RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 PTTG1O95997 202 aa17.52■□□□□ 0.4
SMPD3-201ENST00000219334 IL2RAP01589 272 aa17.52■□□□□ 0.4
SMPD3-201ENST00000219334 RAB40ALP0C0E4 278 aa17.52■□□□□ 0.4
SMPD3-201ENST00000219334 OR2T7P0C7T2 308 aa17.52■□□□□ 0.4
SMPD3-201ENST00000219334 KCNAB1Q14722 419 aa17.52■□□□□ 0.4
SMPD3-201ENST00000219334 USF2Q15853 346 aaPredicted RBP17.52■□□□□ 0.4
SMPD3-201ENST00000219334 PRAMEF9Q5VWM5 478 aa17.52■□□□□ 0.4
SMPD3-201ENST00000219334 LINC01465Q8N7H1 131 aa17.52■□□□□ 0.4
SMPD3-201ENST00000219334 OR4D6Q8NGJ1 314 aa17.52■□□□□ 0.4
SMPD3-201ENST00000219334 OR2T27Q8NH04 317 aa17.52■□□□□ 0.4
SMPD3-201ENST00000219334 RAB40AQ8WXH6 277 aa17.52■□□□□ 0.4
SMPD3-201ENST00000219334 FAM117AQ9C073 453 aa17.52■□□□□ 0.4
SMPD3-201ENST00000219334 NT5DC2Q9H857 520 aa17.52■□□□□ 0.4
SMPD3-201ENST00000219334 NPFFR2Q9Y5X5 522 aa17.52■□□□□ 0.4
SMPD3-201ENST00000219334 ATP6V1G1O75348 118 aa17.52■□□□□ 0.4
SMPD3-201ENST00000219334 CRHBPP24387 322 aa17.52■□□□□ 0.4
SMPD3-201ENST00000219334 RPS23P62266 143 aaKnown RBP17.52■□□□□ 0.4
SMPD3-201ENST00000219334 ZNF91Q05481 1191 aa17.52■□□□□ 0.4
SMPD3-201ENST00000219334 MLLT11Q13015 90 aaPredicted RBP17.52■□□□□ 0.4
SMPD3-201ENST00000219334 SELPLGQ14242 412 aa17.52■□□□□ 0.4
SMPD3-201ENST00000219334 MRGPRX1Q96LB2 322 aa17.52■□□□□ 0.4
SMPD3-201ENST00000219334 TMEM59Q9BXS4 323 aa17.52■□□□□ 0.4
SMPD3-201ENST00000219334 PAQR5Q9NXK6 330 aaPredicted RBP17.52■□□□□ 0.4
SMPD3-201ENST00000219334 SLAMF8Q9P0V8 285 aa17.52■□□□□ 0.4
SMPD3-201ENST00000219334 TCRBV3S1A0A5B6 114 aa17.52■□□□□ 0.39
SMPD3-201ENST00000219334 ANKRD33BA6NCL7 494 aa17.52■□□□□ 0.39
SMPD3-201ENST00000219334 A8MXE2 369 aa17.52■□□□□ 0.39
SMPD3-201ENST00000219334 IDSB3KWA1 339 aa17.52■□□□□ 0.39
SMPD3-201ENST00000219334 K7ESM1 405 aa17.52■□□□□ 0.39
SMPD3-201ENST00000219334 TFP02787 698 aa17.52■□□□□ 0.39
SMPD3-201ENST00000219334 EIF4EP06730 217 aaKnown RBP17.52■□□□□ 0.39
SMPD3-201ENST00000219334 PFN3P60673 137 aa17.52■□□□□ 0.39
SMPD3-201ENST00000219334 DPTQ07507 201 aa17.52■□□□□ 0.39
SMPD3-201ENST00000219334 LEXMQ3ZCV2 418 aa17.52■□□□□ 0.39
SMPD3-201ENST00000219334 AADACL3Q5VUY0 350 aa17.52■□□□□ 0.39
SMPD3-201ENST00000219334 UBL7Q96S82 380 aaPredicted RBP17.52■□□□□ 0.39
SMPD3-201ENST00000219334 SLC25A31Q9H0C2 315 aa17.52■□□□□ 0.39
SMPD3-201ENST00000219334 ACKR4Q9NPB9 350 aa17.52■□□□□ 0.39
SMPD3-201ENST00000219334 UBR2Q8IWV8 1755 aa17.52■□□□□ 0.39
SMPD3-201ENST00000219334 MDFIC2A0A1B0GVS7 189 aa17.51■□□□□ 0.39
SMPD3-201ENST00000219334 BCAS1O75363 584 aaPredicted RBP17.51■□□□□ 0.39
SMPD3-201ENST00000219334 CLVS2Q5SYC1 327 aa17.51■□□□□ 0.39
SMPD3-201ENST00000219334 RSPO2Q6UXX9 243 aaPredicted RBP17.51■□□□□ 0.39
SMPD3-201ENST00000219334 GRINAQ7Z429 371 aa17.51■□□□□ 0.39
SMPD3-201ENST00000219334 OR1N1Q8NGS0 311 aa17.51■□□□□ 0.39
SMPD3-201ENST00000219334 NKX3-1Q99801 234 aaPredicted RBP17.51■□□□□ 0.39
SMPD3-201ENST00000219334 C7orf50Q9BRJ6 194 aaKnown RBP17.51■□□□□ 0.39
SMPD3-201ENST00000219334 A0A1W2PQ09 198 aa17.51■□□□□ 0.39
SMPD3-201ENST00000219334 TMEM221A6NGB7 291 aa17.51■□□□□ 0.39
SMPD3-201ENST00000219334 P2RX6O15547 441 aa17.51■□□□□ 0.39
SMPD3-201ENST00000219334 TNFSF15O95150 251 aa17.51■□□□□ 0.39
SMPD3-201ENST00000219334 CXCL10P02778 98 aa17.51■□□□□ 0.39
SMPD3-201ENST00000219334 CCSMST1Q4G0I0 132 aa17.51■□□□□ 0.39
SMPD3-201ENST00000219334 C1orf140Q5VVS0 124 aa17.51■□□□□ 0.39
SMPD3-201ENST00000219334 DPY19L2P2Q6ZN68 376 aa17.51■□□□□ 0.39
SMPD3-201ENST00000219334 ZFP90Q8TF47 636 aa17.51■□□□□ 0.39
SMPD3-201ENST00000219334 MUL1Q969V5 352 aa17.51■□□□□ 0.39
SMPD3-201ENST00000219334 MIB2Q96AX9 1013 aa17.51■□□□□ 0.39
SMPD3-201ENST00000219334 NMNAT3Q96T66 252 aa17.51■□□□□ 0.39
SMPD3-201ENST00000219334 PPIL3Q9H2H8 161 aaKnown RBP17.51■□□□□ 0.39
SMPD3-201ENST00000219334 DUSP7Q16829 419 aa17.51■□□□□ 0.39
SMPD3-201ENST00000219334 LIN7BQ9HAP6 207 aa17.51■□□□□ 0.39
SMPD3-201ENST00000219334 OR6C6A6NF89 314 aa17.51■□□□□ 0.39
SMPD3-201ENST00000219334 UBFD1O14562 309 aaKnown RBP17.51■□□□□ 0.39
SMPD3-201ENST00000219334 SLC1A3P43003 542 aa17.51■□□□□ 0.39
SMPD3-201ENST00000219334 TMEM71Q6P5X7 295 aa17.51■□□□□ 0.39
SMPD3-201ENST00000219334 RDH10Q8IZV5 341 aa17.51■□□□□ 0.39
SMPD3-201ENST00000219334 SARAFQ96BY9 339 aa17.51■□□□□ 0.39
SMPD3-201ENST00000219334 KIF25Q9UIL4 384 aa17.51■□□□□ 0.39
SMPD3-201ENST00000219334 A0A1W2PPC4 97 aa17.51■□□□□ 0.39
SMPD3-201ENST00000219334 KRBA1A5PL33 1030 aa17.51■□□□□ 0.39
SMPD3-201ENST00000219334 GASTP01350 101 aa17.51■□□□□ 0.39
SMPD3-201ENST00000219334 KITLGP21583 273 aa17.51■□□□□ 0.39
SMPD3-201ENST00000219334 NOVA1P51513 510 aaKnown RBP17.51■□□□□ 0.39
SMPD3-201ENST00000219334 EDDM3BP56851 147 aa17.51■□□□□ 0.39
SMPD3-201ENST00000219334 C9orf50Q5SZB4 431 aa17.51■□□□□ 0.39
SMPD3-201ENST00000219334 ZBTB8AQ96BR9 441 aa17.51■□□□□ 0.39
SMPD3-201ENST00000219334 HRASLSQ9HDD0 168 aa17.51■□□□□ 0.39
SMPD3-201ENST00000219334 A4GALTQ9NPC4 353 aa17.51■□□□□ 0.39
SMPD3-201ENST00000219334 HIF1ANQ9NWT6 349 aa17.51■□□□□ 0.39
SMPD3-201ENST00000219334 ARPC5O15511 151 aa17.5■□□□□ 0.39
SMPD3-201ENST00000219334 KCNK2O95069 426 aa17.5■□□□□ 0.39
SMPD3-201ENST00000219334 MT-ATP6P00846 226 aa17.5■□□□□ 0.39
SMPD3-201ENST00000219334 APOC3P02656 99 aa17.5■□□□□ 0.39
SMPD3-201ENST00000219334 KIR2DL3P43628 341 aa17.5■□□□□ 0.39
SMPD3-201ENST00000219334 H1FNTQ75WM6 255 aaPredicted RBP17.5■□□□□ 0.39
SMPD3-201ENST00000219334 CPEB3Q8NE35 698 aaKnown RBP17.5■□□□□ 0.39
SMPD3-201ENST00000219334 GIMAP5Q96F15 307 aa17.5■□□□□ 0.39
SMPD3-201ENST00000219334 STACQ99469 402 aa17.5■□□□□ 0.39
SMPD3-201ENST00000219334 CD14P08571 375 aa17.5■□□□□ 0.39
SMPD3-201ENST00000219334 CLDN6P56747 220 aa17.5■□□□□ 0.39
SMPD3-201ENST00000219334 ZNF750Q32MQ0 723 aa17.5■□□□□ 0.39
SMPD3-201ENST00000219334 ABHD11Q8NFV4 315 aa17.5■□□□□ 0.39
SMPD3-201ENST00000219334 C11orf40Q8WZ69 217 aa17.5■□□□□ 0.39
SMPD3-201ENST00000219334 DEFB127Q9H1M4 99 aa17.5■□□□□ 0.39
SMPD3-201ENST00000219334 MED20Q9H944 212 aa17.5■□□□□ 0.39
SMPD3-201ENST00000219334 C2CD4DB7Z1M9 353 aa17.5■□□□□ 0.39
SMPD3-201ENST00000219334 PAHP00439 452 aa17.5■□□□□ 0.39
SMPD3-201ENST00000219334 NR4A2P43354 598 aa17.5■□□□□ 0.39
SMPD3-201ENST00000219334 GJC3Q8NFK1 279 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms