RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 CPAMD8Q8IZJ3 1885 aa25.06■■□□□ 1.6
CCM2-201ENST00000258781 OR6C68A6NDL8 312 aa25.06■■□□□ 1.6
CCM2-201ENST00000258781 J3QRK9 145 aa25.06■■□□□ 1.6
CCM2-201ENST00000258781 BMP4P12644 408 aa25.06■■□□□ 1.6
CCM2-201ENST00000258781 MSX1P28360 303 aa25.06■■□□□ 1.6
CCM2-201ENST00000258781 DIO1P49895 249 aa25.06■■□□□ 1.6
CCM2-201ENST00000258781 SLC25A1P53007 311 aa25.06■■□□□ 1.6
CCM2-201ENST00000258781 FAM69AQ5T7M9 428 aa25.06■■□□□ 1.6
CCM2-201ENST00000258781 C16orf87Q6PH81 154 aa25.06■■□□□ 1.6
CCM2-201ENST00000258781 JAZF1Q86VZ6 243 aa25.06■■□□□ 1.6
CCM2-201ENST00000258781 KLBQ86Z14 1044 aa25.06■■□□□ 1.6
CCM2-201ENST00000258781 LSM14AQ8ND56 463 aaKnown RBP25.06■■□□□ 1.6
CCM2-201ENST00000258781 ATP6V1C2Q8NEY4 427 aa25.06■■□□□ 1.6
CCM2-201ENST00000258781 RASL10BQ96S79 203 aa25.06■■□□□ 1.6
CCM2-201ENST00000258781 CNN2Q99439 309 aaKnown RBP25.06■■□□□ 1.6
CCM2-201ENST00000258781 ISG20L2Q9H9L3 353 aaKnown RBP25.06■■□□□ 1.6
CCM2-201ENST00000258781 GALNT9Q9HCQ5 603 aa25.06■■□□□ 1.6
CCM2-201ENST00000258781 BABAM2Q9NXR7 383 aa25.06■■□□□ 1.6
CCM2-201ENST00000258781 KLRF1Q9NZS2 232 aa25.06■■□□□ 1.6
CCM2-201ENST00000258781 IGLV3-32A0A0A0MS00 114 aa25.05■■□□□ 1.6
CCM2-201ENST00000258781 PNMA8CA0A1B0GUJ8 204 aa25.05■■□□□ 1.6
CCM2-201ENST00000258781 IGHEP01854 428 aa25.05■■□□□ 1.6
CCM2-201ENST00000258781 CEACAM1P13688 526 aa25.05■■□□□ 1.6
CCM2-201ENST00000258781 SPI1P17947 270 aa25.05■■□□□ 1.6
CCM2-201ENST00000258781 FGF9P31371 208 aaPredicted RBP25.05■■□□□ 1.6
CCM2-201ENST00000258781 FOLR3P41439 243 aa25.05■■□□□ 1.6
CCM2-201ENST00000258781 NOVA1P51513 510 aaKnown RBP25.05■■□□□ 1.6
CCM2-201ENST00000258781 DBPQ10586 325 aaPredicted RBP25.05■■□□□ 1.6
CCM2-201ENST00000258781 C1orf140Q5VVS0 124 aa25.05■■□□□ 1.6
CCM2-201ENST00000258781 GPR139Q6DWJ6 353 aa25.05■■□□□ 1.6
CCM2-201ENST00000258781 GPALPP1Q8IXQ4 340 aa25.05■■□□□ 1.6
CCM2-201ENST00000258781 M1APQ8TC57 530 aa25.05■■□□□ 1.6
CCM2-201ENST00000258781 TMEM203Q969S6 136 aa25.05■■□□□ 1.6
CCM2-201ENST00000258781 SPACA9Q96E40 222 aaPredicted RBP25.05■■□□□ 1.6
CCM2-201ENST00000258781 C1GALT1C1Q96EU7 318 aa25.05■■□□□ 1.6
CCM2-201ENST00000258781 SDHAF3Q9NRP4 125 aa25.05■■□□□ 1.6
CCM2-201ENST00000258781 ASB6Q9NWX5 421 aa25.05■■□□□ 1.6
CCM2-201ENST00000258781 NOX1Q9Y5S8 564 aa25.05■■□□□ 1.6
CCM2-201ENST00000258781 TNFSF12-TNFSF13A0A0A6YY99 330 aa25.04■■□□□ 1.6
CCM2-201ENST00000258781 A0A1W2PQ72 361 aa25.04■■□□□ 1.6
CCM2-201ENST00000258781 WISP1O95388 367 aa25.04■■□□□ 1.6
CCM2-201ENST00000258781 MT-ND5P03915 603 aa25.04■■□□□ 1.6
CCM2-201ENST00000258781 PRKCAP17252 672 aa25.04■■□□□ 1.6
CCM2-201ENST00000258781 LEG1Q6P5S2 330 aa25.04■■□□□ 1.6
CCM2-201ENST00000258781 C6orf15Q6UXA7 325 aaPredicted RBP25.04■■□□□ 1.6
CCM2-201ENST00000258781 ZFP41Q8N8Y5 198 aa25.04■■□□□ 1.6
CCM2-201ENST00000258781 OR6S1Q8NH40 331 aa25.04■■□□□ 1.6
CCM2-201ENST00000258781 ZMYND19Q96E35 227 aaPredicted RBP25.04■■□□□ 1.6
CCM2-201ENST00000258781 YARS2Q9Y2Z4 477 aaKnown RBP25.04■■□□□ 1.6
CCM2-201ENST00000258781 PCDHGB7Q9Y5F8 929 aa25.04■■□□□ 1.6
CCM2-201ENST00000258781 A0A1B0GVG6 124 aa25.04■■□□□ 1.6
CCM2-201ENST00000258781 TRDV1A0A1B0GX56 115 aa25.04■■□□□ 1.6
CCM2-201ENST00000258781 ZNF85Q03923 595 aa25.04■■□□□ 1.6
CCM2-201ENST00000258781 SGCBQ16585 318 aa25.04■■□□□ 1.6
CCM2-201ENST00000258781 ZNF800Q2TB10 664 aaPredicted RBP eCLIP25.04■■□□□ 1.6
CCM2-201ENST00000258781 CRTC2Q53ET0 693 aaPredicted RBP25.04■■□□□ 1.6
CCM2-201ENST00000258781 C1QL3Q5VWW1 255 aa25.04■■□□□ 1.6
CCM2-201ENST00000258781 C6orf62Q9GZU0 229 aaPredicted RBP25.04■■□□□ 1.6
CCM2-201ENST00000258781 TRIM36Q9NQ86 728 aa25.04■■□□□ 1.6
CCM2-201ENST00000258781 PPP4R1LQ9P1A2 415 aa25.04■■□□□ 1.6
CCM2-201ENST00000258781 PADI1Q9ULC6 663 aa25.04■■□□□ 1.6
CCM2-201ENST00000258781 A0A075B6Q4 140 aa25.03■■□□□ 1.6
CCM2-201ENST00000258781 ETV2O00321 342 aaPredicted RBP25.03■■□□□ 1.6
CCM2-201ENST00000258781 TNFSF15O95150 251 aa25.03■■□□□ 1.6
CCM2-201ENST00000258781 IL1AP01583 271 aa25.03■■□□□ 1.6
CCM2-201ENST00000258781 OR2T7P0C7T2 308 aa25.03■■□□□ 1.6
CCM2-201ENST00000258781 CELP19835 753 aa25.03■■□□□ 1.6
CCM2-201ENST00000258781 RPS19P39019 145 aaKnown RBP25.03■■□□□ 1.6
CCM2-201ENST00000258781 PTGDSP41222 190 aa25.03■■□□□ 1.6
CCM2-201ENST00000258781 CDKN2AP42771 156 aaKnown RBP25.03■■□□□ 1.6
CCM2-201ENST00000258781 INAQ16352 499 aa25.03■■□□□ 1.6
CCM2-201ENST00000258781 TMEM164Q5U3C3 297 aa25.03■■□□□ 1.6
CCM2-201ENST00000258781 OR5M10Q6IEU7 315 aa25.03■■□□□ 1.6
CCM2-201ENST00000258781 OR10G3Q8NGC4 313 aa25.03■■□□□ 1.6
CCM2-201ENST00000258781 OR2T27Q8NH04 317 aa25.03■■□□□ 1.6
CCM2-201ENST00000258781 ZPLD1Q8TCW7 415 aa25.03■■□□□ 1.6
CCM2-201ENST00000258781 KCTD7Q96MP8 289 aa25.03■■□□□ 1.6
CCM2-201ENST00000258781 METTL7AQ9H8H3 244 aa25.03■■□□□ 1.6
CCM2-201ENST00000258781 GRHPRQ9UBQ7 328 aa25.03■■□□□ 1.6
CCM2-201ENST00000258781 GSTK1Q9Y2Q3 226 aa25.03■■□□□ 1.6
CCM2-201ENST00000258781 PEX16Q9Y5Y5 336 aa25.03■■□□□ 1.6
CCM2-201ENST00000258781 C2orf72A6NCS6 295 aa25.02■■□□□ 1.6
CCM2-201ENST00000258781 OR2T1O43869 369 aa25.02■■□□□ 1.6
CCM2-201ENST00000258781 AHSA1O95433 338 aa25.02■■□□□ 1.6
CCM2-201ENST00000258781 HLA-DPB1P04440 258 aa25.02■■□□□ 1.6
CCM2-201ENST00000258781 F13BP05160 661 aa25.02■■□□□ 1.6
CCM2-201ENST00000258781 GAAP10253 952 aa25.02■■□□□ 1.6
CCM2-201ENST00000258781 GALP22466 123 aa25.02■■□□□ 1.6
CCM2-201ENST00000258781 APOBEC1P41238 236 aaKnown RBP25.02■■□□□ 1.6
CCM2-201ENST00000258781 C22orf42Q6IC83 251 aa25.02■■□□□ 1.6
CCM2-201ENST00000258781 TMPRSS12Q86WS5 348 aa25.02■■□□□ 1.6
CCM2-201ENST00000258781 OR5J2Q8NH18 312 aa25.02■■□□□ 1.6
CCM2-201ENST00000258781 TSPAN32Q96QS1 320 aa25.02■■□□□ 1.6
CCM2-201ENST00000258781 TM9SF2Q99805 663 aa25.02■■□□□ 1.6
CCM2-201ENST00000258781 MED18Q9BUE0 208 aa25.02■■□□□ 1.6
CCM2-201ENST00000258781 MED11Q9P086 117 aa25.02■■□□□ 1.6
CCM2-201ENST00000258781 WIF1Q9Y5W5 379 aa25.02■■□□□ 1.6
CCM2-201ENST00000258781 A0A1W2PQL4 384 aaPredicted RBP25.02■■□□□ 1.6
CCM2-201ENST00000258781 B4DXG7 233 aa25.02■■□□□ 1.6
CCM2-201ENST00000258781 GLCEO94923 617 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms