RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 STPG1Q5TH74 334 aa8.47□□□□□ -1.05
SSR3-201ENST00000265044 TUBA1AQ71U36 451 aa8.47□□□□□ -1.05
SSR3-201ENST00000265044 DACT3Q96B18 629 aaPredicted RBP8.47□□□□□ -1.05
SSR3-201ENST00000265044 PHF21AQ96BD5 680 aa8.47□□□□□ -1.05
SSR3-201ENST00000265044 C4orf36Q96KX1 117 aa8.47□□□□□ -1.05
SSR3-201ENST00000265044 PSD2Q9BQI7 771 aa8.47□□□□□ -1.05
SSR3-201ENST00000265044 ALG12Q9BV10 488 aa8.47□□□□□ -1.05
SSR3-201ENST00000265044 SLITRK2Q9H156 845 aa8.47□□□□□ -1.05
SSR3-201ENST00000265044 SACM1LQ9NTJ5 587 aa8.47□□□□□ -1.05
SSR3-201ENST00000265044 SEMA5BQ9P283 1151 aa8.47□□□□□ -1.05
SSR3-201ENST00000265044 CLDN16Q9Y5I7 305 aa8.47□□□□□ -1.05
SSR3-201ENST00000265044 WIF1Q9Y5W5 379 aa8.47□□□□□ -1.05
SSR3-201ENST00000265044 HS3ST3B1Q9Y662 390 aa8.47□□□□□ -1.05
SSR3-201ENST00000265044 TRBV2A0A0J9YWF9 115 aa8.47□□□□□ -1.05
SSR3-201ENST00000265044 A0A1W2PPL8 197 aa8.47□□□□□ -1.05
SSR3-201ENST00000265044 NPIPA2E9PIF3 369 aa8.47□□□□□ -1.05
SSR3-201ENST00000265044 NPIPA3F8WFD2 350 aa8.47□□□□□ -1.05
SSR3-201ENST00000265044 APOA1P02647 267 aa8.47□□□□□ -1.05
SSR3-201ENST00000265044 AZGP1P25311 298 aaKnown RBP8.47□□□□□ -1.05
SSR3-201ENST00000265044 MSX1P28360 303 aa8.47□□□□□ -1.05
SSR3-201ENST00000265044 SOX18P35713 384 aa8.47□□□□□ -1.05
SSR3-201ENST00000265044 TGFBR1P36897 503 aa8.47□□□□□ -1.05
SSR3-201ENST00000265044 TALDO1P37837 337 aa8.47□□□□□ -1.05
SSR3-201ENST00000265044 MAP3K8P41279 467 aa8.47□□□□□ -1.05
SSR3-201ENST00000265044 DNASE1L1P49184 302 aa8.47□□□□□ -1.05
SSR3-201ENST00000265044 RORCP51449 518 aa8.47□□□□□ -1.05
SSR3-201ENST00000265044 ZFP36L1Q07352 338 aaKnown RBP8.47□□□□□ -1.05
SSR3-201ENST00000265044 CHAF1BQ13112 559 aa8.47□□□□□ -1.05
SSR3-201ENST00000265044 OTPQ5XKR4 325 aa8.47□□□□□ -1.05
SSR3-201ENST00000265044 UEVLDQ8IX04 471 aa8.47□□□□□ -1.05
SSR3-201ENST00000265044 GPALPP1Q8IXQ4 340 aa8.47□□□□□ -1.05
SSR3-201ENST00000265044 NEIL3Q8TAT5 605 aa8.47□□□□□ -1.05
SSR3-201ENST00000265044 CENPOQ9BU64 300 aa8.47□□□□□ -1.05
SSR3-201ENST00000265044 CDCA4Q9BXL8 241 aa8.47□□□□□ -1.05
SSR3-201ENST00000265044 NBASA2RRP1 2371 aa8.47□□□□□ -1.05
SSR3-201ENST00000265044 PSMB10P40306 273 aa8.46□□□□□ -1.05
SSR3-201ENST00000265044 RFC3P40938 356 aa8.46□□□□□ -1.05
SSR3-201ENST00000265044 APOBEC1P41238 236 aaKnown RBP8.46□□□□□ -1.05
SSR3-201ENST00000265044 BMXP51813 675 aa8.46□□□□□ -1.05
SSR3-201ENST00000265044 INSM1Q01101 510 aaPredicted RBP8.46□□□□□ -1.05
SSR3-201ENST00000265044 TEKQ02763 1124 aa8.46□□□□□ -1.05
SSR3-201ENST00000265044 SSPNQ14714 243 aa8.46□□□□□ -1.05
SSR3-201ENST00000265044 ZNF846Q147U1 533 aa8.46□□□□□ -1.05
SSR3-201ENST00000265044 INPP5JQ15735 1006 aaPredicted RBP8.46□□□□□ -1.05
SSR3-201ENST00000265044 GPR139Q6DWJ6 353 aa8.46□□□□□ -1.05
SSR3-201ENST00000265044 PLEKHG7Q6ZR37 379 aa8.46□□□□□ -1.05
SSR3-201ENST00000265044 MCEMP1Q8IX19 187 aa8.46□□□□□ -1.05
SSR3-201ENST00000265044 SLC35F2Q8IXU6 374 aa8.46□□□□□ -1.05
SSR3-201ENST00000265044 S100ZQ8WXG8 99 aa8.46□□□□□ -1.05
SSR3-201ENST00000265044 BORCS5Q969J3 196 aa8.46□□□□□ -1.05
SSR3-201ENST00000265044 UTP23Q9BRU9 249 aaKnown RBP8.46□□□□□ -1.05
SSR3-201ENST00000265044 EMC6Q9BV81 110 aa8.46□□□□□ -1.05
SSR3-201ENST00000265044 RNF167Q9H6Y7 350 aa8.46□□□□□ -1.05
SSR3-201ENST00000265044 LRFN1Q9P244 771 aa8.46□□□□□ -1.05
SSR3-201ENST00000265044 STUB1Q9UNE7 303 aa8.46□□□□□ -1.05
SSR3-201ENST00000265044 MAGEB4O15481 346 aaPredicted RBP8.46□□□□□ -1.05
SSR3-201ENST00000265044 CD59P13987 128 aa8.46□□□□□ -1.05
SSR3-201ENST00000265044 NAGAP17050 411 aa8.46□□□□□ -1.05
SSR3-201ENST00000265044 RPS27P42677 84 aaKnown RBP8.46□□□□□ -1.05
SSR3-201ENST00000265044 ADAM8P78325 824 aa8.46□□□□□ -1.05
SSR3-201ENST00000265044 ARG2P78540 354 aa8.46□□□□□ -1.05
SSR3-201ENST00000265044 PUDPQ08623 228 aa8.46□□□□□ -1.05
SSR3-201ENST00000265044 UBE2UQ5VVX9 321 aa8.46□□□□□ -1.05
SSR3-201ENST00000265044 NIPAL3Q6P499 406 aa8.46□□□□□ -1.05
SSR3-201ENST00000265044 SLC46A3Q7Z3Q1 461 aa8.46□□□□□ -1.05
SSR3-201ENST00000265044 ATG4DQ86TL0 474 aaPredicted RBP8.46□□□□□ -1.05
SSR3-201ENST00000265044 YRDCQ86U90 279 aaKnown RBP8.46□□□□□ -1.05
SSR3-201ENST00000265044 PM20D2Q8IYS1 436 aa8.46□□□□□ -1.05
SSR3-201ENST00000265044 CLDN22Q8N7P3 220 aa8.46□□□□□ -1.05
SSR3-201ENST00000265044 NANOGP1Q8N7R0 232 aa8.46□□□□□ -1.05
SSR3-201ENST00000265044 TSEN15Q8WW01 171 aaKnown RBP8.46□□□□□ -1.05
SSR3-201ENST00000265044 ST8SIA1Q92185 356 aa8.46□□□□□ -1.05
SSR3-201ENST00000265044 AP3S1Q92572 193 aa8.46□□□□□ -1.05
SSR3-201ENST00000265044 SLC35B4Q969S0 331 aa8.46□□□□□ -1.05
SSR3-201ENST00000265044 DTNBP1Q96EV8 351 aa8.46□□□□□ -1.05
SSR3-201ENST00000265044 DIRAS2Q96HU8 199 aa8.46□□□□□ -1.05
SSR3-201ENST00000265044 CCNL2Q96S94 520 aaPredicted RBP8.46□□□□□ -1.05
SSR3-201ENST00000265044 BABAM2Q9NXR7 383 aa8.46□□□□□ -1.05
SSR3-201ENST00000265044 B4GALT7Q9UBV7 327 aa8.46□□□□□ -1.05
SSR3-201ENST00000265044 DAPK2Q9UIK4 370 aa8.46□□□□□ -1.05
SSR3-201ENST00000265044 ZNF346Q9UL40 294 aaKnown RBP8.46□□□□□ -1.05
SSR3-201ENST00000265044 PCDHGB2Q9Y5G2 931 aa8.46□□□□□ -1.05
SSR3-201ENST00000265044 MPDZO75970 2070 aa8.46□□□□□ -1.06
SSR3-201ENST00000265044 TMEM72A0PK05 275 aa8.46□□□□□ -1.06
SSR3-201ENST00000265044 ARGFXA6NJG6 315 aa8.46□□□□□ -1.06
SSR3-201ENST00000265044 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.46□□□□□ -1.06
SSR3-201ENST00000265044 LOC110117498-PIK3R3F6TDL0 507 aa8.46□□□□□ -1.06
SSR3-201ENST00000265044 NGFRP08138 427 aa8.46□□□□□ -1.06
SSR3-201ENST00000265044 SBK2P0C263 348 aa8.46□□□□□ -1.06
SSR3-201ENST00000265044 PIPP12273 146 aaPredicted RBP8.46□□□□□ -1.06
SSR3-201ENST00000265044 SOX2P48431 317 aa8.46□□□□□ -1.06
SSR3-201ENST00000265044 MLLT11Q13015 90 aaPredicted RBP8.46□□□□□ -1.06
SSR3-201ENST00000265044 HNRNPA0Q13151 305 aaKnown RBP8.46□□□□□ -1.06
SSR3-201ENST00000265044 ACKR1Q16570 336 aa8.46□□□□□ -1.06
SSR3-201ENST00000265044 AP1ARQ63HQ0 302 aa8.46□□□□□ -1.06
SSR3-201ENST00000265044 KLHL24Q6TFL4 600 aa8.46□□□□□ -1.06
SSR3-201ENST00000265044 DPY19L4Q7Z388 723 aa8.46□□□□□ -1.06
SSR3-201ENST00000265044 PLCZ1Q86YW0 608 aa8.46□□□□□ -1.06
SSR3-201ENST00000265044 TMEM99Q8N816 258 aa8.46□□□□□ -1.06
SSR3-201ENST00000265044 FER1L6-AS2Q96M78 137 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms