RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 HS3ST6Q96QI5 342 aa11.26□□□□□ -0.61
VPREB3-201ENST00000248948 ALPK1Q96QP1 1244 aa11.26□□□□□ -0.61
VPREB3-201ENST00000248948 FOXC2Q99958 501 aa11.26□□□□□ -0.61
VPREB3-201ENST00000248948 TMEM204Q9BSN7 226 aa11.26□□□□□ -0.61
VPREB3-201ENST00000248948 SLC7A10Q9NS82 523 aa11.26□□□□□ -0.61
VPREB3-201ENST00000248948 MRPL39Q9NYK5 338 aaKnown RBP11.26□□□□□ -0.61
VPREB3-201ENST00000248948 UPB1Q9UBR1 384 aa11.26□□□□□ -0.61
VPREB3-201ENST00000248948 SLC7A7Q9UM01 511 aa11.26□□□□□ -0.61
VPREB3-201ENST00000248948 DSCAMO60469 2012 aa11.26□□□□□ -0.61
VPREB3-201ENST00000248948 CXCR6O00574 342 aa11.25□□□□□ -0.61
VPREB3-201ENST00000248948 RAD51DO75771 328 aa11.25□□□□□ -0.61
VPREB3-201ENST00000248948 OR5F1O95221 314 aa11.25□□□□□ -0.61
VPREB3-201ENST00000248948 IGF2P01344 180 aa11.25□□□□□ -0.61
VPREB3-201ENST00000248948 THY1P04216 161 aa11.25□□□□□ -0.61
VPREB3-201ENST00000248948 ITGA5P08648 1049 aa11.25□□□□□ -0.61
VPREB3-201ENST00000248948 NQO1P15559 274 aaKnown RBP11.25□□□□□ -0.61
VPREB3-201ENST00000248948 ZNF43P17038 809 aa11.25□□□□□ -0.61
VPREB3-201ENST00000248948 MPGP29372 298 aa11.25□□□□□ -0.61
VPREB3-201ENST00000248948 RBM34P42696 430 aaKnown RBP11.25□□□□□ -0.61
VPREB3-201ENST00000248948 GSK3BP49841 420 aa11.25□□□□□ -0.61
VPREB3-201ENST00000248948 IST1P53990 364 aa11.25□□□□□ -0.61
VPREB3-201ENST00000248948 TAS2R41P59536 307 aa11.25□□□□□ -0.61
VPREB3-201ENST00000248948 PSME3P61289 254 aa11.25□□□□□ -0.61
VPREB3-201ENST00000248948 SELENOWP63302 87 aa11.25□□□□□ -0.61
VPREB3-201ENST00000248948 KEAP1Q14145 624 aa11.25□□□□□ -0.61
VPREB3-201ENST00000248948 PPA1Q15181 289 aa11.25□□□□□ -0.61
VPREB3-201ENST00000248948 STK11Q15831 433 aa11.25□□□□□ -0.61
VPREB3-201ENST00000248948 TSPO2Q5TGU0 170 aa11.25□□□□□ -0.61
VPREB3-201ENST00000248948 TTC33Q6PID6 262 aaPredicted RBP11.25□□□□□ -0.61
VPREB3-201ENST00000248948 SPNS3Q6ZMD2 512 aa11.25□□□□□ -0.61
VPREB3-201ENST00000248948 WDR88Q6ZMY6 472 aa11.25□□□□□ -0.61
VPREB3-201ENST00000248948 ZNF704Q6ZNC4 412 aaPredicted RBP11.25□□□□□ -0.61
VPREB3-201ENST00000248948 TSPYL5Q86VY4 417 aaPredicted RBP11.25□□□□□ -0.61
VPREB3-201ENST00000248948 RBM45Q8IUH3 476 aaKnown RBP11.25□□□□□ -0.61
VPREB3-201ENST00000248948 ANKS4BQ8N8V4 417 aa11.25□□□□□ -0.61
VPREB3-201ENST00000248948 PLPPR2Q96GM1 343 aa11.25□□□□□ -0.61
VPREB3-201ENST00000248948 BOD1Q96IK1 185 aa11.25□□□□□ -0.61
VPREB3-201ENST00000248948 PRRC1Q96M27 445 aa11.25□□□□□ -0.61
VPREB3-201ENST00000248948 ALKBH3Q96Q83 286 aaPredicted RBP11.25□□□□□ -0.61
VPREB3-201ENST00000248948 LINC00470Q9BZP3 86 aa11.25□□□□□ -0.61
VPREB3-201ENST00000248948 CXXC4Q9H2H0 198 aa11.25□□□□□ -0.61
VPREB3-201ENST00000248948 ESRP2Q9H6T0 727 aaKnown RBP11.25□□□□□ -0.61
VPREB3-201ENST00000248948 FKRPQ9H9S5 495 aa11.25□□□□□ -0.61
VPREB3-201ENST00000248948 SEC14L4Q9UDX3 406 aa11.25□□□□□ -0.61
VPREB3-201ENST00000248948 PLEKHA6Q9Y2H5 1048 aa11.25□□□□□ -0.61
VPREB3-201ENST00000248948 CIB4A0PJX0 185 aa11.24□□□□□ -0.61
VPREB3-201ENST00000248948 ZNF587BE7ETH6 402 aa11.24□□□□□ -0.61
VPREB3-201ENST00000248948 TRAF3IP2O43734 574 aaPredicted RBP11.24□□□□□ -0.61
VPREB3-201ENST00000248948 FAM107AO95990 144 aa11.24□□□□□ -0.61
VPREB3-201ENST00000248948 HOXC12P31275 282 aa11.24□□□□□ -0.61
VPREB3-201ENST00000248948 SELENOPP49908 381 aa11.24□□□□□ -0.61
VPREB3-201ENST00000248948 ART1P52961 327 aa11.24□□□□□ -0.61
VPREB3-201ENST00000248948 SH3BGRP55822 239 aaPredicted RBP11.24□□□□□ -0.61
VPREB3-201ENST00000248948 PUDPQ08623 228 aa11.24□□□□□ -0.61
VPREB3-201ENST00000248948 C1DQ13901 141 aaKnown RBP11.24□□□□□ -0.61
VPREB3-201ENST00000248948 GABRA6Q16445 453 aa11.24□□□□□ -0.61
VPREB3-201ENST00000248948 ZNF74Q16587 644 aa11.24□□□□□ -0.61
VPREB3-201ENST00000248948 NIPAL3Q6P499 406 aa11.24□□□□□ -0.61
VPREB3-201ENST00000248948 DEF8Q6ZN54 512 aa11.24□□□□□ -0.61
VPREB3-201ENST00000248948 P3H2Q8IVL5 708 aa11.24□□□□□ -0.61
VPREB3-201ENST00000248948 UEVLDQ8IX04 471 aa11.24□□□□□ -0.61
VPREB3-201ENST00000248948 ANKK1Q8NFD2 765 aa11.24□□□□□ -0.61
VPREB3-201ENST00000248948 GEMIN6Q8WXD5 167 aaKnown RBP11.24□□□□□ -0.61
VPREB3-201ENST00000248948 MUCL1Q96DR8 90 aa11.24□□□□□ -0.61
VPREB3-201ENST00000248948 MUS81Q96NY9 551 aa11.24□□□□□ -0.61
VPREB3-201ENST00000248948 MOGAT1Q96PD6 335 aa11.24□□□□□ -0.61
VPREB3-201ENST00000248948 KCTD14Q9BQ13 255 aaPredicted RBP11.24□□□□□ -0.61
VPREB3-201ENST00000248948 PRSS27Q9BQR3 290 aa11.24□□□□□ -0.61
VPREB3-201ENST00000248948 LIME1Q9H400 295 aa11.24□□□□□ -0.61
VPREB3-201ENST00000248948 NDE1Q9NXR1 346 aa11.24□□□□□ -0.61
VPREB3-201ENST00000248948 ZNF229Q9UJW7 825 aa11.24□□□□□ -0.61
VPREB3-201ENST00000248948 AMDHD2Q9Y303 409 aa11.24□□□□□ -0.61
VPREB3-201ENST00000248948 RNF115Q9Y4L5 304 aa11.24□□□□□ -0.61
VPREB3-201ENST00000248948 NOX1Q9Y5S8 564 aa11.24□□□□□ -0.61
VPREB3-201ENST00000248948 MAGED1Q9Y5V3 778 aaPredicted RBP11.24□□□□□ -0.61
VPREB3-201ENST00000248948 F8P00451 2351 aa11.24□□□□□ -0.61
VPREB3-201ENST00000248948 GSTA4O15217 222 aa11.23□□□□□ -0.61
VPREB3-201ENST00000248948 SHOX2O60902 331 aaPredicted RBP11.23□□□□□ -0.61
VPREB3-201ENST00000248948 TMCC2O75069 709 aa11.23□□□□□ -0.61
VPREB3-201ENST00000248948 SLC43A1O75387 559 aa11.23□□□□□ -0.61
VPREB3-201ENST00000248948 ZNF432O94892 652 aa11.23□□□□□ -0.61
VPREB3-201ENST00000248948 IFNW1P05000 195 aa11.23□□□□□ -0.61
VPREB3-201ENST00000248948 TNFRSF1BP20333 461 aa11.23□□□□□ -0.61
VPREB3-201ENST00000248948 PTNP21246 168 aa11.23□□□□□ -0.61
VPREB3-201ENST00000248948 IFNA8P32881 189 aa11.23□□□□□ -0.61
VPREB3-201ENST00000248948 CLDN17P56750 224 aa11.23□□□□□ -0.61
VPREB3-201ENST00000248948 POU3F1Q03052 451 aaPredicted RBP11.23□□□□□ -0.61
VPREB3-201ENST00000248948 LTBQ06643 244 aa11.23□□□□□ -0.61
VPREB3-201ENST00000248948 DEFB113Q30KQ7 82 aa11.23□□□□□ -0.61
VPREB3-201ENST00000248948 NCMAPQ5T1S8 102 aa11.23□□□□□ -0.61
VPREB3-201ENST00000248948 GKAP1Q5VSY0 366 aaPredicted RBP11.23□□□□□ -0.61
VPREB3-201ENST00000248948 ADAM5Q6NVV9 412 aa11.23□□□□□ -0.61
VPREB3-201ENST00000248948 CBLL1Q75N03 491 aa11.23□□□□□ -0.61
VPREB3-201ENST00000248948 OFCC1Q8IZS5 231 aa11.23□□□□□ -0.61
VPREB3-201ENST00000248948 PGAM4Q8N0Y7 254 aa11.23□□□□□ -0.61
VPREB3-201ENST00000248948 C10orf53Q8N6V4 93 aa11.23□□□□□ -0.61
VPREB3-201ENST00000248948 PIK3C3Q8NEB9 887 aa11.23□□□□□ -0.61
VPREB3-201ENST00000248948 OR5J2Q8NH18 312 aa11.23□□□□□ -0.61
VPREB3-201ENST00000248948 TPD52L3Q96J77 140 aa11.23□□□□□ -0.61
VPREB3-201ENST00000248948 PIP5K1AQ99755 562 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms