RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Rap1bQ99JI6 184 aa13.12□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Cacng3Q9JJV5 315 aa13.12□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Drd4P51436 387 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Zdhhc2P59267 366 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 NfybP63139 207 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 St3gal3P97325 374 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Slc5a10Q5SWY8 596 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Olfr1318Q7TQW6 320 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Chrnb4Q8R493 495 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Olfr1317Q8VF84 316 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Rtl8bQ9D1F0 113 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Vmn1r29Q9EQ41 303 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Olfr944Q9EQ91 311 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Kiaa1324A2AFS3 1009 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Vmn2r76E9Q3F5 853 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 PmchP56942 165 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Gja5Q01231 358 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Dmrtc1bQ2PMX6 267 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Cpa4Q6P8K8 420 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Poldip3Q8BG81 420 aaKnown RBP13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Tmem11Q8BK08 190 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Hint3Q9CPS6 165 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 NanpQ9CPT3 248 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 P01881 257 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 P01882 290 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Znf271P15620 580 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 PahP16331 453 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Pcgf2P23798 342 aaKnown RBP13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Hsd3b3P26150 373 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Sumo1P63166 101 aaKnown RBP13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Kcnk6Q3TBV4 313 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Ugt2b36Q3UEP4 530 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Znf185Q62394 352 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Sec24bQ80ZX0 1251 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 1700020N01RikQ8CF20 87 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Vmn1r189Q8K3N3 312 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Kiaa0513Q8R0A7 407 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Slc22a26Q91WJ2 552 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Dmbx1Q91ZK4 381 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Olfr872E9PVW2 323 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Sec61a1P61620 476 aaKnown RBP13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 ElocP83940 112 aaKnown RBP13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Nsg1Q62092 185 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Gpc2Q8BKV1 579 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 CebpzosQ8BTE5 80 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Tmem234Q8R1E7 140 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Olfr812Q8VG64 310 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Pcyt2Q922E4 404 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Tspan11Q9D1D1 253 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 GabarapQ9DCD6 117 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Jag2Q9QYE5 1247 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Gm765B2RVL9 189 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Pcdh17E9PXF0 1157 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Sypl1O09117 261 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 CcnfP51944 777 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Nme2Q01768 152 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Tsr3Q5HZH2 323 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Usp17laQ61068 526 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Zfp455Q7M6X9 461 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Trnp1Q80ZI1 223 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 DhrsxQ8VBZ0 335 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Thap7Q8VCZ3 309 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 F11Q91Y47 624 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Gpr146Q99LE2 333 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Cpn2Q9DBB9 547 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 H2-T10F6T1I5 379 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Nudt19P11930 357 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 BdnfP21237 249 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Emc10Q3TAS6 258 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Gm14226Q3TZL0 686 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Lyg2Q3V1I0 213 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Dtx3Q80V91 347 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 ClmpQ8R373 373 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 VapaQ9WV55 249 aaKnown RBP13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 RttnQ8R4Y8 2226 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Gm597E9Q8J5 896 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Zfp760E9QAF5 666 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Esp36G3UZD8 160 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Olfr1428Q0VDY1 314 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Glt8d1Q6NSU3 371 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Katnb1Q8BG40 658 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Yod1Q8CB27 343 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Olfr736Q8VFT6 312 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Timm22Q9CQ85 194 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Q9D1Z2 194 aa13.11□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Olfr1532-ps1A0A0R4J8U2 307 aa13.1□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Olfr707K7N662 307 aa13.1□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Ring1O35730 406 aa13.1□□□□□ -0.31
Col5a1-201ENSMUST00000028280 SncaO55042 140 aaKnown RBP13.1□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Malt1Q2TBA3 832 aa13.1□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Gcnt7Q3V3K7 433 aa13.1□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Tas2r113Q7M711 309 aa13.1□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Klhl13Q80TF4 654 aa13.1□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Tgm4Q8BZH1 670 aa13.1□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Olfr945Q9EQB5 319 aa13.1□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Rsc1a1Q9ER99 582 aa13.1□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Adamts5Q9R001 930 aa13.1□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Tox2A2A472 547 aa13.1□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Tcte1A6H639 498 aa13.1□□□□□ -0.31
Col5a1-201ENSMUST00000028280 Vmn1r55E9Q8I6 310 aa13.1□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 38.2 ms