□□□ -0.3
COL1A2-201ENST00000297268 EID2Q8N6I1 236 aa13.16□□□□□ -0.3
COL1A2-201ENST00000297268 TERB2Q8NHR7 220 aa13.16□□□□□ -0.3
COL1A2-201ENST00000297268 PHYHIPQ92561 330 aa13.16□□□□□ -0.3
COL1A2-201ENST00000297268 ZNF681Q96N22 645 aa13.16□□□□□ -0.3
COL1A2-201ENST00000297268 CCDC163A0A0D9SF12 145 aa13.16□□□□□ -0.3
COL1A2-201ENST00000297268 CEBPBP17676 345 aa13.16□□□□□ -0.3
COL1A2-201ENST00000297268 FAM160A2Q8N612 972 aaPredicted RBP13.16□□□□□ -0.3
COL1A2-201ENST00000297268 OR9A4Q8NGU2 314 aa13.16□□□□□ -0.3
COL1A2-201ENST00000297268 GIMAP5Q96F15 307 aa13.16□□□□□ -0.3
COL1A2-201ENST00000297268 OR10A5Q9H207 317 aa13.16□□□□□ -0.3
COL1A2-201ENST00000297268 OR10A2Q9H208 303 aa13.16□□□□□ -0.3
COL1A2-201ENST00000297268 WDR76Q9H967 626 aa13.16□□□□□ -0.3
COL1A2-201ENST00000297268 TAAR2Q9P1P5 351 aa13.16□□□□□ -0.3
COL1A2-201ENST00000297268 ITGB2P05107 769 aa13.15□□□□□ -0.3
COL1A2-201ENST00000297268 GIPP09681 153 aaPredicted RBP13.15□□□□□ -0.3
COL1A2-201ENST00000297268 EPHA2P29317 976 aa13.15□□□□□ -0.3
COL1A2-201ENST00000297268 SEC61A1P61619 476 aaKnown RBP13.15□□□□□ -0.3
COL1A2-201ENST00000297268 DGCR2P98153 550 aa13.15□□□□□ -0.3
COL1A2-201ENST00000297268 POU3F1Q03052 451 aaPredicted RBP13.15□□□□□ -0.3
COL1A2-201ENST00000297268 ERV3-1Q14264 604 aa13.15□□□□□ -0.3
COL1A2-201ENST00000297268 DCLRE1CQ96SD1 692 aaKnown RBP13.15□□□□□ -0.3
COL1A2-201ENST00000297268 PRSS16Q9NQE7 514 aa13.15□□□□□ -0.3
COL1A2-201ENST00000297268 RPH3AQ9Y2J0 694 aaPredicted RBP13.15□□□□□ -0.3
COL1A2-201ENST00000297268 ALS2Q96Q42 1657 aa13.15□□□□□ -0.3
COL1A2-201ENST00000297268 KLK8O60259 260 aa13.15□□□□□ -0.3
COL1A2-201ENST00000297268 KCNK2O95069 426 aa13.15□□□□□ -0.3
COL1A2-201ENST00000297268 MAOBP27338 520 aa13.15□□□□□ -0.3
COL1A2-201ENST00000297268 BAK1Q16611 211 aa13.15□□□□□ -0.3
COL1A2-201ENST00000297268 C17orf99Q6UX52 265 aa13.15□□□□□ -0.3
COL1A2-201ENST00000297268 ZNF836Q6ZNA1 936 aa13.15□□□□□ -0.3
COL1A2-201ENST00000297268 ZNF765Q7L2R6 523 aa13.15□□□□□ -0.3
COL1A2-201ENST00000297268 BBS1Q8NFJ9 593 aa13.15□□□□□ -0.3
COL1A2-201ENST00000297268 OR13C9Q8NGT0 318 aa13.15□□□□□ -0.3
COL1A2-201ENST00000297268 CHST2Q9Y4C5 530 aa13.15□□□□□ -0.3
COL1A2-201ENST00000297268 DDX60Q8IY21 1712 aaKnown RBP13.15□□□□□ -0.3
COL1A2-201ENST00000297268 PRSS38A1L453 326 aa13.15□□□□□ -0.3
COL1A2-201ENST00000297268 APEHP13798 732 aaKnown RBP13.15□□□□□ -0.3
COL1A2-201ENST00000297268 CLDN20P56880 219 aa13.15□□□□□ -0.3
COL1A2-201ENST00000297268 FAHD1Q6P587 224 aa13.15□□□□□ -0.3
COL1A2-201ENST00000297268 NKAIN4Q8IVV8 208 aa13.15□□□□□ -0.3
COL1A2-201ENST00000297268 OR10R2Q8NGX6 335 aa13.15□□□□□ -0.3
COL1A2-201ENST00000297268 ARL5BQ96KC2 179 aa13.15□□□□□ -0.3
COL1A2-201ENST00000297268 PDCD1LG2Q9BQ51 273 aa13.15□□□□□ -0.3
COL1A2-201ENST00000297268 ZNF28P17035 718 aa13.15□□□□□ -0.3
COL1A2-201ENST00000297268 RPL34P49207 117 aaKnown RBP13.15□□□□□ -0.3
COL1A2-201ENST00000297268 CTBSQ01459 385 aa13.15□□□□□ -0.3
COL1A2-201ENST00000297268 CNN3Q15417 329 aaKnown RBP13.15□□□□□ -0.3
COL1A2-201ENST00000297268 ZNF511Q8NB15 262 aa13.15□□□□□ -0.3
COL1A2-201ENST00000297268 FAM3DQ96BQ1 224 aa13.15□□□□□ -0.3
COL1A2-201ENST00000297268 POFUT1Q9H488 388 aa13.15□□□□□ -0.3
COL1A2-201ENST00000297268 SPATA6Q9NWH7 488 aaPredicted RBP13.15□□□□□ -0.3
COL1A2-201ENST00000297268 C1orf123Q9NWV4 160 aa13.15□□□□□ -0.3
COL1A2-201ENST00000297268 CDC14CA4D256 554 aa13.14□□□□□ -0.31
COL1A2-201ENST00000297268 FTCDNL1E5RQL4 147 aa13.14□□□□□ -0.31
COL1A2-201ENST00000297268 SELENOFO60613 162 aa13.14□□□□□ -0.31
COL1A2-201ENST00000297268 ITGB8P26012 769 aa13.14□□□□□ -0.31
COL1A2-201ENST00000297268 GZMKP49863 264 aa13.14□□□□□ -0.31
COL1A2-201ENST00000297268 MPEG1Q2M385 716 aa13.14□□□□□ -0.31
COL1A2-201ENST00000297268 HIST2H3PS2Q5TEC6 136 aa13.14□□□□□ -0.31
COL1A2-201ENST00000297268 Q6ZTK2 550 aa13.14□□□□□ -0.31
COL1A2-201ENST00000297268 VASH1Q7L8A9 365 aaPredicted RBP13.14□□□□□ -0.31
COL1A2-201ENST00000297268 GLCCI1Q86VQ1 547 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms