RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Sec24bQ80ZX0 1251 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Fbxo45Q8K3B1 286 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Zmynd11Q8R5C8 602 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Gipc3Q8R5M0 297 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Olfr478Q8VG04 314 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Olfr1280Q8VGG8 305 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Chp2Q9D869 196 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Pnp2Q9D8C9 305 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Fn3kQ9ER35 309 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 GltpQ9JL62 209 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Igkv16-104A0A0B4J1I1 116 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 A0A1L1SV24 88 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 4930451I11RikE9Q9R3 111 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 P06336 421 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 StsP50427 624 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Sox9Q04887 507 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Mtf1Q07243 675 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Znf235Q61116 645 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 SynprQ8BGN8 265 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 PcgF3Q8BTQ0 241 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Lrfn5Q8BXA0 719 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Adam4Q8CGQ2 763 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 WrbQ8K0D7 174 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 SptssaQ8R207 71 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Dnajc24Q91ZF0 196 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Slc25a30Q9CR58 291 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Slc7a11Q9WTR6 502 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Megf6Q80V70 1572 aa9.59□□□□□ -0.87
Ccdc40-201ENSMUST00000035935 Rhox2bA2A447 191 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Scn1aA2APX8 2009 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Rhox2cA2AWL9 191 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Zfp384E9Q1A5 584 aaKnown RBP9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Sult3a2G5E904 293 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Dbil5O09035 87 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 IghmP01872 454 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Cyr61P18406 379 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Cd82P40237 266 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Cnr2P47936 347 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Efna1P52793 205 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 NfkbidQ2TB02 327 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 UnklQ5FWH2 727 aaKnown RBP9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Tbccd1Q640P7 552 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Ffar4Q7TMA4 361 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Tmem30aQ8VEK0 364 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Olfr870Q8VGG4 311 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Wasf3Q8VHI6 501 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Aqp9Q9JJJ3 295 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Trav6-7-dv9A0A075B639 125 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 BC025446A0A087WQT1 134 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Fam136b-psA0A140T8T1 138 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Gm21972J3QN38 98 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Gm11168J3QN50 228 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Mmp12P34960 473 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Emp1P47801 160 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Ankub1Q3UUE9 192 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Olfr146Q60884 306 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 ManeaQ6NXH2 462 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Sox11Q7M6Y2 395 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Olfr1134Q7TR43 312 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Olfr1133Q7TR44 313 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Hapln3Q80WM5 359 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Chst8Q8BQ86 417 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Defb36Q8K3U4 67 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Vmn1r83Q8R287 306 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Olfr1090Q8VGA6 313 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 TardbpQ921F2 414 aaKnown RBP9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 AspnQ99MQ4 373 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Ift22Q9DAI2 185 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Tmem201A2A8U2 664 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Htr1bP28334 386 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Rpl18P35980 188 aaKnown RBP9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Zic1P46684 447 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Rab3aP63011 220 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Pgap1Q3UUQ7 922 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Carns1Q6ZPS2 827 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Znf516Q7TSH3 1157 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Adamtsl4Q80T21 1036 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Wdr48Q8BH57 676 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 CcinQ8CDE2 588 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Slc31a1Q8K211 196 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Vmn1r192Q8K4C9 300 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Phospho1Q8R2H9 267 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Irf2bp1Q8R3Y8 584 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Olfr558Q8VGZ7 317 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Sfxn2Q925N2 322 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Bcl2l14Q9CPT0 328 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Lhfpl3Q9CTN8 222 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Ca13Q9D6N1 262 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Sphk2Q9JIA7 617 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Vmn1r90A0A087WR36 309 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 P01665 111 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 P01666 111 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Tcf3P15806 651 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Pcsk4P29121 655 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Rpl19P84099 196 aaKnown RBP9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Amz2Q400C8 359 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 BC061237Q6P8I2 184 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Ccdc36Q6PDM4 574 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Cpt1cQ8BGD5 798 aa9.58□□□□□ -0.88
Ccdc40-201ENSMUST00000035935 Cdk5rap1Q8BTW8 588 aa9.58□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 10.7 ms