RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 PPICP45877 212 aa17.1■□□□□ 0.33
PCDH1-201ENST00000287008 CAV2P51636 162 aa17.1■□□□□ 0.33
PCDH1-201ENST00000287008 EXOSC6Q5RKV6 272 aaKnown RBP17.1■□□□□ 0.33
PCDH1-201ENST00000287008 OR2G6Q5TZ20 316 aa17.1■□□□□ 0.33
PCDH1-201ENST00000287008 COX15Q7KZN9 410 aa17.1■□□□□ 0.33
PCDH1-201ENST00000287008 CD300LFQ8TDQ1 290 aa17.1■□□□□ 0.33
PCDH1-201ENST00000287008 MAELQ96JY0 434 aaKnown RBP17.1■□□□□ 0.33
PCDH1-201ENST00000287008 GPR78Q96P69 363 aa17.1■□□□□ 0.33
PCDH1-201ENST00000287008 RPP25Q9BUL9 199 aaKnown RBP17.1■□□□□ 0.33
PCDH1-201ENST00000287008 OR51B4Q9Y5P0 310 aa17.1■□□□□ 0.33
PCDH1-201ENST00000287008 LILRA5A6NI73 299 aa17.1■□□□□ 0.33
PCDH1-201ENST00000287008 LYRM1O43325 122 aa17.1■□□□□ 0.33
PCDH1-201ENST00000287008 GPR3P46089 330 aa17.1■□□□□ 0.33
PCDH1-201ENST00000287008 ASTLQ6HA08 431 aaPredicted RBP17.1■□□□□ 0.33
PCDH1-201ENST00000287008 OLIG3Q7RTU3 272 aa17.1■□□□□ 0.33
PCDH1-201ENST00000287008 ZNF687Q8N1G0 1237 aa17.1■□□□□ 0.33
PCDH1-201ENST00000287008 OR6F1Q8NGZ6 308 aa17.1■□□□□ 0.33
PCDH1-201ENST00000287008 A0A1B0GUL6 1792 aa17.1■□□□□ 0.33
PCDH1-201ENST00000287008 WNT11O96014 354 aa17.1■□□□□ 0.33
PCDH1-201ENST00000287008 CXADRP78310 365 aa17.1■□□□□ 0.33
PCDH1-201ENST00000287008 XKR7Q5GH72 579 aa17.1■□□□□ 0.33
PCDH1-201ENST00000287008 ASB12Q8WXK4 309 aa17.1■□□□□ 0.33
PCDH1-201ENST00000287008 SARAFQ96BY9 339 aa17.1■□□□□ 0.33
PCDH1-201ENST00000287008 LINC00615Q96LM1 132 aaPredicted RBP17.1■□□□□ 0.33
PCDH1-201ENST00000287008 SORCS2Q96PQ0 1159 aa17.1■□□□□ 0.33
PCDH1-201ENST00000287008 MLXQ9UH92 298 aa17.1■□□□□ 0.33
PCDH1-201ENST00000287008 CX3CR1P49238 355 aa17.09■□□□□ 0.33
PCDH1-201ENST00000287008 TAS2R31P59538 309 aa17.09■□□□□ 0.33
PCDH1-201ENST00000287008 AGAP7PQ5VUJ5 663 aa17.09■□□□□ 0.33
PCDH1-201ENST00000287008 LILRB2Q8N423 598 aa17.09■□□□□ 0.33
PCDH1-201ENST00000287008 KIAA1958Q8N8K9 716 aa17.09■□□□□ 0.33
PCDH1-201ENST00000287008 MZB1Q8WU39 189 aa17.09■□□□□ 0.33
PCDH1-201ENST00000287008 GGHQ92820 318 aa17.09■□□□□ 0.33
PCDH1-201ENST00000287008 AGAP4Q96P64 663 aa17.09■□□□□ 0.33
PCDH1-201ENST00000287008 MUTYHQ9UIF7 546 aa17.09■□□□□ 0.33
PCDH1-201ENST00000287008 SLC17A4Q9Y2C5 497 aa17.09■□□□□ 0.33
PCDH1-201ENST00000287008 YARS2Q9Y2Z4 477 aaKnown RBP17.09■□□□□ 0.33
PCDH1-201ENST00000287008 TNRC6CQ9HCJ0 1690 aaKnown RBP17.09■□□□□ 0.33
PCDH1-201ENST00000287008 TMEM212A6NML5 194 aa17.09■□□□□ 0.33
PCDH1-201ENST00000287008 D6RAR5 112 aa17.09■□□□□ 0.33
PCDH1-201ENST00000287008 MBTPS2O43462 519 aa17.09■□□□□ 0.33
PCDH1-201ENST00000287008 FPR3P25089 353 aa17.09■□□□□ 0.33
PCDH1-201ENST00000287008 APOBEC1P41238 236 aaKnown RBP17.09■□□□□ 0.33
PCDH1-201ENST00000287008 FOXK2Q01167 660 aa17.09■□□□□ 0.33
PCDH1-201ENST00000287008 YRDCQ86U90 279 aaKnown RBP17.09■□□□□ 0.33
PCDH1-201ENST00000287008 SDF2Q99470 211 aa17.09■□□□□ 0.33
PCDH1-201ENST00000287008 ZPBPQ9BS86 351 aa17.09■□□□□ 0.33
PCDH1-201ENST00000287008 WDR76Q9H967 626 aa17.09■□□□□ 0.33
PCDH1-201ENST00000287008 CHRNA9Q9UGM1 479 aa17.09■□□□□ 0.33
PCDH1-201ENST00000287008 LRP5O75197 1615 aa17.09■□□□□ 0.33
PCDH1-201ENST00000287008 HMX2A2RU54 273 aa17.09■□□□□ 0.33
PCDH1-201ENST00000287008 STT3AP46977 705 aa17.09■□□□□ 0.33
PCDH1-201ENST00000287008 EMX1Q04741 257 aaPredicted RBP17.09■□□□□ 0.33
PCDH1-201ENST00000287008 HTR4Q13639 388 aa17.09■□□□□ 0.33
PCDH1-201ENST00000287008 GLYR1Q49A26 553 aaPredicted RBP17.09■□□□□ 0.33
PCDH1-201ENST00000287008 B3GLCTQ6Y288 498 aa17.09■□□□□ 0.33
PCDH1-201ENST00000287008 CADM4Q8NFZ8 388 aa17.09■□□□□ 0.33
PCDH1-201ENST00000287008 TMEM255BQ8WV15 326 aa17.09■□□□□ 0.33
PCDH1-201ENST00000287008 PCDHGA1Q9Y5H4 931 aa17.09■□□□□ 0.33
PCDH1-201ENST00000287008 A0A087WUU8 490 aa17.09■□□□□ 0.33
PCDH1-201ENST00000287008 CCDC187A0A096LP49 1063 aa17.09■□□□□ 0.33
PCDH1-201ENST00000287008 IFNA1P01562 189 aa17.09■□□□□ 0.33
PCDH1-201ENST00000287008 TK1P04183 234 aa17.09■□□□□ 0.33
PCDH1-201ENST00000287008 TFPTP0C1Z6 253 aa17.09■□□□□ 0.33
PCDH1-201ENST00000287008 ELAVL4P26378 380 aaKnown RBP17.09■□□□□ 0.33
PCDH1-201ENST00000287008 POLR2IP36954 125 aaKnown RBP17.09■□□□□ 0.33
PCDH1-201ENST00000287008 MPLP40238 635 aa17.09■□□□□ 0.33
PCDH1-201ENST00000287008 SMN1Q16637 294 aaKnown RBP17.09■□□□□ 0.33
PCDH1-201ENST00000287008 OR2A1Q8NGT9 310 aa17.09■□□□□ 0.33
PCDH1-201ENST00000287008 TSLPQ969D9 159 aa17.09■□□□□ 0.33
PCDH1-201ENST00000287008 ZC3H10Q96K80 434 aaKnown RBP17.09■□□□□ 0.33
PCDH1-201ENST00000287008 IL2RAP01589 272 aa17.08■□□□□ 0.33
PCDH1-201ENST00000287008 EPHA1P21709 976 aa17.08■□□□□ 0.33
PCDH1-201ENST00000287008 GABREP78334 506 aa17.08■□□□□ 0.33
PCDH1-201ENST00000287008 SLC10A1Q14973 349 aa17.08■□□□□ 0.33
PCDH1-201ENST00000287008 MORN4Q8NDC4 146 aa17.08■□□□□ 0.33
PCDH1-201ENST00000287008 PRRT1Q99946 306 aa17.08■□□□□ 0.33
PCDH1-201ENST00000287008 CMSS1Q9BQ75 279 aaKnown RBP17.08■□□□□ 0.33
PCDH1-201ENST00000287008 SEMA4CQ9C0C4 833 aa17.08■□□□□ 0.33
PCDH1-201ENST00000287008 CRISPLD2Q9H0B8 497 aa17.08■□□□□ 0.33
PCDH1-201ENST00000287008 PLEKHA3Q9HB20 300 aa17.08■□□□□ 0.33
PCDH1-201ENST00000287008 MYOTQ9UBF9 498 aa17.08■□□□□ 0.33
PCDH1-201ENST00000287008 OR8U9P0C7N5 309 aa17.08■□□□□ 0.32
PCDH1-201ENST00000287008 CRHBPP24387 322 aa17.08■□□□□ 0.32
PCDH1-201ENST00000287008 NXNL2Q5VZ03 156 aa17.08■□□□□ 0.32
PCDH1-201ENST00000287008 FAM109BQ6ICB4 259 aaPredicted RBP17.08■□□□□ 0.32
PCDH1-201ENST00000287008 OR1N1Q8NGS0 311 aa17.08■□□□□ 0.32
PCDH1-201ENST00000287008 OR1S1Q8NH92 325 aa17.08■□□□□ 0.32
PCDH1-201ENST00000287008 CCDC74BQ96LY2 380 aa17.08■□□□□ 0.32
PCDH1-201ENST00000287008 C12orf49Q9H741 205 aa17.08■□□□□ 0.32
PCDH1-201ENST00000287008 FUOMA2VDF0 154 aa17.08■□□□□ 0.32
PCDH1-201ENST00000287008 TSPAN4O14817 238 aa17.08■□□□□ 0.32
PCDH1-201ENST00000287008 LCMT2O60294 686 aaKnown RBP17.08■□□□□ 0.32
PCDH1-201ENST00000287008 AKAIN1P0CW23 69 aa17.08■□□□□ 0.32
PCDH1-201ENST00000287008 ETV5P41161 510 aa17.08■□□□□ 0.32
PCDH1-201ENST00000287008 MEF2DQ14814 521 aa17.08■□□□□ 0.32
PCDH1-201ENST00000287008 TPRA1Q86W33 373 aa17.08■□□□□ 0.32
PCDH1-201ENST00000287008 KIF18BQ86Y91 864 aa17.08■□□□□ 0.32
PCDH1-201ENST00000287008 MAML2Q8IZL2 1156 aaPredicted RBP17.08■□□□□ 0.32
PCDH1-201ENST00000287008 SLC43A2Q8N370 569 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms