RNA–Protein interactions for RNA: ENST00000257290.9

PDGFRA-201, Transcript of platelet derived growth factor receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFRA, Length 6,576 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-201ENST00000257290 THSD7AQ9UPZ6 1657 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 A8MXK9 166 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 LTFP02788 710 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 IFNW1P05000 195 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 CELP19835 753 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 SLC6A6P31641 620 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 THBS3P49746 956 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 NOVA1P51513 510 aaKnown RBP6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 STARD6P59095 220 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 PAX5Q02548 391 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 BCL2L1Q07817 233 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 TMEM164Q5U3C3 297 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 PLAG1Q6DJT9 500 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 C19orf35Q6ZS72 473 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 RNF165Q6ZSG1 346 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 FA2HQ7L5A8 372 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 GPX8Q8TED1 209 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 SLC35E1Q96K37 410 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 HHIPQ96QV1 700 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 FNDC3AQ9Y2H6 1198 aaKnown RBP6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 TMED3Q9Y3Q3 217 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 DAPL1A0PJW8 107 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 M0QYT0 321 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 ACOT7O00154 380 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 SLC25A12O75746 678 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 DCTP40126 519 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 CTSCP53634 463 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 DVL1P1P54792 670 aaPredicted RBP6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 RAB35Q15286 201 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 GUCA2BQ16661 112 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 KCTD11Q693B1 232 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 MAMDC4Q6UXC1 1216 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 BTNL3Q6UXE8 466 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 PDZD3Q86UT5 571 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 DUSP18Q8NEJ0 188 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 IMP4Q96G21 291 aaKnown RBP6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 PANX1Q96RD7 426 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 CDCA3Q99618 268 aaPredicted RBP6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 PTPN18Q99952 460 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 CLSTN3Q9BQT9 956 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 RHOJQ9H4E5 214 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 CWH43Q9H720 699 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 ZFP30Q9Y2G7 519 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 TCHHQ07283 1943 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 CLDN9O95484 217 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 ARR3P36575 388 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 GPR4P46093 362 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 RPL38P63173 70 aaKnown RBP6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 CTXN3Q4LDR2 81 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 THOC6Q86W42 341 aaKnown RBP6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 MRPS24Q96EL2 167 aaKnown RBP6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 FAM210BQ96KR6 192 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 GPER1Q99527 375 aa6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 POLR2J3Q9H1A7 115 aaKnown RBP6.28□□□□□ -1.4
PDGFRA-201ENST00000257290 GABRR3A8MPY1 467 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 HMSDA8MTL9 139 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 H3BQ06 376 aaPredicted RBP6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 SGK494L7N484 410 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 FBXO24O75426 580 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 B3GAT3O94766 335 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 H1F0P07305 194 aaKnown RBP6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 HOXB5P09067 269 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 KLRC2P26717 231 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 HOXC5Q00444 222 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 DEFB115Q30KQ5 88 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 EXOSC6Q5RKV6 272 aaKnown RBP6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 PHYHD1Q5SRE7 291 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 HECTD2Q5U5R9 776 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 XYLT1Q86Y38 959 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 OR51F2Q8NH61 342 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 CLCC1Q96S66 551 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 SLC12A9Q9BXP2 914 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 WDCPQ9H6R7 721 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 ASB8Q9H765 288 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 TREX1Q9NSU2 369 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 CACNG4Q9UBN1 327 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 MUTYHQ9UIF7 546 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 TBX21Q9UL17 535 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 CNTN6Q9UQ52 1028 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 I6L893 689 aaPredicted RBP6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 COX7A2P14406 83 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 TPSB2P20231 275 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 FASLGP48023 281 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 ASCL1P50553 236 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 JAG1P78504 1218 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 SLC6A3Q01959 620 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 OC90Q02509 493 aaPredicted RBP6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 MLLT11Q13015 90 aaPredicted RBP6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 SLBPQ14493 270 aaKnown RBP eCLIP6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 TPSAB1Q15661 275 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 AWAT1Q58HT5 328 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 MBOAT1Q6ZNC8 495 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 GRASPQ7Z6J2 395 aaPredicted RBP6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 PHF13Q86YI8 300 aaPredicted RBP6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 OR1S2Q8NGQ3 325 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 STAG3L4Q8TBR4 150 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 LENG9Q96B70 501 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 SLC35G5Q96KT7 338 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 TSSK3Q96PN8 268 aa6.27□□□□□ -1.41
PDGFRA-201ENST00000257290 CSF3RQ99062 836 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms