RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Gm8332Q3UTA4 144 aa13.82□□□□□ -0.2
Nup54-201ENSMUST00000038514 PfplQ5RKV8 702 aa13.82□□□□□ -0.2
Nup54-201ENSMUST00000038514 Xrcc1Q60596 631 aa13.82□□□□□ -0.2
Nup54-201ENSMUST00000038514 Il10rbQ61190 349 aa13.82□□□□□ -0.2
Nup54-201ENSMUST00000038514 Sntb2Q61235 520 aa13.82□□□□□ -0.2
Nup54-201ENSMUST00000038514 Klhl6Q6V595 619 aa13.82□□□□□ -0.2
Nup54-201ENSMUST00000038514 Tdpoz5Q6YCH1 340 aa13.82□□□□□ -0.2
Nup54-201ENSMUST00000038514 Fbxo34Q80XI1 695 aa13.82□□□□□ -0.2
Nup54-201ENSMUST00000038514 Slc30a8Q8BGG0 367 aa13.82□□□□□ -0.2
Nup54-201ENSMUST00000038514 Flrt3Q8BGT1 649 aa13.82□□□□□ -0.2
Nup54-201ENSMUST00000038514 Gpr107Q8BUV8 551 aa13.82□□□□□ -0.2
Nup54-201ENSMUST00000038514 DutQ8VCG1 200 aaKnown RBP13.82□□□□□ -0.2
Nup54-201ENSMUST00000038514 SgtbQ8VD33 304 aa13.82□□□□□ -0.2
Nup54-201ENSMUST00000038514 Zmynd19Q9CQG3 227 aa13.82□□□□□ -0.2
Nup54-201ENSMUST00000038514 Hcfc1r1Q9CYQ5 120 aa13.82□□□□□ -0.2
Nup54-201ENSMUST00000038514 Mpc2Q9D023 127 aa13.82□□□□□ -0.2
Nup54-201ENSMUST00000038514 BambiQ9D0L6 260 aa13.82□□□□□ -0.2
Nup54-201ENSMUST00000038514 4930447A16RikQ9D5F6 132 aa13.82□□□□□ -0.2
Nup54-201ENSMUST00000038514 Prl8a1Q9DAV8 240 aa13.82□□□□□ -0.2
Nup54-201ENSMUST00000038514 Gstk1Q9DCM2 226 aa13.82□□□□□ -0.2
Nup54-201ENSMUST00000038514 Igkv15-103A0A140T8P3 115 aa13.81□□□□□ -0.2
Nup54-201ENSMUST00000038514 Tmem235B1AQL3 211 aa13.81□□□□□ -0.2
Nup54-201ENSMUST00000038514 Fam84bD3YXJ5 310 aa13.81□□□□□ -0.2
Nup54-201ENSMUST00000038514 P03987 398 aa13.81□□□□□ -0.2
Nup54-201ENSMUST00000038514 Tmco2P0C1V4 183 aa13.81□□□□□ -0.2
Nup54-201ENSMUST00000038514 Fcer1aP20489 250 aa13.81□□□□□ -0.2
Nup54-201ENSMUST00000038514 Itgb7P26011 806 aa13.81□□□□□ -0.2
Nup54-201ENSMUST00000038514 Rps15aP62245 130 aaKnown RBP13.81□□□□□ -0.2
Nup54-201ENSMUST00000038514 DtymkP97930 212 aa13.81□□□□□ -0.2
Nup54-201ENSMUST00000038514 Khdc4Q3TCX3 612 aa13.81□□□□□ -0.2
Nup54-201ENSMUST00000038514 ArsgQ3TYD4 525 aa13.81□□□□□ -0.2
Nup54-201ENSMUST00000038514 Lhfpl5Q4KL25 219 aa13.81□□□□□ -0.2
Nup54-201ENSMUST00000038514 Ppp5cQ60676 499 aa13.81□□□□□ -0.2
Nup54-201ENSMUST00000038514 Frg2f1Q6P3A2 227 aa13.81□□□□□ -0.2
Nup54-201ENSMUST00000038514 Olfr699Q7TRN3 316 aa13.81□□□□□ -0.2
Nup54-201ENSMUST00000038514 Impad1Q80V26 356 aa13.81□□□□□ -0.2
Nup54-201ENSMUST00000038514 Gadl1Q80WP8 550 aa13.81□□□□□ -0.2
Nup54-201ENSMUST00000038514 Adam30Q811Q3 732 aa13.81□□□□□ -0.2
Nup54-201ENSMUST00000038514 ShfQ8CG80 238 aa13.81□□□□□ -0.2
Nup54-201ENSMUST00000038514 Mmp28Q8CGV8 520 aa13.81□□□□□ -0.2
Nup54-201ENSMUST00000038514 NraddQ8CJ26 228 aa13.81□□□□□ -0.2
Nup54-201ENSMUST00000038514 GmdsQ8K0C9 372 aa13.81□□□□□ -0.2
Nup54-201ENSMUST00000038514 Ccdc115Q8VE99 180 aaKnown RBP13.81□□□□□ -0.2
Nup54-201ENSMUST00000038514 Mrgpra1Q91WW5 304 aa13.81□□□□□ -0.2
Nup54-201ENSMUST00000038514 Mrps16Q9CPX7 135 aaKnown RBP13.81□□□□□ -0.2
Nup54-201ENSMUST00000038514 Coq5Q9CXI0 327 aa13.81□□□□□ -0.2
Nup54-201ENSMUST00000038514 Q9D1F3 157 aa13.81□□□□□ -0.2
Nup54-201ENSMUST00000038514 Actr6Q9D864 396 aa13.81□□□□□ -0.2
Nup54-201ENSMUST00000038514 Derl3Q9D8K3 228 aa13.81□□□□□ -0.2
Nup54-201ENSMUST00000038514 C1qtnf2Q9D8U4 294 aa13.81□□□□□ -0.2
Nup54-201ENSMUST00000038514 Eif3kQ9DBZ5 218 aa13.81□□□□□ -0.2
Nup54-201ENSMUST00000038514 Lypd2Q9DD23 127 aa13.81□□□□□ -0.2
Nup54-201ENSMUST00000038514 NfkbiaQ9Z1E3 314 aa13.81□□□□□ -0.2
Nup54-201ENSMUST00000038514 Cyp4a32A2A8T1 509 aa13.81□□□□□ -0.2
Nup54-201ENSMUST00000038514 Zfp735B1ARH2 734 aa13.81□□□□□ -0.2
Nup54-201ENSMUST00000038514 Gm8906L7N2A2 181 aa13.81□□□□□ -0.2
Nup54-201ENSMUST00000038514 AurkcO88445 282 aa13.81□□□□□ -0.2
Nup54-201ENSMUST00000038514 H2-Q7P14429 334 aa13.81□□□□□ -0.2
Nup54-201ENSMUST00000038514 Rplp0P14869 317 aa13.81□□□□□ -0.2
Nup54-201ENSMUST00000038514 Spi1P17433 272 aa13.81□□□□□ -0.2
Nup54-201ENSMUST00000038514 Tbxa2rP30987 341 aa13.81□□□□□ -0.2
Nup54-201ENSMUST00000038514 Acyp2P56375 106 aa13.81□□□□□ -0.2
Nup54-201ENSMUST00000038514 DmwdQ08274 665 aa13.81□□□□□ -0.2
Nup54-201ENSMUST00000038514 Olfr1428Q0VDY1 314 aa13.81□□□□□ -0.2
Nup54-201ENSMUST00000038514 D11Wsu47eQ6PIX9 558 aa13.81□□□□□ -0.2
Nup54-201ENSMUST00000038514 Eci3Q78JN3 317 aa13.81□□□□□ -0.2
Nup54-201ENSMUST00000038514 Atg4dQ8BGV9 474 aa13.81□□□□□ -0.2
Nup54-201ENSMUST00000038514 Znf770Q8BIQ8 705 aa13.81□□□□□ -0.2
Nup54-201ENSMUST00000038514 Kbtbd11Q8BNW9 633 aa13.81□□□□□ -0.2
Nup54-201ENSMUST00000038514 Pi15Q8BS03 258 aa13.81□□□□□ -0.2
Nup54-201ENSMUST00000038514 Lats1Q8BYR2 1129 aa13.81□□□□□ -0.2
Nup54-201ENSMUST00000038514 Etv3Q8R4Z4 513 aa13.81□□□□□ -0.2
Nup54-201ENSMUST00000038514 Olfr583Q8VG25 319 aa13.81□□□□□ -0.2
Nup54-201ENSMUST00000038514 Eps8l3Q91WL0 600 aa13.81□□□□□ -0.2
Nup54-201ENSMUST00000038514 Mat1aQ91X83 396 aaKnown RBP13.81□□□□□ -0.2
Nup54-201ENSMUST00000038514 Emc3Q99KI3 261 aa13.81□□□□□ -0.2
Nup54-201ENSMUST00000038514 Pfn4Q9D6I3 129 aa13.81□□□□□ -0.2
Nup54-201ENSMUST00000038514 DiabloQ9JIQ3 237 aa13.81□□□□□ -0.2
Nup54-201ENSMUST00000038514 PpieQ9QZH3 301 aaKnown RBP13.81□□□□□ -0.2
Nup54-201ENSMUST00000038514 AI182371A2AS37 356 aa13.8□□□□□ -0.2
Nup54-201ENSMUST00000038514 Prr23a2D3YWX5 253 aa13.8□□□□□ -0.2
Nup54-201ENSMUST00000038514 Prl4a1O35256 227 aa13.8□□□□□ -0.2
Nup54-201ENSMUST00000038514 Dok2O70469 412 aa13.8□□□□□ -0.2
Nup54-201ENSMUST00000038514 PnpP23492 289 aa13.8□□□□□ -0.2
Nup54-201ENSMUST00000038514 Pou3f4P62515 361 aa13.8□□□□□ -0.2
Nup54-201ENSMUST00000038514 Tnfrsf26P83626 204 aa13.8□□□□□ -0.2
Nup54-201ENSMUST00000038514 Trp53i11Q4QQM4 189 aa13.8□□□□□ -0.2
Nup54-201ENSMUST00000038514 Smad2Q62432 467 aa13.8□□□□□ -0.2
Nup54-201ENSMUST00000038514 RgmaQ6PCX7 454 aa13.8□□□□□ -0.2
Nup54-201ENSMUST00000038514 Ddhd2Q80Y98 699 aa13.8□□□□□ -0.2
Nup54-201ENSMUST00000038514 Mettl27Q8BGM4 238 aa13.8□□□□□ -0.2
Nup54-201ENSMUST00000038514 Coro2bQ8BH44 480 aa13.8□□□□□ -0.2
Nup54-201ENSMUST00000038514 Gper1Q8BMP4 375 aa13.8□□□□□ -0.2
Nup54-201ENSMUST00000038514 AgmoQ8BS35 447 aa13.8□□□□□ -0.2
Nup54-201ENSMUST00000038514 Pomgnt2Q8BW41 605 aa13.8□□□□□ -0.2
Nup54-201ENSMUST00000038514 ReltQ8BX43 436 aa13.8□□□□□ -0.2
Nup54-201ENSMUST00000038514 Spata33Q8C624 132 aa13.8□□□□□ -0.2
Nup54-201ENSMUST00000038514 Lsm10Q8QZX5 122 aa13.8□□□□□ -0.2
Nup54-201ENSMUST00000038514 Col26a1Q91VF6 440 aa13.8□□□□□ -0.2
Nup54-201ENSMUST00000038514 Nkiras2Q9CR56 191 aa13.8□□□□□ -0.2
Retrieved 100 of 22,080 RNA–protein pairs in 40.3 ms