RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 ENDOUP21128 410 aaKnown RBP4.26□□□□□ -1.73
VPS13C-201ENST00000249837 DLSTP36957 453 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 VEGFBP49765 207 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 MAT1AQ00266 395 aaKnown RBP4.26□□□□□ -1.73
VPS13C-201ENST00000249837 NSDHLQ15738 373 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 SLC48A1Q6P1K1 146 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 DPY19L2P2Q6ZN68 376 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 CD163Q86VB7 1156 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 SERINC1Q9NRX5 453 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 MED17Q9NVC6 651 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 CDC14CA4D256 554 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 HYAL3O43820 417 aaPredicted RBP4.26□□□□□ -1.73
VPS13C-201ENST00000249837 CA3P07451 260 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 DCNP07585 359 aaKnown RBP4.26□□□□□ -1.73
VPS13C-201ENST00000249837 AKAIN1P0CW23 69 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 ATF1P18846 271 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 GPLD1P80108 840 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 SLC9A3R2Q15599 337 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 RNF113BQ8IZP6 322 aaKnown RBP4.26□□□□□ -1.73
VPS13C-201ENST00000249837 GOT1L1Q8NHS2 421 aaPredicted RBP4.26□□□□□ -1.73
VPS13C-201ENST00000249837 ZDHHC12Q96GR4 267 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 TOX2Q96NM4 488 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 HDAC8Q9BY41 377 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 BCL2L10Q9HD36 194 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 CYSLTR2Q9NS75 346 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 RABL2AQ9UBK7 228 aaPredicted RBP4.26□□□□□ -1.73
VPS13C-201ENST00000249837 RABL2BQ9UNT1 228 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 ANAPC1Q9H1A4 1944 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 IGHA2P01877 340 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 MAGEB1P43366 347 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 P2RX3P56373 397 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 GPR155Q7Z3F1 870 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 RELL2Q8NC24 303 aaPredicted RBP4.26□□□□□ -1.73
VPS13C-201ENST00000249837 CDC6Q99741 560 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 FGF22Q9HCT0 170 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 KCNJ13O60928 360 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 UTS2O95399 124 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 MYOGP15173 224 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 VAMP2P63027 116 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 CD276Q5ZPR3 534 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 EIF5AL1Q6IS14 154 aaKnown RBP4.26□□□□□ -1.73
VPS13C-201ENST00000249837 CD300LFQ8TDQ1 290 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 TMEM234Q8WY98 164 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 TSSK2Q96PF2 358 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 NKX3-1Q99801 234 aaPredicted RBP4.26□□□□□ -1.73
VPS13C-201ENST00000249837 ISYNA1Q9NPH2 558 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 PTTG3PQ9NZH4 202 aa4.26□□□□□ -1.73
VPS13C-201ENST00000249837 hCG_1807616A0A1W2PRN6 198 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 PRRT4C9JH25 899 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 RBMXP38159 391 aaKnown RBP4.25□□□□□ -1.73
VPS13C-201ENST00000249837 HMGA2P52926 109 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 CLRN1P58418 232 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 RUNX2Q13950 521 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 VASNQ6EMK4 673 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 FAAP20Q6NZ36 180 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 NECAB3Q96P71 396 aaPredicted RBP4.25□□□□□ -1.73
VPS13C-201ENST00000249837 SIRT3Q9NTG7 399 aaPredicted RBP4.25□□□□□ -1.73
VPS13C-201ENST00000249837 EDARQ9UNE0 448 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 PLCE1Q9P212 2302 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 ATP6V1G2-DDX39BF2Z307 99 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 ZNF593O00488 134 aaPredicted RBP4.25□□□□□ -1.73
VPS13C-201ENST00000249837 CRTAPO75718 401 aaPredicted RBP4.25□□□□□ -1.73
VPS13C-201ENST00000249837 HTR3BO95264 441 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 HOXB3P14651 431 aaPredicted RBP4.25□□□□□ -1.73
VPS13C-201ENST00000249837 PRKACAP17612 351 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 M6PRP20645 277 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 POU3F4P49335 361 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 EMDP50402 254 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 EIF5AP63241 154 aaKnown RBP4.25□□□□□ -1.73
VPS13C-201ENST00000249837 RASGEF1BQ0VAM2 473 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 CHRFAM7AQ494W8 412 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 PRAMEF8Q5VWM4 474 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 PRAMEF7Q5VXH5 474 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 ZNF793Q6ZN11 406 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 SFTPA1Q8IWL2 248 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 OR6V1Q8N148 313 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 FAM71F1Q96KD3 344 aaPredicted RBP4.25□□□□□ -1.73
VPS13C-201ENST00000249837 ZMAT3Q9HA38 289 aaKnown RBP4.25□□□□□ -1.73
VPS13C-201ENST00000249837 TESQ9UGI8 421 aaKnown RBP4.25□□□□□ -1.73
VPS13C-201ENST00000249837 SURF4O15260 269 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 SRPX2O60687 465 aaPredicted RBP4.25□□□□□ -1.73
VPS13C-201ENST00000249837 RAB40ALP0C0E4 278 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 SRMP19623 302 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 DIO1P49895 249 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 MVDP53602 400 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 FXYD4P59646 89 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 AADACL4Q5VUY2 407 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 ZNF546Q86UE3 836 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 RAB40AQ8WXH6 277 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 B3GAT2Q9NPZ5 323 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 GPATCH2Q9NW75 528 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 REV1Q9UBZ9 1251 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 A0A0A6YYH2 397 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 A6NJ64 397 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 PLA2G10O15496 165 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 HOXB5P09067 269 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 CSF1P09603 554 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 THEGLP0DJG4 465 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 DCTDP32321 178 aa4.25□□□□□ -1.73
VPS13C-201ENST00000249837 PRSS53Q2L4Q9 553 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms