RNA–Protein interactions for RNA: ENST00000218652.11

NDFIP2-201, Transcript of Nedd4 family interacting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP2, Length 4,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP2-201ENST00000218652 SLC36A2Q495M3 483 aa13.9□□□□□ -0.18
NDFIP2-201ENST00000218652 TMEM31Q5JXX7 168 aa13.9□□□□□ -0.18
NDFIP2-201ENST00000218652 PAPD4Q6PIY7 484 aaKnown RBP13.9□□□□□ -0.18
NDFIP2-201ENST00000218652 ADGRF3Q8IZF5 1079 aa13.9□□□□□ -0.18
NDFIP2-201ENST00000218652 LRRC46Q96FV0 321 aa13.9□□□□□ -0.18
NDFIP2-201ENST00000218652 SLC39A13Q96H72 371 aa13.9□□□□□ -0.18
NDFIP2-201ENST00000218652 HHIPQ96QV1 700 aa13.9□□□□□ -0.18
NDFIP2-201ENST00000218652 LIN7BQ9HAP6 207 aa13.9□□□□□ -0.18
NDFIP2-201ENST00000218652 PATZ1Q9HBE1 687 aaKnown RBP13.9□□□□□ -0.18
NDFIP2-201ENST00000218652 NRIP3Q9NQ35 241 aa13.9□□□□□ -0.18
NDFIP2-201ENST00000218652 PURGQ9UJV8 347 aaKnown RBP13.9□□□□□ -0.18
NDFIP2-201ENST00000218652 ADAMTS5Q9UNA0 930 aa13.9□□□□□ -0.18
NDFIP2-201ENST00000218652 PRSS38A1L453 326 aa13.89□□□□□ -0.19
NDFIP2-201ENST00000218652 FOXE1O00358 373 aaPredicted RBP13.89□□□□□ -0.19
NDFIP2-201ENST00000218652 FURINP09958 794 aa13.89□□□□□ -0.19
NDFIP2-201ENST00000218652 IL32P24001 234 aa13.89□□□□□ -0.19
NDFIP2-201ENST00000218652 GDF1P27539 372 aa13.89□□□□□ -0.19
NDFIP2-201ENST00000218652 Q499Y3 187 aa13.89□□□□□ -0.19
NDFIP2-201ENST00000218652 SHEQ5VZ18 495 aa13.89□□□□□ -0.19
NDFIP2-201ENST00000218652 PLPP5Q8NEB5 264 aa13.89□□□□□ -0.19
NDFIP2-201ENST00000218652 MAP3K3Q99759 626 aa13.89□□□□□ -0.19
NDFIP2-201ENST00000218652 ZNF286AQ9HBT8 521 aa13.89□□□□□ -0.19
NDFIP2-201ENST00000218652 SPEF2Q9C093 1822 aa13.89□□□□□ -0.19
NDFIP2-201ENST00000218652 LOC102725191A0A1B0GVB3 256 aa13.89□□□□□ -0.19
NDFIP2-201ENST00000218652 M0QYG6 137 aa13.89□□□□□ -0.19
NDFIP2-201ENST00000218652 DPP4P27487 766 aa13.89□□□□□ -0.19
NDFIP2-201ENST00000218652 EPHA4P54764 986 aa13.89□□□□□ -0.19
NDFIP2-201ENST00000218652 SSTP61278 116 aa13.89□□□□□ -0.19
NDFIP2-201ENST00000218652 DEFA6Q01524 100 aa13.89□□□□□ -0.19
NDFIP2-201ENST00000218652 TAZQ16635 292 aa13.89□□□□□ -0.19
NDFIP2-201ENST00000218652 STEAP1BQ6NZ63 245 aa13.89□□□□□ -0.19
NDFIP2-201ENST00000218652 RNF113BQ8IZP6 322 aaKnown RBP13.89□□□□□ -0.19
NDFIP2-201ENST00000218652 ZNF439Q8NDP4 499 aa13.89□□□□□ -0.19
NDFIP2-201ENST00000218652 ASB17Q8WXJ9 295 aa13.89□□□□□ -0.19
NDFIP2-201ENST00000218652 SLC22A12Q96S37 553 aa13.89□□□□□ -0.19
NDFIP2-201ENST00000218652 C1orf198Q9H425 327 aa13.89□□□□□ -0.19
NDFIP2-201ENST00000218652 FKRPQ9H9S5 495 aa13.89□□□□□ -0.19
NDFIP2-201ENST00000218652 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.89□□□□□ -0.19
NDFIP2-201ENST00000218652 A0A1B0GWA3 101 aa13.89□□□□□ -0.19
NDFIP2-201ENST00000218652 SLC16A6O15403 523 aa13.89□□□□□ -0.19
NDFIP2-201ENST00000218652 MMP2P08253 660 aa13.89□□□□□ -0.19
NDFIP2-201ENST00000218652 FCGR2AP12318 317 aa13.89□□□□□ -0.19
NDFIP2-201ENST00000218652 SNCAP37840 140 aa13.89□□□□□ -0.19
NDFIP2-201ENST00000218652 PDE7AQ13946 482 aa13.89□□□□□ -0.19
NDFIP2-201ENST00000218652 TMEM41BQ5BJD5 291 aa13.89□□□□□ -0.19
NDFIP2-201ENST00000218652 SYT6Q5T7P8 510 aaPredicted RBP13.89□□□□□ -0.19
NDFIP2-201ENST00000218652 HENMT1Q5T8I9 393 aaKnown RBP13.89□□□□□ -0.19
NDFIP2-201ENST00000218652 PRAMEF20Q5VT98 475 aa13.89□□□□□ -0.19
NDFIP2-201ENST00000218652 LYSMD2Q8IV50 215 aa13.89□□□□□ -0.19
NDFIP2-201ENST00000218652 SIAEQ9HAT2 523 aa13.89□□□□□ -0.19
NDFIP2-201ENST00000218652 OBP2BQ9NPH6 170 aa13.89□□□□□ -0.19
NDFIP2-201ENST00000218652 PRAMEF27A3QJZ7 478 aa13.89□□□□□ -0.19
NDFIP2-201ENST00000218652 TRABD2BA6NFA1 517 aa13.89□□□□□ -0.19
NDFIP2-201ENST00000218652 ZFAND5O76080 213 aa13.89□□□□□ -0.19
NDFIP2-201ENST00000218652 CR2P20023 1033 aa13.89□□□□□ -0.19
NDFIP2-201ENST00000218652 SF3B4Q15427 424 aaKnown RBP eCLIP13.89□□□□□ -0.19
NDFIP2-201ENST00000218652 RPE65Q16518 533 aa13.89□□□□□ -0.19
NDFIP2-201ENST00000218652 PRAMEF9Q5VWM5 478 aa13.89□□□□□ -0.19
NDFIP2-201ENST00000218652 Q6ZTK2 550 aa13.89□□□□□ -0.19
NDFIP2-201ENST00000218652 SLC30A7Q8NEW0 376 aa13.89□□□□□ -0.19
NDFIP2-201ENST00000218652 FYTTD1Q96QD9 318 aaKnown RBP13.89□□□□□ -0.19
NDFIP2-201ENST00000218652 PKMYT1Q99640 499 aa13.89□□□□□ -0.19
NDFIP2-201ENST00000218652 SEC22CQ9BRL7 303 aa13.89□□□□□ -0.19
NDFIP2-201ENST00000218652 LRIT1Q9P2V4 623 aa13.89□□□□□ -0.19
NDFIP2-201ENST00000218652 NUP214P35658 2090 aaPredicted RBP13.89□□□□□ -0.19
NDFIP2-201ENST00000218652 SLC43A1O75387 559 aa13.88□□□□□ -0.19
NDFIP2-201ENST00000218652 POU3F2P20265 443 aaPredicted RBP13.88□□□□□ -0.19
NDFIP2-201ENST00000218652 RPS19P39019 145 aaKnown RBP13.88□□□□□ -0.19
NDFIP2-201ENST00000218652 HTR5AP47898 357 aa13.88□□□□□ -0.19
NDFIP2-201ENST00000218652 FOXK2Q01167 660 aa13.88□□□□□ -0.19
NDFIP2-201ENST00000218652 CDKN3Q16667 212 aa13.88□□□□□ -0.19
NDFIP2-201ENST00000218652 MEP1BQ16820 701 aa13.88□□□□□ -0.19
NDFIP2-201ENST00000218652 UBE2NLQ5JXB2 153 aa13.88□□□□□ -0.19
NDFIP2-201ENST00000218652 LINC00346Q8IVM7 164 aa13.88□□□□□ -0.19
NDFIP2-201ENST00000218652 SLC16A11Q8NCK7 471 aa13.88□□□□□ -0.19
NDFIP2-201ENST00000218652 SLC41A2Q96JW4 573 aa13.88□□□□□ -0.19
NDFIP2-201ENST00000218652 MED17Q9NVC6 651 aa13.88□□□□□ -0.19
NDFIP2-201ENST00000218652 TRBV11-1A0A0K0K1C0 115 aa13.88□□□□□ -0.19
NDFIP2-201ENST00000218652 B3GALT4O96024 378 aa13.88□□□□□ -0.19
NDFIP2-201ENST00000218652 RPA2P15927 270 aa13.88□□□□□ -0.19
NDFIP2-201ENST00000218652 FOLR3P41439 243 aa13.88□□□□□ -0.19
NDFIP2-201ENST00000218652 NXNL2Q5VZ03 156 aa13.88□□□□□ -0.19
NDFIP2-201ENST00000218652 SLC16A14Q7RTX9 510 aa13.88□□□□□ -0.19
NDFIP2-201ENST00000218652 VRK3Q8IV63 474 aa13.88□□□□□ -0.19
NDFIP2-201ENST00000218652 OR56B1Q8NGI3 324 aa13.88□□□□□ -0.19
NDFIP2-201ENST00000218652 HSD17B8Q92506 261 aa13.88□□□□□ -0.19
NDFIP2-201ENST00000218652 MRPL38Q96DV4 380 aaKnown RBP13.88□□□□□ -0.19
NDFIP2-201ENST00000218652 BSCL2Q96G97 398 aaPredicted RBP13.88□□□□□ -0.19
NDFIP2-201ENST00000218652 PDCD1LG2Q9BQ51 273 aa13.88□□□□□ -0.19
NDFIP2-201ENST00000218652 GLIPR2Q9H4G4 154 aa13.88□□□□□ -0.19
NDFIP2-201ENST00000218652 NENFQ9UMX5 172 aa13.88□□□□□ -0.19
NDFIP2-201ENST00000218652 CABIN1Q9Y6J0 2220 aa13.88□□□□□ -0.19
NDFIP2-201ENST00000218652 AP1G1O43747 822 aa13.88□□□□□ -0.19
NDFIP2-201ENST00000218652 KLKB1P03952 638 aa13.88□□□□□ -0.19
NDFIP2-201ENST00000218652 GPX2P18283 190 aa13.88□□□□□ -0.19
NDFIP2-201ENST00000218652 ELAVL4P26378 380 aaKnown RBP13.88□□□□□ -0.19
NDFIP2-201ENST00000218652 HTR3AP46098 478 aa13.88□□□□□ -0.19
NDFIP2-201ENST00000218652 TAS2R46P59540 309 aa13.88□□□□□ -0.19
NDFIP2-201ENST00000218652 MSMO1Q15800 293 aa13.88□□□□□ -0.19
NDFIP2-201ENST00000218652 IAH1Q2TAA2 248 aaPredicted RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms