RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Grb7Q03160 535 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Znf800Q0VEE6 662 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Nkx6-3Q3UHX8 262 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 SelenohQ3UQA7 116 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Slc38a8Q5HZH7 432 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Gm11232Q5SPI8 295 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Fam46cQ5SSF7 391 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Rasl10bQ5SSG5 203 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Sema3bQ62177 748 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Lrrc8eQ66JT1 795 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 GnptgQ6S5C2 307 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Olfr657Q7TRP7 319 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Fads6Q80UG1 342 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Ankfy1Q810B6 1169 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Slc2a12Q8BFW9 622 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Slc5a7Q8BGY9 580 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Slc17a6Q8BLE7 582 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Mettl22Q8R1C6 393 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Slc38a4Q8R1S9 547 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Slc17a9Q8VCL5 447 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Itgbl1Q8VDV0 494 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Olfr772Q8VGC5 311 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Olfr1351Q8VGU6 319 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Rrp1bQ91YK2 724 aaKnown RBP8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Prpf19Q99KP6 504 aaKnown RBP8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Q9CQM1 111 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 D10Wsu102eQ9CX66 185 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Dph7Q9CYU6 477 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Lysmd1Q9D0E3 226 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 PpbpQ9EQI5 113 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Bmp15Q9Z0L4 392 aa8.29□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Trav13-4-dv7A0A075B6C2 110 aa8.28□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Trav13d-4A0A0G2JFX3 110 aa8.28□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Ldlrad3A2AR95 345 aa8.28□□□□□ -1.08
Upf3b-201ENSMUST00000076265 4931406B18RikA2RSL7 367 aa8.28□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Vmn2r50E9PW61 861 aa8.28□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Vmn2r31L7N1Z4 861 aa8.28□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Pias3O54714 628 aa8.28□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Mmp23O88676 391 aa8.28□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Gnpda1O88958 289 aa8.28□□□□□ -1.08
Upf3b-201ENSMUST00000076265 LcatP16301 438 aa8.28□□□□□ -1.08
Upf3b-201ENSMUST00000076265 RogdiQ3TDK6 287 aa8.28□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Tmem63bQ3TWI9 832 aa8.28□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Sf1Q64213 653 aaKnown RBP8.28□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Txndc8Q69AB2 127 aa8.28□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Adat2Q6P6J0 191 aa8.28□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Atp6v0d2Q80SY3 350 aa8.28□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Trmt61aQ80XC2 290 aa8.28□□□□□ -1.08
Upf3b-201ENSMUST00000076265 TecrlQ8BFZ1 361 aa8.28□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Q8C3M9 231 aa8.28□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Peli1Q8C669 418 aa8.28□□□□□ -1.08
Upf3b-201ENSMUST00000076265 TapbplQ8VD31 451 aa8.28□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Memo1Q91VH6 297 aa8.28□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Atpaf2Q91YY4 289 aa8.28□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Rnps1Q99M28 305 aaKnown RBP8.28□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Chrm3Q9ERZ3 589 aa8.28□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Kat2aQ9JHD2 830 aa8.28□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Slc23a1Q9Z2J0 605 aa8.28□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Pds5aQ6A026 1332 aa8.28□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Lamb1P02469 1786 aa8.28□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Vmn2r33K7N705 861 aa8.28□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Capn6O35646 641 aa8.28□□□□□ -1.08
Upf3b-201ENSMUST00000076265 MscO88940 201 aa8.28□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Htr5bP31387 370 aa8.28□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Pim3P58750 326 aa8.28□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Prss36Q5K2P8 849 aa8.28□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Nhlh2Q64221 135 aa8.28□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Paqr6Q6TCG5 343 aa8.28□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Olfr1015Q7TR94 312 aa8.28□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Pomt2Q8BGQ4 820 aa8.28□□□□□ -1.08
Upf3b-201ENSMUST00000076265 4932411N23RikQ8C0S0 470 aa8.28□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Tp53inp2Q8CFU8 221 aa8.28□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Rnf208Q8K0W3 265 aa8.28□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Olfr195Q8VGQ6 308 aa8.28□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Rnf111Q99ML9 989 aa8.28□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Rwdd4Q9CPR1 188 aa8.28□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Josd2Q9CR30 188 aa8.28□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Ca7Q9ERQ8 264 aa8.28□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Zgrf1Q0VGT4 1863 aa8.27□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Ajm1A2AJA9 974 aa8.27□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Hbb-bh2B2RVB7 147 aa8.27□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Gm9972E9Q053 102 aa8.27□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Cox5aP12787 146 aa8.27□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Asgr2P24721 301 aa8.27□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Slc6a1P31648 599 aa8.27□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Rfx3P48381 749 aa8.27□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Inpp5jP59644 1003 aa8.27□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Hspd1P63038 573 aaKnown RBP8.27□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Gdf3Q07104 366 aa8.27□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Hoxc4Q08624 264 aa8.27□□□□□ -1.09
Upf3b-201ENSMUST00000076265 PomkQ3TUA9 349 aa8.27□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Nfatc2Q60591 927 aa8.27□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Slc39a14Q75N73 489 aa8.27□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Olfr1219Q7TR04 311 aa8.27□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Poc1bQ8BHD1 476 aa8.27□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Fzd10Q8BKG4 582 aa8.27□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Shisa7Q8C3Q5 558 aa8.27□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Upp2Q8CGR7 320 aa8.27□□□□□ -1.09
Upf3b-201ENSMUST00000076265 RetnlgQ8K426 117 aa8.27□□□□□ -1.09
Upf3b-201ENSMUST00000076265 Slc18a1Q8R090 521 aa8.27□□□□□ -1.09
Retrieved 100 of 22,080 RNA–protein pairs in 54.7 ms