RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 BIKQ13323 160 aa22.76■■□□□ 1.23
RUNDC3A-201ENST00000225441 BTBD16Q32M84 506 aa22.76■■□□□ 1.23
RUNDC3A-201ENST00000225441 UBE2NLQ5JXB2 153 aa22.76■■□□□ 1.23
RUNDC3A-201ENST00000225441 ZC3H14Q6PJT7 736 aaKnown RBP22.76■■□□□ 1.23
RUNDC3A-201ENST00000225441 SSX6Q7RTT6 188 aa22.76■■□□□ 1.23
RUNDC3A-201ENST00000225441 ZNF614Q8N883 585 aa22.76■■□□□ 1.23
RUNDC3A-201ENST00000225441 DOK4Q8TEW6 326 aa22.76■■□□□ 1.23
RUNDC3A-201ENST00000225441 RAB33BQ9H082 229 aa22.76■■□□□ 1.23
RUNDC3A-201ENST00000225441 EPHA6Q9UF33 1036 aa22.76■■□□□ 1.23
RUNDC3A-201ENST00000225441 FBXL4Q9UKA2 621 aa22.76■■□□□ 1.23
RUNDC3A-201ENST00000225441 IER3IP1Q9Y5U9 82 aa22.76■■□□□ 1.23
RUNDC3A-201ENST00000225441 IGHV1OR21-1A0A087WYE8 117 aa22.75■■□□□ 1.23
RUNDC3A-201ENST00000225441 RDH16O75452 317 aa22.75■■□□□ 1.23
RUNDC3A-201ENST00000225441 TPPPO94811 219 aa22.75■■□□□ 1.23
RUNDC3A-201ENST00000225441 IGKV1D-16P01601 117 aa22.75■■□□□ 1.23
RUNDC3A-201ENST00000225441 TCRBP04435 133 aa22.75■■□□□ 1.23
RUNDC3A-201ENST00000225441 APEHP13798 732 aaKnown RBP22.75■■□□□ 1.23
RUNDC3A-201ENST00000225441 ATF1P18846 271 aa22.75■■□□□ 1.23
RUNDC3A-201ENST00000225441 PRTGQ2VWP7 1150 aa22.75■■□□□ 1.23
RUNDC3A-201ENST00000225441 KIRREL2Q6UWL6 708 aa22.75■■□□□ 1.23
RUNDC3A-201ENST00000225441 KCTD20Q7Z5Y7 419 aa22.75■■□□□ 1.23
RUNDC3A-201ENST00000225441 OR4K13Q8NH42 304 aa22.75■■□□□ 1.23
RUNDC3A-201ENST00000225441 ZMYND19Q96E35 227 aaPredicted RBP22.75■■□□□ 1.23
RUNDC3A-201ENST00000225441 NCDNQ9UBB6 729 aa22.75■■□□□ 1.23
RUNDC3A-201ENST00000225441 SLC6A5Q9Y345 797 aa22.75■■□□□ 1.23
RUNDC3A-201ENST00000225441 A0A1W2PRG6 482 aa22.75■■□□□ 1.23
RUNDC3A-201ENST00000225441 SIGLEC6O43699 453 aa22.75■■□□□ 1.23
RUNDC3A-201ENST00000225441 OR7A10O76100 309 aa22.75■■□□□ 1.23
RUNDC3A-201ENST00000225441 NR0B2Q15466 257 aa22.75■■□□□ 1.23
RUNDC3A-201ENST00000225441 CPEB4Q17RY0 729 aaKnown RBP eCLIP22.75■■□□□ 1.23
RUNDC3A-201ENST00000225441 TP53I3Q53FA7 332 aa22.75■■□□□ 1.23
RUNDC3A-201ENST00000225441 NKAIN2Q5VXU1 208 aa22.75■■□□□ 1.23
RUNDC3A-201ENST00000225441 SLC6A19Q695T7 634 aa22.75■■□□□ 1.23
RUNDC3A-201ENST00000225441 LAMTOR1Q6IAA8 161 aa22.75■■□□□ 1.23
RUNDC3A-201ENST00000225441 RPTNQ6XPR3 784 aa22.75■■□□□ 1.23
RUNDC3A-201ENST00000225441 DGAT2L6Q6ZPD8 337 aa22.75■■□□□ 1.23
RUNDC3A-201ENST00000225441 C19orf47Q8N9M1 422 aaKnown RBP22.75■■□□□ 1.23
RUNDC3A-201ENST00000225441 LIPHQ8WWY8 451 aa22.75■■□□□ 1.23
RUNDC3A-201ENST00000225441 MAP3K3Q99759 626 aa22.75■■□□□ 1.23
RUNDC3A-201ENST00000225441 PELOQ9BRX2 385 aaKnown RBP22.75■■□□□ 1.23
RUNDC3A-201ENST00000225441 PLEKHA1Q9HB21 404 aa22.75■■□□□ 1.23
RUNDC3A-201ENST00000225441 TRBV2A0A0J9YWF9 115 aa22.74■■□□□ 1.23
RUNDC3A-201ENST00000225441 A0A1B0GVI7 797 aa22.74■■□□□ 1.23
RUNDC3A-201ENST00000225441 SERINC4A6NH21 518 aa22.74■■□□□ 1.23
RUNDC3A-201ENST00000225441 EVI2BP34910 448 aa22.74■■□□□ 1.23
RUNDC3A-201ENST00000225441 SLC25A1P53007 311 aa22.74■■□□□ 1.23
RUNDC3A-201ENST00000225441 GFERP55789 205 aa22.74■■□□□ 1.23
RUNDC3A-201ENST00000225441 RPS11P62280 158 aaKnown RBP eCLIP22.74■■□□□ 1.23
RUNDC3A-201ENST00000225441 CLPPQ16740 277 aaPredicted RBP22.74■■□□□ 1.23
RUNDC3A-201ENST00000225441 BTN2A1Q7KYR7 527 aa22.74■■□□□ 1.23
RUNDC3A-201ENST00000225441 KRT74Q7RTS7 529 aa22.74■■□□□ 1.23
RUNDC3A-201ENST00000225441 CADM2Q8N3J6 435 aa22.74■■□□□ 1.23
RUNDC3A-201ENST00000225441 NPEPL1Q8NDH3 523 aa22.74■■□□□ 1.23
RUNDC3A-201ENST00000225441 SDR9C7Q8NEX9 313 aa22.74■■□□□ 1.23
RUNDC3A-201ENST00000225441 OR7G1Q8NGA0 311 aa22.74■■□□□ 1.23
RUNDC3A-201ENST00000225441 OR6C4Q8NGE1 309 aa22.74■■□□□ 1.23
RUNDC3A-201ENST00000225441 CLDN4O14493 209 aa22.73■■□□□ 1.23
RUNDC3A-201ENST00000225441 IMPA2O14732 288 aa22.73■■□□□ 1.23
RUNDC3A-201ENST00000225441 KHNYNO15037 678 aaKnown RBP22.73■■□□□ 1.23
RUNDC3A-201ENST00000225441 SULT1B1O43704 296 aa22.73■■□□□ 1.23
RUNDC3A-201ENST00000225441 ADAM11O75078 769 aa22.73■■□□□ 1.23
RUNDC3A-201ENST00000225441 GYPBP06028 91 aa22.73■■□□□ 1.23
RUNDC3A-201ENST00000225441 ADH7P40394 386 aa22.73■■□□□ 1.23
RUNDC3A-201ENST00000225441 RPS4XP62701 263 aaKnown RBP22.73■■□□□ 1.23
RUNDC3A-201ENST00000225441 STX4Q12846 297 aa22.73■■□□□ 1.23
RUNDC3A-201ENST00000225441 FAM69AQ5T7M9 428 aa22.73■■□□□ 1.23
RUNDC3A-201ENST00000225441 BCL2L15Q5TBC7 163 aa22.73■■□□□ 1.23
RUNDC3A-201ENST00000225441 OR5H6Q8NGV6 325 aa22.73■■□□□ 1.23
RUNDC3A-201ENST00000225441 SMIM4Q8WVI0 70 aa22.73■■□□□ 1.23
RUNDC3A-201ENST00000225441 CCDC74AQ96AQ1 378 aa22.73■■□□□ 1.23
RUNDC3A-201ENST00000225441 ZDHHC12Q96GR4 267 aa22.73■■□□□ 1.23
RUNDC3A-201ENST00000225441 TGM7Q96PF1 710 aa22.73■■□□□ 1.23
RUNDC3A-201ENST00000225441 CACNG6Q9BXT2 260 aa22.73■■□□□ 1.23
RUNDC3A-201ENST00000225441 OR51J1Q9H342 316 aa22.73■■□□□ 1.23
RUNDC3A-201ENST00000225441 BRD7Q9NPI1 651 aa22.73■■□□□ 1.23
RUNDC3A-201ENST00000225441 ARPC4-TTLL3A0A0A6YYG9 625 aa22.73■■□□□ 1.23
RUNDC3A-201ENST00000225441 LY6G6EA0A0G2JKS1 128 aa22.73■■□□□ 1.23
RUNDC3A-201ENST00000225441 NAP1L6A6NFF2 107 aa22.73■■□□□ 1.23
RUNDC3A-201ENST00000225441 DUX1O43812 170 aa22.73■■□□□ 1.23
RUNDC3A-201ENST00000225441 PNMTP11086 282 aa22.73■■□□□ 1.23
RUNDC3A-201ENST00000225441 ANXA3P12429 323 aa22.73■■□□□ 1.23
RUNDC3A-201ENST00000225441 EDNRAP25101 427 aa22.73■■□□□ 1.23
RUNDC3A-201ENST00000225441 GPLD1P80108 840 aa22.73■■□□□ 1.23
RUNDC3A-201ENST00000225441 FCN2Q15485 313 aa22.73■■□□□ 1.23
RUNDC3A-201ENST00000225441 TCEAL6Q6IPX3 200 aa22.73■■□□□ 1.23
RUNDC3A-201ENST00000225441 LYPD4Q6UWN0 246 aa22.73■■□□□ 1.23
RUNDC3A-201ENST00000225441 NUP54Q7Z3B4 507 aa22.73■■□□□ 1.23
RUNDC3A-201ENST00000225441 FGD2Q7Z6J4 655 aa22.73■■□□□ 1.23
RUNDC3A-201ENST00000225441 RCBTB1Q8NDN9 531 aa22.73■■□□□ 1.23
RUNDC3A-201ENST00000225441 OR9A4Q8NGU2 314 aa22.73■■□□□ 1.23
RUNDC3A-201ENST00000225441 C15orf40Q8WUR7 153 aa22.73■■□□□ 1.23
RUNDC3A-201ENST00000225441 TCEAL3Q969E4 200 aa22.73■■□□□ 1.23
RUNDC3A-201ENST00000225441 NUDT15Q9NV35 164 aa22.73■■□□□ 1.23
RUNDC3A-201ENST00000225441 MOKQ9UQ07 419 aa22.73■■□□□ 1.23
RUNDC3A-201ENST00000225441 PCDHGA9Q9Y5G4 932 aaKnown RBP22.73■■□□□ 1.23
RUNDC3A-201ENST00000225441 U3KQA8 63 aa22.73■■□□□ 1.23
RUNDC3A-201ENST00000225441 CABIN1Q9Y6J0 2220 aa22.72■■□□□ 1.23
RUNDC3A-201ENST00000225441 LAMA1P25391 3075 aa22.72■■□□□ 1.23
RUNDC3A-201ENST00000225441 TEX13CA0A0J9YWL9 993 aa22.72■■□□□ 1.23
RUNDC3A-201ENST00000225441 TLCD2A6NGC4 264 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms